RNA–Protein interactions for RNA: ENST00000546546.1

NOVA1-207, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-207ENST00000546546 KRT27Q7Z3Y8 459 aa18.06■□□□□ 0.48
NOVA1-207ENST00000546546 NRAPQ86VF7 1730 aa18.05■□□□□ 0.48
NOVA1-207ENST00000546546 FAM182BQ5T319 152 aa18.04■□□□□ 0.48
NOVA1-207ENST00000546546 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
NOVA1-207ENST00000546546 COL5A2P05997 1499 aaPredicted RBP18.03■□□□□ 0.48
NOVA1-207ENST00000546546 OVOS2A0A0J9YW53 1432 aa18.02■□□□□ 0.48
NOVA1-207ENST00000546546 OVOS2Q6IE36 1432 aa18.02■□□□□ 0.48
NOVA1-207ENST00000546546 NSD3Q9BZ95 1437 aa18.02■□□□□ 0.48
NOVA1-207ENST00000546546 PANK3Q9H999 370 aa18.01■□□□□ 0.47
NOVA1-207ENST00000546546 NFAT5O94916 1531 aa18.01■□□□□ 0.47
NOVA1-207ENST00000546546 WDR17Q8IZU2 1322 aa18■□□□□ 0.47
NOVA1-207ENST00000546546 AMPHP49418 695 aa18■□□□□ 0.47
NOVA1-207ENST00000546546 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
NOVA1-207ENST00000546546 BARGINQ6ZT62 677 aa18■□□□□ 0.47
NOVA1-207ENST00000546546 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
NOVA1-207ENST00000546546 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
NOVA1-207ENST00000546546 CRB1P82279 1406 aa17.99■□□□□ 0.47
NOVA1-207ENST00000546546 NLRP2Q9NX02 1062 aa17.99■□□□□ 0.47
NOVA1-207ENST00000546546 THRAP3Q9Y2W1 955 aaKnown RBP17.99■□□□□ 0.47
NOVA1-207ENST00000546546 PDE3BQ13370 1112 aa17.98■□□□□ 0.47
NOVA1-207ENST00000546546 ANKRD24Q8TF21 1146 aa17.98■□□□□ 0.47
NOVA1-207ENST00000546546 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
NOVA1-207ENST00000546546 IP6K1Q92551 441 aa17.97■□□□□ 0.47
NOVA1-207ENST00000546546 CGNL1Q0VF96 1302 aa17.97■□□□□ 0.47
NOVA1-207ENST00000546546 KIF7Q2M1P5 1343 aa17.97■□□□□ 0.47
NOVA1-207ENST00000546546 CARD10Q9BWT7 1032 aa17.96■□□□□ 0.47
NOVA1-207ENST00000546546 HOXC9P31274 260 aa17.95■□□□□ 0.46
NOVA1-207ENST00000546546 TNNT2P45379 298 aaPredicted RBP17.95■□□□□ 0.46
NOVA1-207ENST00000546546 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
NOVA1-207ENST00000546546 ERBB3P21860 1342 aa17.94■□□□□ 0.46
NOVA1-207ENST00000546546 COL18A1P39060 1754 aa17.94■□□□□ 0.46
NOVA1-207ENST00000546546 MYOM1P52179 1685 aa17.93■□□□□ 0.46
NOVA1-207ENST00000546546 PPM1GO15355 546 aaPredicted RBP17.93■□□□□ 0.46
NOVA1-207ENST00000546546 CCDC125Q86Z20 511 aa17.93■□□□□ 0.46
NOVA1-207ENST00000546546 DDB1Q16531 1140 aa17.92■□□□□ 0.46
NOVA1-207ENST00000546546 KNSTRNQ9Y448 316 aa17.91■□□□□ 0.46
NOVA1-207ENST00000546546 BRWD3Q6RI45 1802 aa17.91■□□□□ 0.46
NOVA1-207ENST00000546546 USP54Q70EL1 1684 aa17.9■□□□□ 0.46
NOVA1-207ENST00000546546 FAM196AQ6ZSG2 479 aa17.9■□□□□ 0.46
NOVA1-207ENST00000546546 DEFB132Q7Z7B7 95 aa17.9■□□□□ 0.46
NOVA1-207ENST00000546546 EMILIN1Q9Y6C2 1016 aa17.9■□□□□ 0.46
NOVA1-207ENST00000546546 THSD7AQ9UPZ6 1657 aa17.9■□□□□ 0.46
NOVA1-207ENST00000546546 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.46
NOVA1-207ENST00000546546 TRIM37O94972 964 aa17.89■□□□□ 0.45
NOVA1-207ENST00000546546 CNGB1Q14028 1251 aaPredicted RBP17.89■□□□□ 0.45
NOVA1-207ENST00000546546 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
NOVA1-207ENST00000546546 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.45
NOVA1-207ENST00000546546 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
NOVA1-207ENST00000546546 EXOC5O00471 708 aa17.88■□□□□ 0.45
NOVA1-207ENST00000546546 IL2RBP14784 551 aa17.87■□□□□ 0.45
NOVA1-207ENST00000546546 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
NOVA1-207ENST00000546546 WASHC2AQ641Q2 1341 aa17.87■□□□□ 0.45
NOVA1-207ENST00000546546 ABCC6O95255 1503 aa17.87■□□□□ 0.45
NOVA1-207ENST00000546546 RGPD5Q99666 1765 aa17.86■□□□□ 0.45
NOVA1-207ENST00000546546 USHBP1Q8N6Y0 703 aa17.86■□□□□ 0.45
NOVA1-207ENST00000546546 LTN1O94822 1766 aa17.85■□□□□ 0.45
NOVA1-207ENST00000546546 BAG6P46379 1132 aa17.85■□□□□ 0.45
NOVA1-207ENST00000546546 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
NOVA1-207ENST00000546546 POLKQ9UBT6 870 aa17.85■□□□□ 0.45
NOVA1-207ENST00000546546 RTL1A6NKG5 1358 aa17.84■□□□□ 0.45
NOVA1-207ENST00000546546 EN1Q05925 392 aaPredicted RBP17.84■□□□□ 0.45
NOVA1-207ENST00000546546 NBPF6Q5VWK0 638 aa17.84■□□□□ 0.45
NOVA1-207ENST00000546546 NBPF4Q96M43 638 aa17.84■□□□□ 0.45
NOVA1-207ENST00000546546 FLT4P35916 1363 aa17.83■□□□□ 0.45
NOVA1-207ENST00000546546 KIF20BQ96Q89 1820 aa17.83■□□□□ 0.44
NOVA1-207ENST00000546546 DISP2A7MBM2 1401 aa17.82■□□□□ 0.44
NOVA1-207ENST00000546546 APBA3O96018 575 aa17.82■□□□□ 0.44
NOVA1-207ENST00000546546 CC2D1BQ5T0F9 858 aaKnown RBP17.82■□□□□ 0.44
NOVA1-207ENST00000546546 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
NOVA1-207ENST00000546546 INSRP06213 1382 aa17.81■□□□□ 0.44
NOVA1-207ENST00000546546 DDX54Q8TDD1 881 aaKnown RBP17.81■□□□□ 0.44
NOVA1-207ENST00000546546 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
NOVA1-207ENST00000546546 NSD2O96028 1365 aa17.79■□□□□ 0.44
NOVA1-207ENST00000546546 PER1O15534 1290 aaPredicted RBP17.79■□□□□ 0.44
NOVA1-207ENST00000546546 OVOS2A0A0G2JMS6 1433 aa17.79■□□□□ 0.44
NOVA1-207ENST00000546546 KIF24Q5T7B8 1368 aa17.79■□□□□ 0.44
NOVA1-207ENST00000546546 EP400Q96L91 3159 aa17.78■□□□□ 0.44
NOVA1-207ENST00000546546 EZH2Q15910 746 aaKnown RBP17.78■□□□□ 0.44
NOVA1-207ENST00000546546 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
NOVA1-207ENST00000546546 ACSBG1Q96GR2 724 aa17.78■□□□□ 0.44
NOVA1-207ENST00000546546 PTF1AQ7RTS3 328 aa17.77■□□□□ 0.44
NOVA1-207ENST00000546546 PARP4Q9UKK3 1724 aaKnown RBP17.77■□□□□ 0.44
NOVA1-207ENST00000546546 LRRC37A3O60309 1634 aa17.76■□□□□ 0.43
NOVA1-207ENST00000546546 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
NOVA1-207ENST00000546546 ZCRB1Q8TBF4 217 aaKnown RBP17.76■□□□□ 0.43
NOVA1-207ENST00000546546 TNS2Q63HR2 1409 aa17.75■□□□□ 0.43
NOVA1-207ENST00000546546 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
NOVA1-207ENST00000546546 EIF4A2Q14240 407 aaKnown RBP17.75■□□□□ 0.43
NOVA1-207ENST00000546546 EYA1Q99502 592 aa17.75■□□□□ 0.43
NOVA1-207ENST00000546546 KCNQ2O43526 872 aa17.74■□□□□ 0.43
NOVA1-207ENST00000546546 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
NOVA1-207ENST00000546546 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
NOVA1-207ENST00000546546 MEGF6O75095 1541 aa17.72■□□□□ 0.43
NOVA1-207ENST00000546546 MTHFSP49914 203 aa17.71■□□□□ 0.43
NOVA1-207ENST00000546546 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
NOVA1-207ENST00000546546 PSDA5PKW4 1024 aaPredicted RBP17.69■□□□□ 0.42
NOVA1-207ENST00000546546 WNK3Q9BYP7 1800 aa17.68■□□□□ 0.42
NOVA1-207ENST00000546546 RGPD1P0DJD0 1748 aa17.68■□□□□ 0.42
NOVA1-207ENST00000546546 BCL9O00512 1426 aa17.67■□□□□ 0.42
NOVA1-207ENST00000546546 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms