RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 LMOD1P29536 600 aaPredicted RBP11.42□□□□□ -0.58
NPAS3-204ENST00000546849 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
NPAS3-204ENST00000546849 TFIP11Q9UBB9 837 aaKnown RBP11.42□□□□□ -0.58
NPAS3-204ENST00000546849 CDV3Q9UKY7 258 aaKnown RBP11.42□□□□□ -0.58
NPAS3-204ENST00000546849 DGAT1O75907 488 aa11.41□□□□□ -0.58
NPAS3-204ENST00000546849 MYT1Q01538 1121 aa11.41□□□□□ -0.58
NPAS3-204ENST00000546849 ZNF787Q6DD87 383 aa11.41□□□□□ -0.58
NPAS3-204ENST00000546849 UCN2Q96RP3 112 aa11.41□□□□□ -0.58
NPAS3-204ENST00000546849 CEP126Q9P2H0 1117 aa11.41□□□□□ -0.58
NPAS3-204ENST00000546849 ACIN1Q9UKV3 1341 aaKnown RBP11.4□□□□□ -0.58
NPAS3-204ENST00000546849 TNFRSF10AO00220 468 aa11.4□□□□□ -0.58
NPAS3-204ENST00000546849 ATP9BO43861 1147 aa11.4□□□□□ -0.58
NPAS3-204ENST00000546849 PPP1R15AO75807 674 aaPredicted RBP11.4□□□□□ -0.58
NPAS3-204ENST00000546849 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
NPAS3-204ENST00000546849 PKDCCQ504Y2 493 aa11.39□□□□□ -0.59
NPAS3-204ENST00000546849 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
NPAS3-204ENST00000546849 TBC1D9Q6ZT07 1266 aa11.39□□□□□ -0.59
NPAS3-204ENST00000546849 NFATC2IPQ8NCF5 419 aa11.39□□□□□ -0.59
NPAS3-204ENST00000546849 C4orf48Q5BLP8 95 aa11.38□□□□□ -0.59
NPAS3-204ENST00000546849 PBXIP1Q96AQ6 731 aa11.38□□□□□ -0.59
NPAS3-204ENST00000546849 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
NPAS3-204ENST00000546849 PIK3CDO00329 1044 aa11.37□□□□□ -0.59
NPAS3-204ENST00000546849 ARID5BQ14865 1188 aa11.37□□□□□ -0.59
NPAS3-204ENST00000546849 C1QTNF2Q9BXJ5 285 aa11.37□□□□□ -0.59
NPAS3-204ENST00000546849 MAFBQ9Y5Q3 323 aaPredicted RBP11.37□□□□□ -0.59
NPAS3-204ENST00000546849 SKOR1P84550 965 aa11.36□□□□□ -0.59
NPAS3-204ENST00000546849 CFAP70Q5T0N1 1121 aa11.36□□□□□ -0.59
NPAS3-204ENST00000546849 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
NPAS3-204ENST00000546849 VASH1Q7L8A9 365 aaPredicted RBP11.36□□□□□ -0.59
NPAS3-204ENST00000546849 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
NPAS3-204ENST00000546849 RAB15P59190 212 aa11.35□□□□□ -0.59
NPAS3-204ENST00000546849 TRMT44Q8IYL2 757 aaKnown RBP11.35□□□□□ -0.59
NPAS3-204ENST00000546849 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-204ENST00000546849 USP17L3A6NCW0 530 aa11.34□□□□□ -0.59
NPAS3-204ENST00000546849 USP17L4A6NCW7 530 aa11.34□□□□□ -0.59
NPAS3-204ENST00000546849 USP17L2Q6R6M4 530 aa11.34□□□□□ -0.59
NPAS3-204ENST00000546849 USP17L1Q7RTZ2 530 aa11.34□□□□□ -0.59
NPAS3-204ENST00000546849 PLPP7Q8NBV4 271 aa11.34□□□□□ -0.59
NPAS3-204ENST00000546849 DOLKQ9UPQ8 538 aa11.34□□□□□ -0.59
NPAS3-204ENST00000546849 FAM187AA6NFU0 413 aa11.33□□□□□ -0.6
NPAS3-204ENST00000546849 GIGYF1O75420 1035 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-204ENST00000546849 FOXC1Q12948 553 aa11.33□□□□□ -0.6
NPAS3-204ENST00000546849 MAP7D1Q3KQU3 841 aa11.33□□□□□ -0.6
NPAS3-204ENST00000546849 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.6
NPAS3-204ENST00000546849 EML3Q32P44 896 aa11.32□□□□□ -0.6
NPAS3-204ENST00000546849 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
NPAS3-204ENST00000546849 DEPDC4Q8N2C3 294 aa11.32□□□□□ -0.6
NPAS3-204ENST00000546849 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
NPAS3-204ENST00000546849 KCTD15Q96SI1 283 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-204ENST00000546849 VRTNQ9H8Y1 702 aa11.32□□□□□ -0.6
NPAS3-204ENST00000546849 POTECB2RU33 542 aa11.31□□□□□ -0.6
NPAS3-204ENST00000546849 SEPT12Q8IYM1 358 aa11.31□□□□□ -0.6
NPAS3-204ENST00000546849 LZTS3O60299 673 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-204ENST00000546849 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
NPAS3-204ENST00000546849 NCOA4Q13772 614 aa11.3□□□□□ -0.6
NPAS3-204ENST00000546849 CDCA8Q53HL2 280 aa11.3□□□□□ -0.6
NPAS3-204ENST00000546849 OXLD1Q5BKU9 147 aa11.3□□□□□ -0.6
NPAS3-204ENST00000546849 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-204ENST00000546849 MAP4K5Q9Y4K4 846 aa11.3□□□□□ -0.6
NPAS3-204ENST00000546849 PCDHB11Q9Y5F2 797 aa11.3□□□□□ -0.6
NPAS3-204ENST00000546849 WNT7AO00755 349 aa11.29□□□□□ -0.6
NPAS3-204ENST00000546849 PDIA4P13667 645 aaKnown RBP11.29□□□□□ -0.6
NPAS3-204ENST00000546849 PDE4CQ08493 712 aa11.29□□□□□ -0.6
NPAS3-204ENST00000546849 PLEKHM2Q8IWE5 1019 aa11.29□□□□□ -0.6
NPAS3-204ENST00000546849 SIRT1Q96EB6 747 aa11.29□□□□□ -0.6
NPAS3-204ENST00000546849 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
NPAS3-204ENST00000546849 FSHRP23945 695 aa11.28□□□□□ -0.6
NPAS3-204ENST00000546849 TOR4AQ9NXH8 423 aa11.28□□□□□ -0.6
NPAS3-204ENST00000546849 DHX9Q08211 1270 aaKnown RBP11.27□□□□□ -0.61
NPAS3-204ENST00000546849 LARP1Q6PKG0 1096 aaKnown RBP11.27□□□□□ -0.61
NPAS3-204ENST00000546849 TRIM50Q86XT4 487 aa11.27□□□□□ -0.61
NPAS3-204ENST00000546849 PHTF2Q8N3S3 785 aa11.27□□□□□ -0.61
NPAS3-204ENST00000546849 AAASQ9NRG9 546 aa11.27□□□□□ -0.61
NPAS3-204ENST00000546849 NOD1Q9Y239 953 aa11.27□□□□□ -0.61
NPAS3-204ENST00000546849 ATP5J2-PTCD1G3V325 749 aa11.26□□□□□ -0.61
NPAS3-204ENST00000546849 ST8SIA5O15466 376 aa11.26□□□□□ -0.61
NPAS3-204ENST00000546849 MYCP01106 439 aaPredicted RBP11.26□□□□□ -0.61
NPAS3-204ENST00000546849 MRGPRX2Q96LB1 330 aa11.26□□□□□ -0.61
NPAS3-204ENST00000546849 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
NPAS3-204ENST00000546849 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
NPAS3-204ENST00000546849 ESPNB1AK53 854 aa11.25□□□□□ -0.61
NPAS3-204ENST00000546849 INTS6LQ5JSJ4 861 aaKnown RBP11.25□□□□□ -0.61
NPAS3-204ENST00000546849 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
NPAS3-204ENST00000546849 CCDC85AQ96PX6 553 aaPredicted RBP11.25□□□□□ -0.61
NPAS3-204ENST00000546849 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
NPAS3-204ENST00000546849 RASA1P20936 1047 aa11.24□□□□□ -0.61
NPAS3-204ENST00000546849 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
NPAS3-204ENST00000546849 PSME1Q06323 249 aa11.24□□□□□ -0.61
NPAS3-204ENST00000546849 USP4Q13107 963 aa11.24□□□□□ -0.61
NPAS3-204ENST00000546849 ADH1CP00326 375 aa11.23□□□□□ -0.61
NPAS3-204ENST00000546849 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
NPAS3-204ENST00000546849 AVPP01185 164 aa11.23□□□□□ -0.61
NPAS3-204ENST00000546849 CDK15Q96Q40 435 aa11.23□□□□□ -0.61
NPAS3-204ENST00000546849 NR5A1Q13285 461 aa11.22□□□□□ -0.61
NPAS3-204ENST00000546849 MPNDQ8N594 471 aa11.22□□□□□ -0.61
NPAS3-204ENST00000546849 TTC24A2A3L6 582 aaPredicted RBP11.21□□□□□ -0.61
NPAS3-204ENST00000546849 ATG7O95352 703 aa11.21□□□□□ -0.61
NPAS3-204ENST00000546849 CCDC116Q8IYX3 515 aa11.21□□□□□ -0.61
NPAS3-204ENST00000546849 CYP4X1Q8N118 509 aa11.21□□□□□ -0.61
NPAS3-204ENST00000546849 CRIPAKQ8N1N5 446 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms