RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 WNK3Q9BYP7 1800 aa10.67□□□□□ -0.7
KDM1B-203ENST00000546309 MON2Q7Z3U7 1717 aa10.67□□□□□ -0.7
KDM1B-203ENST00000546309 LRRC37A3O60309 1634 aa10.66□□□□□ -0.7
KDM1B-203ENST00000546309 BARGINQ6ZT62 677 aa10.66□□□□□ -0.7
KDM1B-203ENST00000546309 CDCA8Q53HL2 280 aa10.65□□□□□ -0.7
KDM1B-203ENST00000546309 USP35Q9P2H5 1018 aa10.65□□□□□ -0.7
KDM1B-203ENST00000546309 USP54Q70EL1 1684 aa10.65□□□□□ -0.7
KDM1B-203ENST00000546309 CCER2I3L3R5 266 aa10.64□□□□□ -0.71
KDM1B-203ENST00000546309 TRIM37O94972 964 aa10.64□□□□□ -0.71
KDM1B-203ENST00000546309 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
KDM1B-203ENST00000546309 TMF1P82094 1093 aa10.64□□□□□ -0.71
KDM1B-203ENST00000546309 ARHGEF25Q86VW2 580 aa10.64□□□□□ -0.71
KDM1B-203ENST00000546309 PROM2Q8N271 834 aa10.64□□□□□ -0.71
KDM1B-203ENST00000546309 PUS7Q96PZ0 661 aaKnown RBP10.64□□□□□ -0.71
KDM1B-203ENST00000546309 TTC21BQ7Z4L5 1316 aa10.63□□□□□ -0.71
KDM1B-203ENST00000546309 PDGFDQ9GZP0 370 aaPredicted RBP10.63□□□□□ -0.71
KDM1B-203ENST00000546309 AATKQ6ZMQ8 1374 aa10.63□□□□□ -0.71
KDM1B-203ENST00000546309 ANP32CO43423 234 aa10.62□□□□□ -0.71
KDM1B-203ENST00000546309 FBLN1P23142 703 aa10.61□□□□□ -0.71
KDM1B-203ENST00000546309 NLRP6P59044 892 aa10.61□□□□□ -0.71
KDM1B-203ENST00000546309 R3HDM1Q15032 1099 aaKnown RBP10.61□□□□□ -0.71
KDM1B-203ENST00000546309 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
KDM1B-203ENST00000546309 CRB1P82279 1406 aa10.6□□□□□ -0.71
KDM1B-203ENST00000546309 NLRP13Q86W25 1043 aa10.6□□□□□ -0.71
KDM1B-203ENST00000546309 NME9Q86XW9 330 aa10.6□□□□□ -0.71
KDM1B-203ENST00000546309 TCP11L2Q8N4U5 519 aa10.6□□□□□ -0.71
KDM1B-203ENST00000546309 SLC12A5Q9H2X9 1139 aa10.6□□□□□ -0.71
KDM1B-203ENST00000546309 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
KDM1B-203ENST00000546309 USP31Q70CQ4 1352 aa10.59□□□□□ -0.71
KDM1B-203ENST00000546309 KTN1Q86UP2 1357 aaKnown RBP10.59□□□□□ -0.71
KDM1B-203ENST00000546309 RGPD2P0DJD1 1756 aa10.59□□□□□ -0.71
KDM1B-203ENST00000546309 LTN1O94822 1766 aa10.58□□□□□ -0.72
KDM1B-203ENST00000546309 CASZ1Q86V15 1759 aa10.58□□□□□ -0.72
KDM1B-203ENST00000546309 BRD4O60885 1362 aaPredicted RBP10.58□□□□□ -0.72
KDM1B-203ENST00000546309 EVC2Q86UK5 1308 aa10.58□□□□□ -0.72
KDM1B-203ENST00000546309 PER1O15534 1290 aaPredicted RBP10.57□□□□□ -0.72
KDM1B-203ENST00000546309 FAM196AQ6ZSG2 479 aa10.57□□□□□ -0.72
KDM1B-203ENST00000546309 OVOS2A0A0J9YW53 1432 aa10.57□□□□□ -0.72
KDM1B-203ENST00000546309 OVOS2Q6IE36 1432 aa10.57□□□□□ -0.72
KDM1B-203ENST00000546309 WDR17Q8IZU2 1322 aa10.57□□□□□ -0.72
KDM1B-203ENST00000546309 APBA3O96018 575 aa10.56□□□□□ -0.72
KDM1B-203ENST00000546309 EVA1CP58658 441 aa10.56□□□□□ -0.72
KDM1B-203ENST00000546309 PRKRIP1Q9H875 184 aaPredicted RBP10.56□□□□□ -0.72
KDM1B-203ENST00000546309 SHANK3Q9BYB0 1731 aa10.55□□□□□ -0.72
KDM1B-203ENST00000546309 A0A1W2PP64 1363 aa10.55□□□□□ -0.72
KDM1B-203ENST00000546309 FAM208AQ9UK61 1670 aaKnown RBP10.55□□□□□ -0.72
KDM1B-203ENST00000546309 DCAF8L1A6NGE4 600 aa10.55□□□□□ -0.72
KDM1B-203ENST00000546309 SOX12O15370 315 aa10.55□□□□□ -0.72
KDM1B-203ENST00000546309 KCNQ2O43526 872 aa10.55□□□□□ -0.72
KDM1B-203ENST00000546309 BCL9O00512 1426 aa10.55□□□□□ -0.72
KDM1B-203ENST00000546309 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
KDM1B-203ENST00000546309 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
KDM1B-203ENST00000546309 ZBTB7CA1YPR0 619 aa10.54□□□□□ -0.72
KDM1B-203ENST00000546309 PDE3BQ13370 1112 aa10.54□□□□□ -0.72
KDM1B-203ENST00000546309 NBPF14Q5TI25 921 aa10.54□□□□□ -0.72
KDM1B-203ENST00000546309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.54□□□□□ -0.72
KDM1B-203ENST00000546309 PPP1R1BQ9UD71 204 aaPredicted RBP10.54□□□□□ -0.72
KDM1B-203ENST00000546309 THRAP3Q9Y2W1 955 aaKnown RBP10.54□□□□□ -0.72
KDM1B-203ENST00000546309 NPC1L1Q9UHC9 1359 aa10.53□□□□□ -0.72
KDM1B-203ENST00000546309 RALBP1Q15311 655 aa10.53□□□□□ -0.72
KDM1B-203ENST00000546309 CARD10Q9BWT7 1032 aa10.53□□□□□ -0.72
KDM1B-203ENST00000546309 PAPPAQ13219 1627 aa10.53□□□□□ -0.72
KDM1B-203ENST00000546309 TTC21AQ8NDW8 1320 aa10.53□□□□□ -0.72
KDM1B-203ENST00000546309 ZNF692Q9BU19 519 aaPredicted RBP10.52□□□□□ -0.73
KDM1B-203ENST00000546309 PARD3Q8TEW0 1356 aa10.52□□□□□ -0.73
KDM1B-203ENST00000546309 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
KDM1B-203ENST00000546309 OVOS2A0A0G2JMS6 1433 aa10.51□□□□□ -0.73
KDM1B-203ENST00000546309 TOM1L2Q6ZVM7 507 aa10.51□□□□□ -0.73
KDM1B-203ENST00000546309 ABCC6O95255 1503 aa10.51□□□□□ -0.73
KDM1B-203ENST00000546309 ERBB3P21860 1342 aa10.51□□□□□ -0.73
KDM1B-203ENST00000546309 BTAF1O14981 1849 aa10.51□□□□□ -0.73
KDM1B-203ENST00000546309 MYOM1P52179 1685 aa10.5□□□□□ -0.73
KDM1B-203ENST00000546309 NHSQ6T4R5 1651 aa10.5□□□□□ -0.73
KDM1B-203ENST00000546309 PLSCR1O15162 318 aa10.5□□□□□ -0.73
KDM1B-203ENST00000546309 YY1P25490 414 aa10.5□□□□□ -0.73
KDM1B-203ENST00000546309 CARD14Q9BXL6 1004 aa10.5□□□□□ -0.73
KDM1B-203ENST00000546309 PANK3Q9H999 370 aa10.5□□□□□ -0.73
KDM1B-203ENST00000546309 PTGER2P43116 358 aa10.49□□□□□ -0.73
KDM1B-203ENST00000546309 DDB1Q16531 1140 aa10.49□□□□□ -0.73
KDM1B-203ENST00000546309 SGIP1Q9BQI5 828 aa10.49□□□□□ -0.73
KDM1B-203ENST00000546309 POLR3GLQ9BT43 218 aa10.49□□□□□ -0.73
KDM1B-203ENST00000546309 BCL11BQ9C0K0 894 aaPredicted RBP10.49□□□□□ -0.73
KDM1B-203ENST00000546309 LRRC4BQ9NT99 713 aa10.49□□□□□ -0.73
KDM1B-203ENST00000546309 TUBGCP6Q96RT7 1819 aa10.49□□□□□ -0.73
KDM1B-203ENST00000546309 TNS2Q63HR2 1409 aa10.49□□□□□ -0.73
KDM1B-203ENST00000546309 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
KDM1B-203ENST00000546309 MAP3K19Q56UN5 1328 aa10.48□□□□□ -0.73
KDM1B-203ENST00000546309 NSD2O96028 1365 aa10.48□□□□□ -0.73
KDM1B-203ENST00000546309 KAT6BQ8WYB5 2073 aa10.47□□□□□ -0.73
KDM1B-203ENST00000546309 KCNH5Q8NCM2 988 aa10.47□□□□□ -0.73
KDM1B-203ENST00000546309 SPON1Q9HCB6 807 aa10.47□□□□□ -0.73
KDM1B-203ENST00000546309 MEGF6O75095 1541 aa10.47□□□□□ -0.73
KDM1B-203ENST00000546309 COL24A1Q17RW2 1714 aa10.47□□□□□ -0.73
KDM1B-203ENST00000546309 FYB1O15117 783 aa10.46□□□□□ -0.73
KDM1B-203ENST00000546309 TXNRD1Q16881 649 aa10.46□□□□□ -0.73
KDM1B-203ENST00000546309 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.73
KDM1B-203ENST00000546309 ANKRD24Q8TF21 1146 aa10.46□□□□□ -0.73
KDM1B-203ENST00000546309 ACSBG1Q96GR2 724 aa10.46□□□□□ -0.73
KDM1B-203ENST00000546309 KNSTRNQ9Y448 316 aa10.46□□□□□ -0.73
KDM1B-203ENST00000546309 MYBBP1AQ9BQG0 1328 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms