RNA–Protein interactions for RNA: ENST00000546425.1

HVCN1-204, Transcript of hydrogen voltage gated channel 1, humanhuman

TSL 3

Gene HVCN1, Length 788 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-204ENST00000546425 UPF1Q92900 1129 aaKnown RBP eCLIP18.05■□□□□ 0.48
HVCN1-204ENST00000546425 STRN4Q9NRL3 753 aa18.05■□□□□ 0.48
HVCN1-204ENST00000546425 OVOS2A0A0J9YW53 1432 aa18.05■□□□□ 0.48
HVCN1-204ENST00000546425 OVOS2Q6IE36 1432 aa18.05■□□□□ 0.48
HVCN1-204ENST00000546425 SEPT12Q8IYM1 358 aa18.04■□□□□ 0.48
HVCN1-204ENST00000546425 ZBTB7CA1YPR0 619 aa18.03■□□□□ 0.48
HVCN1-204ENST00000546425 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
HVCN1-204ENST00000546425 EVA1CP58658 441 aa18.03■□□□□ 0.48
HVCN1-204ENST00000546425 SPATA31A1Q5TZJ5 1347 aa18.02■□□□□ 0.48
HVCN1-204ENST00000546425 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
HVCN1-204ENST00000546425 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
HVCN1-204ENST00000546425 PARP4Q9UKK3 1724 aaKnown RBP18.02■□□□□ 0.48
HVCN1-204ENST00000546425 SOX12O15370 315 aa18.01■□□□□ 0.47
HVCN1-204ENST00000546425 FAM98CQ17RN3 349 aaKnown RBP18.01■□□□□ 0.47
HVCN1-204ENST00000546425 CRB1P82279 1406 aa18■□□□□ 0.47
HVCN1-204ENST00000546425 A0A0G2JS52 829 aa18■□□□□ 0.47
HVCN1-204ENST00000546425 MYT1Q01538 1121 aa18■□□□□ 0.47
HVCN1-204ENST00000546425 ANKRD26Q9UPS8 1709 aa17.99■□□□□ 0.47
HVCN1-204ENST00000546425 LARP1Q6PKG0 1096 aaKnown RBP17.99■□□□□ 0.47
HVCN1-204ENST00000546425 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
HVCN1-204ENST00000546425 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
HVCN1-204ENST00000546425 KRT27Q7Z3Y8 459 aa17.97■□□□□ 0.47
HVCN1-204ENST00000546425 COG3Q96JB2 828 aa17.97■□□□□ 0.47
HVCN1-204ENST00000546425 RGPD1P0DJD0 1748 aa17.97■□□□□ 0.47
HVCN1-204ENST00000546425 USP35Q9P2H5 1018 aa17.96■□□□□ 0.47
HVCN1-204ENST00000546425 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
HVCN1-204ENST00000546425 THRAP3Q9Y2W1 955 aaKnown RBP17.96■□□□□ 0.47
HVCN1-204ENST00000546425 WDR17Q8IZU2 1322 aa17.96■□□□□ 0.46
HVCN1-204ENST00000546425 LRRC37A3O60309 1634 aa17.95■□□□□ 0.46
HVCN1-204ENST00000546425 TCP11L2Q8N4U5 519 aa17.95■□□□□ 0.46
HVCN1-204ENST00000546425 NSD3Q9BZ95 1437 aa17.95■□□□□ 0.46
HVCN1-204ENST00000546425 BLMP54132 1417 aaPredicted RBP17.93■□□□□ 0.46
HVCN1-204ENST00000546425 FYB1O15117 783 aa17.93■□□□□ 0.46
HVCN1-204ENST00000546425 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
HVCN1-204ENST00000546425 TOM1L2Q6ZVM7 507 aa17.93■□□□□ 0.46
HVCN1-204ENST00000546425 CCDC125Q86Z20 511 aa17.93■□□□□ 0.46
HVCN1-204ENST00000546425 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
HVCN1-204ENST00000546425 TNS1Q9HBL0 1735 aaKnown RBP17.92■□□□□ 0.46
HVCN1-204ENST00000546425 MAP2P11137 1827 aaKnown RBP17.91■□□□□ 0.46
HVCN1-204ENST00000546425 GGNBP2Q9H3C7 697 aa17.91■□□□□ 0.46
HVCN1-204ENST00000546425 RGPD2P0DJD1 1756 aa17.91■□□□□ 0.46
HVCN1-204ENST00000546425 CSB-PGBD3P0DP91 1061 aa17.9■□□□□ 0.46
HVCN1-204ENST00000546425 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
HVCN1-204ENST00000546425 ERBB3P21860 1342 aa17.9■□□□□ 0.46
HVCN1-204ENST00000546425 CCDC7Q96M83 1385 aa17.9■□□□□ 0.46
HVCN1-204ENST00000546425 RTL1A6NKG5 1358 aa17.89■□□□□ 0.45
HVCN1-204ENST00000546425 SBF2Q86WG5 1849 aa17.88■□□□□ 0.45
HVCN1-204ENST00000546425 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
HVCN1-204ENST00000546425 PEAK1Q9H792 1746 aa17.88■□□□□ 0.45
HVCN1-204ENST00000546425 C11orf95C9JLR9 678 aaPredicted RBP17.87■□□□□ 0.45
HVCN1-204ENST00000546425 IP6K1Q92551 441 aa17.87■□□□□ 0.45
HVCN1-204ENST00000546425 CGNL1Q0VF96 1302 aa17.87■□□□□ 0.45
HVCN1-204ENST00000546425 MAP3K19Q56UN5 1328 aa17.87■□□□□ 0.45
HVCN1-204ENST00000546425 PDE3BQ13370 1112 aa17.86■□□□□ 0.45
HVCN1-204ENST00000546425 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
HVCN1-204ENST00000546425 DISP2A7MBM2 1401 aa17.86■□□□□ 0.45
HVCN1-204ENST00000546425 AMPHP49418 695 aa17.85■□□□□ 0.45
HVCN1-204ENST00000546425 SF3B2Q13435 895 aaKnown RBP17.85■□□□□ 0.45
HVCN1-204ENST00000546425 ANKRD24Q8TF21 1146 aa17.85■□□□□ 0.45
HVCN1-204ENST00000546425 KIF24Q5T7B8 1368 aa17.84■□□□□ 0.45
HVCN1-204ENST00000546425 HOXC9P31274 260 aa17.84■□□□□ 0.45
HVCN1-204ENST00000546425 FAM182BQ5T319 152 aa17.84■□□□□ 0.45
HVCN1-204ENST00000546425 EP400Q96L91 3159 aa17.84■□□□□ 0.45
HVCN1-204ENST00000546425 KIF7Q2M1P5 1343 aa17.83■□□□□ 0.44
HVCN1-204ENST00000546425 FBLN1P23142 703 aa17.83■□□□□ 0.44
HVCN1-204ENST00000546425 FAM196AQ6ZSG2 479 aa17.83■□□□□ 0.44
HVCN1-204ENST00000546425 PANK3Q9H999 370 aa17.83■□□□□ 0.44
HVCN1-204ENST00000546425 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.44
HVCN1-204ENST00000546425 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
HVCN1-204ENST00000546425 DDB1Q16531 1140 aa17.82■□□□□ 0.44
HVCN1-204ENST00000546425 OVOS2A0A0G2JMS6 1433 aa17.81■□□□□ 0.44
HVCN1-204ENST00000546425 NSD2O96028 1365 aa17.81■□□□□ 0.44
HVCN1-204ENST00000546425 FLT4P35916 1363 aa17.81■□□□□ 0.44
HVCN1-204ENST00000546425 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
HVCN1-204ENST00000546425 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
HVCN1-204ENST00000546425 KCNA4P22459 653 aa17.8■□□□□ 0.44
HVCN1-204ENST00000546425 RGPD3A6NKT7 1758 aaPredicted RBP17.79■□□□□ 0.44
HVCN1-204ENST00000546425 RGPD4Q7Z3J3 1758 aa17.79■□□□□ 0.44
HVCN1-204ENST00000546425 INSRP06213 1382 aa17.79■□□□□ 0.44
HVCN1-204ENST00000546425 SHANK3Q9BYB0 1731 aa17.78■□□□□ 0.44
HVCN1-204ENST00000546425 IL2RBP14784 551 aa17.78■□□□□ 0.44
HVCN1-204ENST00000546425 BAG6P46379 1132 aa17.78■□□□□ 0.44
HVCN1-204ENST00000546425 LTV1Q96GA3 475 aaPredicted RBP17.78■□□□□ 0.44
HVCN1-204ENST00000546425 RREB1Q92766 1687 aa17.77■□□□□ 0.44
HVCN1-204ENST00000546425 BCL9O00512 1426 aa17.76■□□□□ 0.43
HVCN1-204ENST00000546425 EXOC5O00471 708 aa17.76■□□□□ 0.43
HVCN1-204ENST00000546425 DEFB132Q7Z7B7 95 aa17.76■□□□□ 0.43
HVCN1-204ENST00000546425 KNSTRNQ9Y448 316 aa17.76■□□□□ 0.43
HVCN1-204ENST00000546425 NHSQ6T4R5 1651 aa17.76■□□□□ 0.43
HVCN1-204ENST00000546425 TRIM37O94972 964 aa17.75■□□□□ 0.43
HVCN1-204ENST00000546425 EMILIN1Q9Y6C2 1016 aa17.75■□□□□ 0.43
HVCN1-204ENST00000546425 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
HVCN1-204ENST00000546425 MARCH10Q8NA82 808 aaPredicted RBP17.73■□□□□ 0.43
HVCN1-204ENST00000546425 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
HVCN1-204ENST00000546425 NUP188Q5SRE5 1749 aa17.72■□□□□ 0.43
HVCN1-204ENST00000546425 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
HVCN1-204ENST00000546425 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
HVCN1-204ENST00000546425 POLKQ9UBT6 870 aa17.71■□□□□ 0.43
HVCN1-204ENST00000546425 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
HVCN1-204ENST00000546425 MEGF6O75095 1541 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms