RNA–Protein interactions for RNA: ENST00000545517.2

LRCOL1-204, Transcript of leucine rich colipase like 1, humanhuman

TSL 5

Gene LRCOL1, Length 921 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-204ENST00000545517 RGS12O14924 1447 aa22.65■■□□□ 1.22
LRCOL1-204ENST00000545517 ARHGEF25Q86VW2 580 aa22.64■■□□□ 1.21
LRCOL1-204ENST00000545517 TRPC5Q9UL62 973 aaPredicted RBP22.64■■□□□ 1.21
LRCOL1-204ENST00000545517 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
LRCOL1-204ENST00000545517 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
LRCOL1-204ENST00000545517 FBLN1P23142 703 aa22.61■■□□□ 1.21
LRCOL1-204ENST00000545517 PARP4Q9UKK3 1724 aaKnown RBP22.61■■□□□ 1.21
LRCOL1-204ENST00000545517 VPS72Q15906 364 aa22.6■■□□□ 1.21
LRCOL1-204ENST00000545517 RXRBP28702 533 aa22.59■■□□□ 1.21
LRCOL1-204ENST00000545517 RBM6P78332 1123 aaKnown RBP22.59■■□□□ 1.21
LRCOL1-204ENST00000545517 STRN4Q9NRL3 753 aa22.59■■□□□ 1.21
LRCOL1-204ENST00000545517 AXIN2Q9Y2T1 843 aa22.59■■□□□ 1.21
LRCOL1-204ENST00000545517 NSD2O96028 1365 aa22.58■■□□□ 1.21
LRCOL1-204ENST00000545517 LRRC37A3O60309 1634 aa22.57■■□□□ 1.2
LRCOL1-204ENST00000545517 GJD4Q96KN9 370 aaPredicted RBP22.57■■□□□ 1.2
LRCOL1-204ENST00000545517 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
LRCOL1-204ENST00000545517 CCDC9Q9Y3X0 531 aaKnown RBP22.56■■□□□ 1.2
LRCOL1-204ENST00000545517 RRS1Q15050 365 aaKnown RBP22.55■■□□□ 1.2
LRCOL1-204ENST00000545517 LARP1Q6PKG0 1096 aaKnown RBP22.55■■□□□ 1.2
LRCOL1-204ENST00000545517 BLMP54132 1417 aaPredicted RBP22.55■■□□□ 1.2
LRCOL1-204ENST00000545517 SPATA31A5Q5VU36 1347 aa22.55■■□□□ 1.2
LRCOL1-204ENST00000545517 SPATA31A7Q8IWB4 1347 aa22.55■■□□□ 1.2
LRCOL1-204ENST00000545517 RTL1A6NKG5 1358 aa22.54■■□□□ 1.2
LRCOL1-204ENST00000545517 PER1O15534 1290 aaPredicted RBP22.54■■□□□ 1.2
LRCOL1-204ENST00000545517 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
LRCOL1-204ENST00000545517 KNSTRNQ9Y448 316 aa22.54■■□□□ 1.2
LRCOL1-204ENST00000545517 CRB1P82279 1406 aa22.54■■□□□ 1.2
LRCOL1-204ENST00000545517 SHANK3Q9BYB0 1731 aa22.52■■□□□ 1.2
LRCOL1-204ENST00000545517 EVA1CP58658 441 aa22.52■■□□□ 1.2
LRCOL1-204ENST00000545517 SPATA31A1Q5TZJ5 1347 aa22.52■■□□□ 1.2
LRCOL1-204ENST00000545517 WDR17Q8IZU2 1322 aa22.51■■□□□ 1.19
LRCOL1-204ENST00000545517 EP400Q96L91 3159 aa22.5■■□□□ 1.19
LRCOL1-204ENST00000545517 ERBB3P21860 1342 aa22.5■■□□□ 1.19
LRCOL1-204ENST00000545517 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
LRCOL1-204ENST00000545517 HOXC9P31274 260 aa22.49■■□□□ 1.19
LRCOL1-204ENST00000545517 TNNT2P45379 298 aaPredicted RBP22.49■■□□□ 1.19
LRCOL1-204ENST00000545517 EMILIN1Q9Y6C2 1016 aa22.49■■□□□ 1.19
LRCOL1-204ENST00000545517 SBF2Q86WG5 1849 aa22.49■■□□□ 1.19
LRCOL1-204ENST00000545517 IP6K1Q92551 441 aa22.48■■□□□ 1.19
LRCOL1-204ENST00000545517 USP35Q9P2H5 1018 aa22.48■■□□□ 1.19
LRCOL1-204ENST00000545517 FLT4P35916 1363 aa22.48■■□□□ 1.19
LRCOL1-204ENST00000545517 AMPHP49418 695 aa22.47■■□□□ 1.19
LRCOL1-204ENST00000545517 FAM98CQ17RN3 349 aaKnown RBP22.47■■□□□ 1.19
LRCOL1-204ENST00000545517 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
LRCOL1-204ENST00000545517 CC2D1BQ5T0F9 858 aaKnown RBP22.46■■□□□ 1.19
LRCOL1-204ENST00000545517 KIF24Q5T7B8 1368 aa22.46■■□□□ 1.19
LRCOL1-204ENST00000545517 NPC1L1Q9UHC9 1359 aa22.46■■□□□ 1.19
LRCOL1-204ENST00000545517 TOM1L2Q6ZVM7 507 aa22.45■■□□□ 1.18
LRCOL1-204ENST00000545517 MORC1Q86VD1 984 aa22.45■■□□□ 1.18
LRCOL1-204ENST00000545517 ANKRD24Q8TF21 1146 aa22.45■■□□□ 1.18
LRCOL1-204ENST00000545517 CSB-PGBD3P0DP91 1061 aa22.44■■□□□ 1.18
LRCOL1-204ENST00000545517 INSRP06213 1382 aa22.43■■□□□ 1.18
LRCOL1-204ENST00000545517 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
LRCOL1-204ENST00000545517 LTV1Q96GA3 475 aaPredicted RBP22.43■■□□□ 1.18
LRCOL1-204ENST00000545517 POLKQ9UBT6 870 aa22.43■■□□□ 1.18
LRCOL1-204ENST00000545517 DISP2A7MBM2 1401 aa22.42■■□□□ 1.18
LRCOL1-204ENST00000545517 ONECUT3O60422 494 aaPredicted RBP22.42■■□□□ 1.18
LRCOL1-204ENST00000545517 SEPT12Q8IYM1 358 aa22.42■■□□□ 1.18
LRCOL1-204ENST00000545517 TCP11L2Q8N4U5 519 aa22.42■■□□□ 1.18
LRCOL1-204ENST00000545517 TNS1Q9HBL0 1735 aaKnown RBP22.42■■□□□ 1.18
LRCOL1-204ENST00000545517 VIRMAQ69YN4 1812 aaKnown RBP22.41■■□□□ 1.18
LRCOL1-204ENST00000545517 PKD1L3Q7Z443 1732 aa22.41■■□□□ 1.18
LRCOL1-204ENST00000545517 HSP90AB2PQ58FF8 381 aa22.41■■□□□ 1.18
LRCOL1-204ENST00000545517 A0A0G2JS52 829 aa22.4■■□□□ 1.18
LRCOL1-204ENST00000545517 PPM1GO15355 546 aaPredicted RBP22.4■■□□□ 1.18
LRCOL1-204ENST00000545517 MYT1Q01538 1121 aa22.4■■□□□ 1.18
LRCOL1-204ENST00000545517 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
LRCOL1-204ENST00000545517 CARD10Q9BWT7 1032 aa22.39■■□□□ 1.17
LRCOL1-204ENST00000545517 DDX10Q13206 875 aaKnown RBP22.38■■□□□ 1.17
LRCOL1-204ENST00000545517 NLRP2Q9NX02 1062 aa22.38■■□□□ 1.17
LRCOL1-204ENST00000545517 THRAP3Q9Y2W1 955 aaKnown RBP22.38■■□□□ 1.17
LRCOL1-204ENST00000545517 KAT6BQ8WYB5 2073 aa22.37■■□□□ 1.17
LRCOL1-204ENST00000545517 MEGF6O75095 1541 aa22.36■■□□□ 1.17
LRCOL1-204ENST00000545517 COL3A1P02461 1466 aaPredicted RBP22.35■■□□□ 1.17
LRCOL1-204ENST00000545517 NCAPD2Q15021 1401 aa22.35■■□□□ 1.17
LRCOL1-204ENST00000545517 DOT1LQ8TEK3 1739 aa22.34■■□□□ 1.17
LRCOL1-204ENST00000545517 TNS2Q63HR2 1409 aa22.34■■□□□ 1.17
LRCOL1-204ENST00000545517 SOCS7O14512 581 aa22.33■■□□□ 1.17
LRCOL1-204ENST00000545517 USHBP1Q8N6Y0 703 aa22.33■■□□□ 1.17
LRCOL1-204ENST00000545517 NBPF6Q5VWK0 638 aa22.32■■□□□ 1.16
LRCOL1-204ENST00000545517 NBPF4Q96M43 638 aa22.32■■□□□ 1.16
LRCOL1-204ENST00000545517 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
LRCOL1-204ENST00000545517 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
LRCOL1-204ENST00000545517 KRT27Q7Z3Y8 459 aa22.31■■□□□ 1.16
LRCOL1-204ENST00000545517 EIF4A2Q14240 407 aaKnown RBP22.3■■□□□ 1.16
LRCOL1-204ENST00000545517 FAM182BQ5T319 152 aa22.3■■□□□ 1.16
LRCOL1-204ENST00000545517 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
LRCOL1-204ENST00000545517 ITGB4P16144 1822 aa22.29■■□□□ 1.16
LRCOL1-204ENST00000545517 TOGARAM1Q9Y4F4 1720 aa22.28■■□□□ 1.16
LRCOL1-204ENST00000545517 MTHFSP49914 203 aa22.28■■□□□ 1.16
LRCOL1-204ENST00000545517 OVOS2A0A0G2JMS6 1433 aa22.28■■□□□ 1.16
LRCOL1-204ENST00000545517 IL2RBP14784 551 aa22.27■■□□□ 1.16
LRCOL1-204ENST00000545517 BTAF1O14981 1849 aa22.27■■□□□ 1.15
LRCOL1-204ENST00000545517 CDCA7Q9BWT1 371 aaPredicted RBP22.26■■□□□ 1.15
LRCOL1-204ENST00000545517 DDB1Q16531 1140 aa22.25■■□□□ 1.15
LRCOL1-204ENST00000545517 EYA1Q99502 592 aa22.25■■□□□ 1.15
LRCOL1-204ENST00000545517 PPP2R1AP30153 589 aa22.23■■□□□ 1.15
LRCOL1-204ENST00000545517 UPF1Q92900 1129 aaKnown RBP eCLIP22.23■■□□□ 1.15
LRCOL1-204ENST00000545517 IGSF1Q8N6C5 1336 aa22.23■■□□□ 1.15
LRCOL1-204ENST00000545517 PDE3BQ13370 1112 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms