RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 TCP11L2Q8N4U5 519 aa16.57■□□□□ 0.24
NECAP1-209ENST00000546181 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
NECAP1-209ENST00000546181 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
NECAP1-209ENST00000546181 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
NECAP1-209ENST00000546181 PDE3BQ13370 1112 aa16.56■□□□□ 0.24
NECAP1-209ENST00000546181 CAMKK2Q96RR4 588 aa16.56■□□□□ 0.24
NECAP1-209ENST00000546181 EVC2Q86UK5 1308 aa16.55■□□□□ 0.24
NECAP1-209ENST00000546181 SOX12O15370 315 aa16.55■□□□□ 0.24
NECAP1-209ENST00000546181 APBA3O96018 575 aa16.55■□□□□ 0.24
NECAP1-209ENST00000546181 RREB1Q92766 1687 aa16.55■□□□□ 0.24
NECAP1-209ENST00000546181 NUP188Q5SRE5 1749 aa16.54■□□□□ 0.24
NECAP1-209ENST00000546181 LRRC37A3O60309 1634 aa16.54■□□□□ 0.24
NECAP1-209ENST00000546181 AXIN2Q9Y2T1 843 aa16.53■□□□□ 0.24
NECAP1-209ENST00000546181 WNK3Q9BYP7 1800 aa16.53■□□□□ 0.24
NECAP1-209ENST00000546181 CRB1P82279 1406 aa16.53■□□□□ 0.24
NECAP1-209ENST00000546181 BRD4O60885 1362 aaPredicted RBP16.52■□□□□ 0.24
NECAP1-209ENST00000546181 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
NECAP1-209ENST00000546181 TTC21BQ7Z4L5 1316 aa16.52■□□□□ 0.24
NECAP1-209ENST00000546181 PEAK1Q9H792 1746 aa16.52■□□□□ 0.24
NECAP1-209ENST00000546181 SBF2Q86WG5 1849 aa16.5■□□□□ 0.23
NECAP1-209ENST00000546181 TOM1L2Q6ZVM7 507 aa16.5■□□□□ 0.23
NECAP1-209ENST00000546181 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
NECAP1-209ENST00000546181 CPSF1Q10570 1443 aaKnown RBP16.5■□□□□ 0.23
NECAP1-209ENST00000546181 MON2Q7Z3U7 1717 aa16.5■□□□□ 0.23
NECAP1-209ENST00000546181 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
NECAP1-209ENST00000546181 NFAT5O94916 1531 aa16.48■□□□□ 0.23
NECAP1-209ENST00000546181 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
NECAP1-209ENST00000546181 ARHGEF25Q86VW2 580 aa16.47■□□□□ 0.23
NECAP1-209ENST00000546181 WDR17Q8IZU2 1322 aa16.46■□□□□ 0.23
NECAP1-209ENST00000546181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.46■□□□□ 0.23
NECAP1-209ENST00000546181 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.23
NECAP1-209ENST00000546181 CD163L1Q9NR16 1453 aa16.46■□□□□ 0.23
NECAP1-209ENST00000546181 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
NECAP1-209ENST00000546181 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
NECAP1-209ENST00000546181 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
NECAP1-209ENST00000546181 ZBTB22O15209 634 aa16.45■□□□□ 0.22
NECAP1-209ENST00000546181 DDB1Q16531 1140 aa16.45■□□□□ 0.22
NECAP1-209ENST00000546181 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
NECAP1-209ENST00000546181 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
NECAP1-209ENST00000546181 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
NECAP1-209ENST00000546181 CSB-PGBD3P0DP91 1061 aa16.43■□□□□ 0.22
NECAP1-209ENST00000546181 NME9Q86XW9 330 aa16.43■□□□□ 0.22
NECAP1-209ENST00000546181 MARCH10Q8NA82 808 aaPredicted RBP16.43■□□□□ 0.22
NECAP1-209ENST00000546181 LTN1O94822 1766 aa16.43■□□□□ 0.22
NECAP1-209ENST00000546181 KCNH5Q8NCM2 988 aa16.42■□□□□ 0.22
NECAP1-209ENST00000546181 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
NECAP1-209ENST00000546181 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
NECAP1-209ENST00000546181 USP54Q70EL1 1684 aa16.41■□□□□ 0.22
NECAP1-209ENST00000546181 SLC12A5Q9H2X9 1139 aa16.41■□□□□ 0.22
NECAP1-209ENST00000546181 RGPD3A6NKT7 1758 aaPredicted RBP16.4■□□□□ 0.22
NECAP1-209ENST00000546181 RGPD4Q7Z3J3 1758 aa16.4■□□□□ 0.22
NECAP1-209ENST00000546181 TONSLQ96HA7 1378 aa16.39■□□□□ 0.21
NECAP1-209ENST00000546181 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
NECAP1-209ENST00000546181 CARD10Q9BWT7 1032 aa16.39■□□□□ 0.21
NECAP1-209ENST00000546181 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
NECAP1-209ENST00000546181 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
NECAP1-209ENST00000546181 PDGFDQ9GZP0 370 aaPredicted RBP16.37■□□□□ 0.21
NECAP1-209ENST00000546181 ATF5Q9Y2D1 282 aaPredicted RBP16.37■□□□□ 0.21
NECAP1-209ENST00000546181 A0A1W2PP64 1363 aa16.37■□□□□ 0.21
NECAP1-209ENST00000546181 PROM2Q8N271 834 aa16.36■□□□□ 0.21
NECAP1-209ENST00000546181 BCL11BQ9C0K0 894 aaPredicted RBP16.36■□□□□ 0.21
NECAP1-209ENST00000546181 ABCC6O95255 1503 aa16.35■□□□□ 0.21
NECAP1-209ENST00000546181 KCNQ2O43526 872 aa16.35■□□□□ 0.21
NECAP1-209ENST00000546181 ERBB3P21860 1342 aa16.35■□□□□ 0.21
NECAP1-209ENST00000546181 CASZ1Q86V15 1759 aa16.35■□□□□ 0.21
NECAP1-209ENST00000546181 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
NECAP1-209ENST00000546181 PLSCR1O15162 318 aa16.34■□□□□ 0.21
NECAP1-209ENST00000546181 HDGFL2Q7Z4V5 671 aaPredicted RBP16.34■□□□□ 0.21
NECAP1-209ENST00000546181 CDCA7Q9BWT1 371 aaPredicted RBP16.34■□□□□ 0.21
NECAP1-209ENST00000546181 NLRP2Q9NX02 1062 aa16.34■□□□□ 0.21
NECAP1-209ENST00000546181 CCDC7Q96M83 1385 aa16.34■□□□□ 0.21
NECAP1-209ENST00000546181 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
NECAP1-209ENST00000546181 C11orf95C9JLR9 678 aaPredicted RBP16.33■□□□□ 0.2
NECAP1-209ENST00000546181 EXOC5O00471 708 aa16.33■□□□□ 0.2
NECAP1-209ENST00000546181 ACSBG1Q96GR2 724 aa16.33■□□□□ 0.2
NECAP1-209ENST00000546181 NHSQ6T4R5 1651 aa16.33■□□□□ 0.2
NECAP1-209ENST00000546181 BCL9O00512 1426 aa16.32■□□□□ 0.2
NECAP1-209ENST00000546181 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
NECAP1-209ENST00000546181 TESK2Q96S53 571 aa16.32■□□□□ 0.2
NECAP1-209ENST00000546181 KAT6BQ8WYB5 2073 aa16.31■□□□□ 0.2
NECAP1-209ENST00000546181 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
NECAP1-209ENST00000546181 FBLN1P23142 703 aa16.31■□□□□ 0.2
NECAP1-209ENST00000546181 POLA2Q14181 598 aa16.31■□□□□ 0.2
NECAP1-209ENST00000546181 SPON1Q9HCB6 807 aa16.31■□□□□ 0.2
NECAP1-209ENST00000546181 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
NECAP1-209ENST00000546181 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
NECAP1-209ENST00000546181 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
NECAP1-209ENST00000546181 RGPD2P0DJD1 1756 aa16.3■□□□□ 0.2
NECAP1-209ENST00000546181 BTAF1O14981 1849 aa16.29■□□□□ 0.2
NECAP1-209ENST00000546181 PPP1R1BQ9UD71 204 aaPredicted RBP16.29■□□□□ 0.2
NECAP1-209ENST00000546181 MYOM1P52179 1685 aa16.28■□□□□ 0.2
NECAP1-209ENST00000546181 ZBTB7AO95365 584 aa16.28■□□□□ 0.2
NECAP1-209ENST00000546181 IL2RBP14784 551 aa16.28■□□□□ 0.2
NECAP1-209ENST00000546181 FAM208AQ9UK61 1670 aaKnown RBP16.25■□□□□ 0.19
NECAP1-209ENST00000546181 IP6K1Q92551 441 aa16.25■□□□□ 0.19
NECAP1-209ENST00000546181 PAPPAQ13219 1627 aa16.25■□□□□ 0.19
NECAP1-209ENST00000546181 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
NECAP1-209ENST00000546181 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
NECAP1-209ENST00000546181 STK32BQ9NY57 414 aa16.24■□□□□ 0.19
NECAP1-209ENST00000546181 SHANK3Q9BYB0 1731 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms