RNA–Protein interactions for RNA: ENST00000546480.1

VENTXP3-201, Transcript of VENT homeobox pseudogene 3, humanhuman

BASIC

Gene VENTXP3, Length 773 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTXP3-201ENST00000546480 C11orf95C9JLR9 678 aaPredicted RBP19■□□□□ 0.63
VENTXP3-201ENST00000546480 LARP1Q6PKG0 1096 aaKnown RBP19■□□□□ 0.63
VENTXP3-201ENST00000546480 ARHGEF25Q86VW2 580 aa19■□□□□ 0.63
VENTXP3-201ENST00000546480 SEPT12Q8IYM1 358 aa19■□□□□ 0.63
VENTXP3-201ENST00000546480 COL18A1P39060 1754 aa18.98■□□□□ 0.63
VENTXP3-201ENST00000546480 FYB1O15117 783 aa18.98■□□□□ 0.63
VENTXP3-201ENST00000546480 TOM1L2Q6ZVM7 507 aa18.98■□□□□ 0.63
VENTXP3-201ENST00000546480 CARD14Q9BXL6 1004 aa18.98■□□□□ 0.63
VENTXP3-201ENST00000546480 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
VENTXP3-201ENST00000546480 SPATA31A1Q5TZJ5 1347 aa18.98■□□□□ 0.63
VENTXP3-201ENST00000546480 BRWD3Q6RI45 1802 aa18.97■□□□□ 0.63
VENTXP3-201ENST00000546480 PANK3Q9H999 370 aa18.97■□□□□ 0.63
VENTXP3-201ENST00000546480 AXIN2Q9Y2T1 843 aa18.97■□□□□ 0.63
VENTXP3-201ENST00000546480 CGNL1Q0VF96 1302 aa18.96■□□□□ 0.63
VENTXP3-201ENST00000546480 CRB1P82279 1406 aa18.95■□□□□ 0.62
VENTXP3-201ENST00000546480 AMPHP49418 695 aa18.95■□□□□ 0.62
VENTXP3-201ENST00000546480 FBLN1P23142 703 aa18.94■□□□□ 0.62
VENTXP3-201ENST00000546480 ABCC6O95255 1503 aa18.94■□□□□ 0.62
VENTXP3-201ENST00000546480 TCP11L2Q8N4U5 519 aa18.93■□□□□ 0.62
VENTXP3-201ENST00000546480 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
VENTXP3-201ENST00000546480 RRS1Q15050 365 aaKnown RBP18.92■□□□□ 0.62
VENTXP3-201ENST00000546480 KRT27Q7Z3Y8 459 aa18.92■□□□□ 0.62
VENTXP3-201ENST00000546480 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
VENTXP3-201ENST00000546480 THSD7AQ9UPZ6 1657 aa18.92■□□□□ 0.62
VENTXP3-201ENST00000546480 MAP3K19Q56UN5 1328 aa18.91■□□□□ 0.62
VENTXP3-201ENST00000546480 ANKRD26Q9UPS8 1709 aa18.91■□□□□ 0.62
VENTXP3-201ENST00000546480 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
VENTXP3-201ENST00000546480 ANKRD24Q8TF21 1146 aa18.9■□□□□ 0.62
VENTXP3-201ENST00000546480 UPF1Q92900 1129 aaKnown RBP eCLIP18.9■□□□□ 0.62
VENTXP3-201ENST00000546480 THRAP3Q9Y2W1 955 aaKnown RBP18.9■□□□□ 0.62
VENTXP3-201ENST00000546480 KNSTRNQ9Y448 316 aa18.9■□□□□ 0.62
VENTXP3-201ENST00000546480 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
VENTXP3-201ENST00000546480 NLRP2Q9NX02 1062 aa18.89■□□□□ 0.61
VENTXP3-201ENST00000546480 CCDC7Q96M83 1385 aa18.89■□□□□ 0.61
VENTXP3-201ENST00000546480 BLMP54132 1417 aaPredicted RBP18.89■□□□□ 0.61
VENTXP3-201ENST00000546480 WNK3Q9BYP7 1800 aa18.88■□□□□ 0.61
VENTXP3-201ENST00000546480 PPM1GO15355 546 aaPredicted RBP18.88■□□□□ 0.61
VENTXP3-201ENST00000546480 HOXC9P31274 260 aa18.88■□□□□ 0.61
VENTXP3-201ENST00000546480 BARGINQ6ZT62 677 aa18.88■□□□□ 0.61
VENTXP3-201ENST00000546480 IP6K1Q92551 441 aa18.88■□□□□ 0.61
VENTXP3-201ENST00000546480 ERBB3P21860 1342 aa18.88■□□□□ 0.61
VENTXP3-201ENST00000546480 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
VENTXP3-201ENST00000546480 CNGB1Q14028 1251 aaPredicted RBP18.87■□□□□ 0.61
VENTXP3-201ENST00000546480 FAM182BQ5T319 152 aa18.87■□□□□ 0.61
VENTXP3-201ENST00000546480 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
VENTXP3-201ENST00000546480 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
VENTXP3-201ENST00000546480 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
VENTXP3-201ENST00000546480 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
VENTXP3-201ENST00000546480 SMG6Q86US8 1419 aaKnown RBP18.85■□□□□ 0.61
VENTXP3-201ENST00000546480 CARD10Q9BWT7 1032 aa18.85■□□□□ 0.61
VENTXP3-201ENST00000546480 EMILIN1Q9Y6C2 1016 aa18.84■□□□□ 0.61
VENTXP3-201ENST00000546480 NSD2O96028 1365 aa18.83■□□□□ 0.61
VENTXP3-201ENST00000546480 LRRC37A3O60309 1634 aa18.83■□□□□ 0.61
VENTXP3-201ENST00000546480 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
VENTXP3-201ENST00000546480 DDB1Q16531 1140 aa18.83■□□□□ 0.6
VENTXP3-201ENST00000546480 MORC1Q86VD1 984 aa18.83■□□□□ 0.6
VENTXP3-201ENST00000546480 MAP2P11137 1827 aaKnown RBP18.83■□□□□ 0.6
VENTXP3-201ENST00000546480 PEAK1Q9H792 1746 aa18.83■□□□□ 0.6
VENTXP3-201ENST00000546480 FLT4P35916 1363 aa18.82■□□□□ 0.6
VENTXP3-201ENST00000546480 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
VENTXP3-201ENST00000546480 ZEB1P37275 1124 aaPredicted RBP18.8■□□□□ 0.6
VENTXP3-201ENST00000546480 HSP90AB2PQ58FF8 381 aa18.8■□□□□ 0.6
VENTXP3-201ENST00000546480 CDCA7Q9BWT1 371 aaPredicted RBP18.8■□□□□ 0.6
VENTXP3-201ENST00000546480 EP400Q96L91 3159 aa18.79■□□□□ 0.6
VENTXP3-201ENST00000546480 CC2D1BQ5T0F9 858 aaKnown RBP18.79■□□□□ 0.6
VENTXP3-201ENST00000546480 IL2RBP14784 551 aa18.78■□□□□ 0.6
VENTXP3-201ENST00000546480 KIF24Q5T7B8 1368 aa18.78■□□□□ 0.6
VENTXP3-201ENST00000546480 EXOC5O00471 708 aa18.77■□□□□ 0.6
VENTXP3-201ENST00000546480 CCDC125Q86Z20 511 aa18.77■□□□□ 0.6
VENTXP3-201ENST00000546480 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
VENTXP3-201ENST00000546480 INSRP06213 1382 aa18.77■□□□□ 0.6
VENTXP3-201ENST00000546480 RGPD1P0DJD0 1748 aa18.77■□□□□ 0.59
VENTXP3-201ENST00000546480 FAM196AQ6ZSG2 479 aa18.76■□□□□ 0.59
VENTXP3-201ENST00000546480 POLKQ9UBT6 870 aa18.76■□□□□ 0.59
VENTXP3-201ENST00000546480 DISP2A7MBM2 1401 aa18.75■□□□□ 0.59
VENTXP3-201ENST00000546480 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
VENTXP3-201ENST00000546480 OVOS2A0A0G2JMS6 1433 aa18.74■□□□□ 0.59
VENTXP3-201ENST00000546480 TNS2Q63HR2 1409 aa18.74■□□□□ 0.59
VENTXP3-201ENST00000546480 TRIM37O94972 964 aa18.73■□□□□ 0.59
VENTXP3-201ENST00000546480 NBPF6Q5VWK0 638 aa18.73■□□□□ 0.59
VENTXP3-201ENST00000546480 NBPF4Q96M43 638 aa18.73■□□□□ 0.59
VENTXP3-201ENST00000546480 PER1O15534 1290 aaPredicted RBP18.72■□□□□ 0.59
VENTXP3-201ENST00000546480 BAG6P46379 1132 aa18.71■□□□□ 0.59
VENTXP3-201ENST00000546480 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
VENTXP3-201ENST00000546480 RAPGEF4Q8WZA2 1011 aa18.71■□□□□ 0.59
VENTXP3-201ENST00000546480 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
VENTXP3-201ENST00000546480 MARCH10Q8NA82 808 aaPredicted RBP18.7■□□□□ 0.58
VENTXP3-201ENST00000546480 TATP17735 454 aaPredicted RBP18.69■□□□□ 0.58
VENTXP3-201ENST00000546480 DDX54Q8TDD1 881 aaKnown RBP18.69■□□□□ 0.58
VENTXP3-201ENST00000546480 MEGF6O75095 1541 aa18.69■□□□□ 0.58
VENTXP3-201ENST00000546480 APBA3O96018 575 aa18.67■□□□□ 0.58
VENTXP3-201ENST00000546480 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
VENTXP3-201ENST00000546480 EN1Q05925 392 aaPredicted RBP18.66■□□□□ 0.58
VENTXP3-201ENST00000546480 ACSBG1Q96GR2 724 aa18.66■□□□□ 0.58
VENTXP3-201ENST00000546480 SBF2Q86WG5 1849 aa18.65■□□□□ 0.58
VENTXP3-201ENST00000546480 ZCRB1Q8TBF4 217 aaKnown RBP18.65■□□□□ 0.58
VENTXP3-201ENST00000546480 EYA1Q99502 592 aa18.65■□□□□ 0.58
VENTXP3-201ENST00000546480 MTHFSP49914 203 aa18.64■□□□□ 0.57
VENTXP3-201ENST00000546480 NPC1L1Q9UHC9 1359 aa18.64■□□□□ 0.57
VENTXP3-201ENST00000546480 SHANK3Q9BYB0 1731 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms