RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RRS1Q15050 365 aaKnown RBP22.99■■□□□ 1.27
LTBR-215ENST00000546296 MORC1Q86VD1 984 aa22.99■■□□□ 1.27
LTBR-215ENST00000546296 MAP3K19Q56UN5 1328 aa22.99■■□□□ 1.27
LTBR-215ENST00000546296 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
LTBR-215ENST00000546296 USP35Q9P2H5 1018 aa22.98■■□□□ 1.27
LTBR-215ENST00000546296 SPATA31A5Q5VU36 1347 aa22.98■■□□□ 1.27
LTBR-215ENST00000546296 SPATA31A7Q8IWB4 1347 aa22.98■■□□□ 1.27
LTBR-215ENST00000546296 NSD2O96028 1365 aa22.98■■□□□ 1.27
LTBR-215ENST00000546296 PER1O15534 1290 aaPredicted RBP22.97■■□□□ 1.27
LTBR-215ENST00000546296 IP6K1Q92551 441 aa22.97■■□□□ 1.27
LTBR-215ENST00000546296 CNGB1Q14028 1251 aaPredicted RBP22.96■■□□□ 1.27
LTBR-215ENST00000546296 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
LTBR-215ENST00000546296 TOM1L2Q6ZVM7 507 aa22.96■■□□□ 1.27
LTBR-215ENST00000546296 COL5A2P05997 1499 aaPredicted RBP22.96■■□□□ 1.27
LTBR-215ENST00000546296 LMO7Q8WWI1 1683 aa22.96■■□□□ 1.27
LTBR-215ENST00000546296 NRAPQ86VF7 1730 aa22.96■■□□□ 1.27
LTBR-215ENST00000546296 A0A0G2JS52 829 aa22.95■■□□□ 1.26
LTBR-215ENST00000546296 MYT1Q01538 1121 aa22.95■■□□□ 1.26
LTBR-215ENST00000546296 SPATA31A1Q5TZJ5 1347 aa22.95■■□□□ 1.26
LTBR-215ENST00000546296 PPM1GO15355 546 aaPredicted RBP22.94■■□□□ 1.26
LTBR-215ENST00000546296 HOXC9P31274 260 aa22.94■■□□□ 1.26
LTBR-215ENST00000546296 FAM98CQ17RN3 349 aaKnown RBP22.94■■□□□ 1.26
LTBR-215ENST00000546296 CC2D1BQ5T0F9 858 aaKnown RBP22.94■■□□□ 1.26
LTBR-215ENST00000546296 LTV1Q96GA3 475 aaPredicted RBP22.94■■□□□ 1.26
LTBR-215ENST00000546296 WDR17Q8IZU2 1322 aa22.93■■□□□ 1.26
LTBR-215ENST00000546296 ANKRD24Q8TF21 1146 aa22.93■■□□□ 1.26
LTBR-215ENST00000546296 CDK12Q9NYV4 1490 aaPredicted RBP22.92■■□□□ 1.26
LTBR-215ENST00000546296 COL18A1P39060 1754 aa22.92■■□□□ 1.26
LTBR-215ENST00000546296 SEPT12Q8IYM1 358 aa22.91■■□□□ 1.26
LTBR-215ENST00000546296 TCP11L2Q8N4U5 519 aa22.91■■□□□ 1.26
LTBR-215ENST00000546296 NLRP2Q9NX02 1062 aa22.91■■□□□ 1.26
LTBR-215ENST00000546296 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
LTBR-215ENST00000546296 GLI3P10071 1580 aa22.91■■□□□ 1.26
LTBR-215ENST00000546296 ABCC6O95255 1503 aa22.91■■□□□ 1.26
LTBR-215ENST00000546296 CRB1P82279 1406 aa22.91■■□□□ 1.26
LTBR-215ENST00000546296 ONECUT3O60422 494 aaPredicted RBP22.9■■□□□ 1.26
LTBR-215ENST00000546296 RGS12O14924 1447 aa22.9■■□□□ 1.26
LTBR-215ENST00000546296 BLMP54132 1417 aaPredicted RBP22.9■■□□□ 1.26
LTBR-215ENST00000546296 RTL1A6NKG5 1358 aa22.89■■□□□ 1.26
LTBR-215ENST00000546296 LTN1O94822 1766 aa22.89■■□□□ 1.26
LTBR-215ENST00000546296 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.25
LTBR-215ENST00000546296 POLKQ9UBT6 870 aa22.89■■□□□ 1.25
LTBR-215ENST00000546296 THRAP3Q9Y2W1 955 aaKnown RBP22.89■■□□□ 1.25
LTBR-215ENST00000546296 ERBB3P21860 1342 aa22.88■■□□□ 1.25
LTBR-215ENST00000546296 CARD10Q9BWT7 1032 aa22.88■■□□□ 1.25
LTBR-215ENST00000546296 HSP90AB2PQ58FF8 381 aa22.87■■□□□ 1.25
LTBR-215ENST00000546296 FLT4P35916 1363 aa22.87■■□□□ 1.25
LTBR-215ENST00000546296 KIF24Q5T7B8 1368 aa22.87■■□□□ 1.25
LTBR-215ENST00000546296 BARGINQ6ZT62 677 aa22.86■■□□□ 1.25
LTBR-215ENST00000546296 ZNF316A6NFI3 1004 aaPredicted RBP22.85■■□□□ 1.25
LTBR-215ENST00000546296 NPC1L1Q9UHC9 1359 aa22.85■■□□□ 1.25
LTBR-215ENST00000546296 ANKRD26Q9UPS8 1709 aa22.85■■□□□ 1.25
LTBR-215ENST00000546296 RGPD5Q99666 1765 aa22.84■■□□□ 1.25
LTBR-215ENST00000546296 INSRP06213 1382 aa22.84■■□□□ 1.25
LTBR-215ENST00000546296 SMG6Q86US8 1419 aaKnown RBP22.82■■□□□ 1.24
LTBR-215ENST00000546296 SOCS7O14512 581 aa22.81■■□□□ 1.24
LTBR-215ENST00000546296 KRT27Q7Z3Y8 459 aa22.81■■□□□ 1.24
LTBR-215ENST00000546296 CDCA7Q9BWT1 371 aaPredicted RBP22.8■■□□□ 1.24
LTBR-215ENST00000546296 PDE3BQ13370 1112 aa22.79■■□□□ 1.24
LTBR-215ENST00000546296 PEAK1Q9H792 1746 aa22.78■■□□□ 1.24
LTBR-215ENST00000546296 MTHFSP49914 203 aa22.77■■□□□ 1.24
LTBR-215ENST00000546296 NBPF6Q5VWK0 638 aa22.77■■□□□ 1.24
LTBR-215ENST00000546296 NBPF4Q96M43 638 aa22.77■■□□□ 1.24
LTBR-215ENST00000546296 MAP2P11137 1827 aaKnown RBP22.76■■□□□ 1.23
LTBR-215ENST00000546296 DDB1Q16531 1140 aa22.76■■□□□ 1.23
LTBR-215ENST00000546296 IL2RBP14784 551 aa22.75■■□□□ 1.23
LTBR-215ENST00000546296 USHBP1Q8N6Y0 703 aa22.75■■□□□ 1.23
LTBR-215ENST00000546296 EXOC5O00471 708 aa22.74■■□□□ 1.23
LTBR-215ENST00000546296 EIF4A2Q14240 407 aaKnown RBP22.74■■□□□ 1.23
LTBR-215ENST00000546296 THSD7AQ9UPZ6 1657 aa22.72■■□□□ 1.23
LTBR-215ENST00000546296 FAM182BQ5T319 152 aa22.71■■□□□ 1.23
LTBR-215ENST00000546296 RAPGEF4Q8WZA2 1011 aa22.7■■□□□ 1.22
LTBR-215ENST00000546296 EYA1Q99502 592 aa22.7■■□□□ 1.22
LTBR-215ENST00000546296 FAM208AQ9UK61 1670 aaKnown RBP22.69■■□□□ 1.22
LTBR-215ENST00000546296 DISP2A7MBM2 1401 aa22.69■■□□□ 1.22
LTBR-215ENST00000546296 PPP2R1AP30153 589 aa22.69■■□□□ 1.22
LTBR-215ENST00000546296 TATP17735 454 aaPredicted RBP22.68■■□□□ 1.22
LTBR-215ENST00000546296 BRWD3Q6RI45 1802 aa22.68■■□□□ 1.22
LTBR-215ENST00000546296 FAM196AQ6ZSG2 479 aa22.67■■□□□ 1.22
LTBR-215ENST00000546296 UPF1Q92900 1129 aaKnown RBP eCLIP22.67■■□□□ 1.22
LTBR-215ENST00000546296 CFAP53Q96M91 514 aa22.67■■□□□ 1.22
LTBR-215ENST00000546296 DIAPH1O60610 1272 aaKnown RBP22.66■■□□□ 1.22
LTBR-215ENST00000546296 IL13P35225 146 aa22.66■■□□□ 1.22
LTBR-215ENST00000546296 RALBP1Q15311 655 aa22.66■■□□□ 1.22
LTBR-215ENST00000546296 MARCH10Q8NA82 808 aaPredicted RBP22.64■■□□□ 1.21
LTBR-215ENST00000546296 ZCRB1Q8TBF4 217 aaKnown RBP22.64■■□□□ 1.21
LTBR-215ENST00000546296 DDX54Q8TDD1 881 aaKnown RBP22.64■■□□□ 1.21
LTBR-215ENST00000546296 PARP4Q9UKK3 1724 aaKnown RBP22.64■■□□□ 1.21
LTBR-215ENST00000546296 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
LTBR-215ENST00000546296 RGPD2P0DJD1 1756 aa22.63■■□□□ 1.21
LTBR-215ENST00000546296 IGSF1Q8N6C5 1336 aa22.62■■□□□ 1.21
LTBR-215ENST00000546296 SF3B2Q13435 895 aaKnown RBP22.61■■□□□ 1.21
LTBR-215ENST00000546296 TNS2Q63HR2 1409 aa22.61■■□□□ 1.21
LTBR-215ENST00000546296 CCDC125Q86Z20 511 aa22.61■■□□□ 1.21
LTBR-215ENST00000546296 MEGF6O75095 1541 aa22.61■■□□□ 1.21
LTBR-215ENST00000546296 LRRC37A3O60309 1634 aa22.6■■□□□ 1.21
LTBR-215ENST00000546296 WNK3Q9BYP7 1800 aa22.6■■□□□ 1.21
LTBR-215ENST00000546296 SULT6B1Q6IMI4 303 aa22.6■■□□□ 1.21
LTBR-215ENST00000546296 OVOS2A0A0G2JMS6 1433 aa22.59■■□□□ 1.21
LTBR-215ENST00000546296 U2SURPO15042 1029 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms