RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
CHPT1-203ENST00000546873 PTK2Q05397 1052 aa12.28□□□□□ -0.44
CHPT1-203ENST00000546873 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
CHPT1-203ENST00000546873 TRIM47Q96LD4 638 aa12.28□□□□□ -0.44
CHPT1-203ENST00000546873 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.44
CHPT1-203ENST00000546873 MAP4K5Q9Y4K4 846 aa12.27□□□□□ -0.45
CHPT1-203ENST00000546873 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
CHPT1-203ENST00000546873 ERFEQ4G0M1 354 aa12.26□□□□□ -0.45
CHPT1-203ENST00000546873 SLC10A4Q96EP9 437 aa12.26□□□□□ -0.45
CHPT1-203ENST00000546873 GPSM3Q9Y4H4 160 aa12.26□□□□□ -0.45
CHPT1-203ENST00000546873 SCARF1Q14162 830 aa12.25□□□□□ -0.45
CHPT1-203ENST00000546873 CDV3Q9UKY7 258 aaKnown RBP12.25□□□□□ -0.45
CHPT1-203ENST00000546873 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
CHPT1-203ENST00000546873 RIMBP3CA6NJZ7 1639 aa12.24□□□□□ -0.45
CHPT1-203ENST00000546873 RIMBP3BA6NNM3 1639 aa12.24□□□□□ -0.45
CHPT1-203ENST00000546873 BMP1P13497 986 aa12.24□□□□□ -0.45
CHPT1-203ENST00000546873 TIMP2P16035 220 aa12.24□□□□□ -0.45
CHPT1-203ENST00000546873 FSHRP23945 695 aa12.24□□□□□ -0.45
CHPT1-203ENST00000546873 GRM5P41594 1212 aa12.24□□□□□ -0.45
CHPT1-203ENST00000546873 RIMBP3Q9UFD9 1639 aa12.24□□□□□ -0.45
CHPT1-203ENST00000546873 WDR62O43379 1518 aa12.23□□□□□ -0.45
CHPT1-203ENST00000546873 ZIC2O95409 532 aaPredicted RBP12.22□□□□□ -0.45
CHPT1-203ENST00000546873 HMX1Q9NP08 348 aaPredicted RBP12.22□□□□□ -0.45
CHPT1-203ENST00000546873 SNRPBP14678 240 aaKnown RBP12.21□□□□□ -0.45
CHPT1-203ENST00000546873 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.45
CHPT1-203ENST00000546873 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
CHPT1-203ENST00000546873 UPP2O95045 317 aa12.2□□□□□ -0.46
CHPT1-203ENST00000546873 NR3C2P08235 984 aa12.2□□□□□ -0.46
CHPT1-203ENST00000546873 CCDC116Q8IYX3 515 aa12.2□□□□□ -0.46
CHPT1-203ENST00000546873 EPS8L1Q8TE68 723 aa12.2□□□□□ -0.46
CHPT1-203ENST00000546873 MRPL14Q6P1L8 145 aaKnown RBP12.19□□□□□ -0.46
CHPT1-203ENST00000546873 ITPKCQ96DU7 683 aa12.19□□□□□ -0.46
CHPT1-203ENST00000546873 ADAM32Q8TC27 787 aa12.18□□□□□ -0.46
CHPT1-203ENST00000546873 KLF16Q9BXK1 252 aaPredicted RBP12.18□□□□□ -0.46
CHPT1-203ENST00000546873 ZFAND3Q9H8U3 227 aa12.18□□□□□ -0.46
CHPT1-203ENST00000546873 APBB1O00213 710 aa12.17□□□□□ -0.46
CHPT1-203ENST00000546873 DHX9Q08211 1270 aaKnown RBP12.17□□□□□ -0.46
CHPT1-203ENST00000546873 BANK1Q8NDB2 785 aa12.17□□□□□ -0.46
CHPT1-203ENST00000546873 KCTD15Q96SI1 283 aaPredicted RBP12.17□□□□□ -0.46
CHPT1-203ENST00000546873 PGPEP1Q9NXJ5 209 aa12.17□□□□□ -0.46
CHPT1-203ENST00000546873 NBPF20Q3BBV1 942 aa12.16□□□□□ -0.46
CHPT1-203ENST00000546873 DZIP3Q86Y13 1208 aaKnown RBP12.16□□□□□ -0.46
CHPT1-203ENST00000546873 ZFP42Q96MM3 310 aa12.16□□□□□ -0.46
CHPT1-203ENST00000546873 PURBQ96QR8 312 aaKnown RBP12.15□□□□□ -0.46
CHPT1-203ENST00000546873 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
CHPT1-203ENST00000546873 SUPT5HO00267 1087 aaKnown RBP12.14□□□□□ -0.47
CHPT1-203ENST00000546873 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
CHPT1-203ENST00000546873 TRIM34Q9BYJ4 488 aa12.14□□□□□ -0.47
CHPT1-203ENST00000546873 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
CHPT1-203ENST00000546873 WFS1O76024 890 aa12.12□□□□□ -0.47
CHPT1-203ENST00000546873 PPP1R26Q5T8A7 1209 aaPredicted RBP12.12□□□□□ -0.47
CHPT1-203ENST00000546873 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
CHPT1-203ENST00000546873 BMP2P12643 396 aa12.11□□□□□ -0.47
CHPT1-203ENST00000546873 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
CHPT1-203ENST00000546873 C6orf118Q5T5N4 469 aa12.11□□□□□ -0.47
CHPT1-203ENST00000546873 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
CHPT1-203ENST00000546873 PEG3Q9GZU2 1588 aa12.1□□□□□ -0.47
CHPT1-203ENST00000546873 ZBBXA8MT70 800 aa12.1□□□□□ -0.47
CHPT1-203ENST00000546873 MEIOBQ8N635 442 aa12.1□□□□□ -0.47
CHPT1-203ENST00000546873 OCSTAMPQ9BR26 566 aa12.1□□□□□ -0.47
CHPT1-203ENST00000546873 TSEN34Q9BSV6 310 aaKnown RBP12.1□□□□□ -0.47
CHPT1-203ENST00000546873 TERTO14746 1132 aaKnown RBP12.09□□□□□ -0.47
CHPT1-203ENST00000546873 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
CHPT1-203ENST00000546873 SOCS7O14512 581 aa12.08□□□□□ -0.48
CHPT1-203ENST00000546873 INTS6LQ5JSJ4 861 aaKnown RBP12.08□□□□□ -0.48
CHPT1-203ENST00000546873 LINC00528Q8N1L1 170 aa12.08□□□□□ -0.48
CHPT1-203ENST00000546873 ZNF592Q92610 1267 aa12.08□□□□□ -0.48
CHPT1-203ENST00000546873 GJD4Q96KN9 370 aaPredicted RBP12.08□□□□□ -0.48
CHPT1-203ENST00000546873 PRM3Q9NNZ6 103 aa12.08□□□□□ -0.48
CHPT1-203ENST00000546873 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
CHPT1-203ENST00000546873 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
CHPT1-203ENST00000546873 MAN1A2O60476 641 aa12.07□□□□□ -0.48
CHPT1-203ENST00000546873 NDUFB9Q9Y6M9 179 aa12.07□□□□□ -0.48
CHPT1-203ENST00000546873 RAB15P59190 212 aa12.06□□□□□ -0.48
CHPT1-203ENST00000546873 NXF1Q9UBU9 619 aaKnown RBP12.06□□□□□ -0.48
CHPT1-203ENST00000546873 PCDHB9Q9Y5E1 797 aa12.06□□□□□ -0.48
CHPT1-203ENST00000546873 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
CHPT1-203ENST00000546873 MTMR14Q8NCE2 650 aa12.03□□□□□ -0.48
CHPT1-203ENST00000546873 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
CHPT1-203ENST00000546873 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.48
CHPT1-203ENST00000546873 FBXO45P0C2W1 286 aa12.02□□□□□ -0.49
CHPT1-203ENST00000546873 MCCD1P59942 119 aaPredicted RBP12.02□□□□□ -0.49
CHPT1-203ENST00000546873 NR1H3Q13133 447 aa12.02□□□□□ -0.49
CHPT1-203ENST00000546873 NPAS3Q8IXF0 933 aa12.02□□□□□ -0.49
CHPT1-203ENST00000546873 SEPT12Q8IYM1 358 aa12.02□□□□□ -0.49
CHPT1-203ENST00000546873 SNRKQ9NRH2 765 aa12.02□□□□□ -0.49
CHPT1-203ENST00000546873 CBLBQ13191 982 aa12.01□□□□□ -0.49
CHPT1-203ENST00000546873 Q6ZVU0 165 aa12.01□□□□□ -0.49
CHPT1-203ENST00000546873 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
CHPT1-203ENST00000546873 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
CHPT1-203ENST00000546873 CCDC125Q86Z20 511 aa12□□□□□ -0.49
CHPT1-203ENST00000546873 ESPNB1AK53 854 aa11.99□□□□□ -0.49
CHPT1-203ENST00000546873 RNF20Q5VTR2 975 aa11.99□□□□□ -0.49
CHPT1-203ENST00000546873 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
CHPT1-203ENST00000546873 ERVH48-1M5A8F1 160 aa11.98□□□□□ -0.49
CHPT1-203ENST00000546873 TTLL8A6PVC2 850 aa11.97□□□□□ -0.49
CHPT1-203ENST00000546873 SOBPA7XYQ1 873 aa11.97□□□□□ -0.49
CHPT1-203ENST00000546873 TMPRSS4Q9NRS4 437 aa11.97□□□□□ -0.49
CHPT1-203ENST00000546873 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.49
CHPT1-203ENST00000546873 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms