RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
LTBR-214ENST00000545445 PEAK1Q9H792 1746 aa16.43■□□□□ 0.22
LTBR-214ENST00000545445 ZBTB7AO95365 584 aa16.43■□□□□ 0.22
LTBR-214ENST00000545445 CABP2Q9NPB3 220 aa16.43■□□□□ 0.22
LTBR-214ENST00000545445 THRAP3Q9Y2W1 955 aaKnown RBP16.43■□□□□ 0.22
LTBR-214ENST00000545445 MYOM1P52179 1685 aa16.42■□□□□ 0.22
LTBR-214ENST00000545445 TOPAZ1Q8N9V7 1692 aa16.42■□□□□ 0.22
LTBR-214ENST00000545445 UTRNP46939 3433 aa16.41■□□□□ 0.22
LTBR-214ENST00000545445 PTF1AQ7RTS3 328 aa16.41■□□□□ 0.22
LTBR-214ENST00000545445 ABTB2Q8N961 1025 aa16.41■□□□□ 0.22
LTBR-214ENST00000545445 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
LTBR-214ENST00000545445 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
LTBR-214ENST00000545445 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
LTBR-214ENST00000545445 CRB1P82279 1406 aa16.4■□□□□ 0.22
LTBR-214ENST00000545445 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
LTBR-214ENST00000545445 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
LTBR-214ENST00000545445 PLEKHG3A1L390 1219 aa16.39■□□□□ 0.21
LTBR-214ENST00000545445 PLSCR1O15162 318 aa16.39■□□□□ 0.21
LTBR-214ENST00000545445 PTGER2P43116 358 aa16.39■□□□□ 0.21
LTBR-214ENST00000545445 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
LTBR-214ENST00000545445 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
LTBR-214ENST00000545445 GCP02774 474 aa16.38■□□□□ 0.21
LTBR-214ENST00000545445 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
LTBR-214ENST00000545445 KIF7Q2M1P5 1343 aa16.37■□□□□ 0.21
LTBR-214ENST00000545445 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
LTBR-214ENST00000545445 DDB1Q16531 1140 aa16.36■□□□□ 0.21
LTBR-214ENST00000545445 PROM2Q8N271 834 aa16.36■□□□□ 0.21
LTBR-214ENST00000545445 FHDC1Q9C0D6 1143 aaPredicted RBP16.36■□□□□ 0.21
LTBR-214ENST00000545445 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
LTBR-214ENST00000545445 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
LTBR-214ENST00000545445 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
LTBR-214ENST00000545445 NLRP13Q86W25 1043 aa16.35■□□□□ 0.21
LTBR-214ENST00000545445 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
LTBR-214ENST00000545445 SBF2Q86WG5 1849 aa16.34■□□□□ 0.21
LTBR-214ENST00000545445 POLR3GLQ9BT43 218 aa16.34■□□□□ 0.21
LTBR-214ENST00000545445 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
LTBR-214ENST00000545445 TERF2IPQ9NYB0 399 aa16.34■□□□□ 0.21
LTBR-214ENST00000545445 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
LTBR-214ENST00000545445 TOM1L2Q6ZVM7 507 aa16.33■□□□□ 0.2
LTBR-214ENST00000545445 MARCH10Q8NA82 808 aaPredicted RBP16.33■□□□□ 0.2
LTBR-214ENST00000545445 SYT17Q9BSW7 474 aa16.33■□□□□ 0.2
LTBR-214ENST00000545445 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
LTBR-214ENST00000545445 STK32BQ9NY57 414 aa16.33■□□□□ 0.2
LTBR-214ENST00000545445 C1QTNF8P60827 252 aa16.32■□□□□ 0.2
LTBR-214ENST00000545445 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
LTBR-214ENST00000545445 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
LTBR-214ENST00000545445 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
LTBR-214ENST00000545445 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
LTBR-214ENST00000545445 SLIT3O75094 1523 aa16.3■□□□□ 0.2
LTBR-214ENST00000545445 CPSF1Q10570 1443 aaKnown RBP16.3■□□□□ 0.2
LTBR-214ENST00000545445 ANKRD36BQ8N2N9 1353 aa16.3■□□□□ 0.2
LTBR-214ENST00000545445 SLC15A2Q16348 729 aa16.3■□□□□ 0.2
LTBR-214ENST00000545445 MTFR1LQ9H019 292 aa16.3■□□□□ 0.2
LTBR-214ENST00000545445 BCL9O00512 1426 aa16.29■□□□□ 0.2
LTBR-214ENST00000545445 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
LTBR-214ENST00000545445 SGIP1Q9BQI5 828 aa16.29■□□□□ 0.2
LTBR-214ENST00000545445 WDR17Q8IZU2 1322 aa16.28■□□□□ 0.2
LTBR-214ENST00000545445 NLRP6P59044 892 aa16.28■□□□□ 0.2
LTBR-214ENST00000545445 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.2
LTBR-214ENST00000545445 USP6P35125 1406 aa16.27■□□□□ 0.19
LTBR-214ENST00000545445 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
LTBR-214ENST00000545445 CD163L1Q9NR16 1453 aa16.26■□□□□ 0.19
LTBR-214ENST00000545445 COL18A1P39060 1754 aa16.26■□□□□ 0.19
LTBR-214ENST00000545445 AKAP12Q02952 1782 aa16.26■□□□□ 0.19
LTBR-214ENST00000545445 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
LTBR-214ENST00000545445 ARXQ96QS3 562 aa16.25■□□□□ 0.19
LTBR-214ENST00000545445 CDCA7Q9BWT1 371 aaPredicted RBP16.25■□□□□ 0.19
LTBR-214ENST00000545445 PANK3Q9H999 370 aa16.25■□□□□ 0.19
LTBR-214ENST00000545445 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
LTBR-214ENST00000545445 IFFO2Q5TF58 517 aa16.24■□□□□ 0.19
LTBR-214ENST00000545445 EDC4Q6P2E9 1401 aaKnown RBP16.24■□□□□ 0.19
LTBR-214ENST00000545445 TTC21AQ8NDW8 1320 aa16.23■□□□□ 0.19
LTBR-214ENST00000545445 TNS2Q63HR2 1409 aa16.23■□□□□ 0.19
LTBR-214ENST00000545445 SOX12O15370 315 aa16.23■□□□□ 0.19
LTBR-214ENST00000545445 CSB-PGBD3P0DP91 1061 aa16.23■□□□□ 0.19
LTBR-214ENST00000545445 MAP3K5Q99683 1374 aa16.23■□□□□ 0.19
LTBR-214ENST00000545445 CARD10Q9BWT7 1032 aa16.22■□□□□ 0.19
LTBR-214ENST00000545445 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
LTBR-214ENST00000545445 TTC21BQ7Z4L5 1316 aa16.21■□□□□ 0.19
LTBR-214ENST00000545445 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
LTBR-214ENST00000545445 GPR162Q16538 588 aa16.21■□□□□ 0.19
LTBR-214ENST00000545445 ACSBG1Q96GR2 724 aa16.21■□□□□ 0.19
LTBR-214ENST00000545445 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
LTBR-214ENST00000545445 CHD4Q14839 1912 aa16.21■□□□□ 0.19
LTBR-214ENST00000545445 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
LTBR-214ENST00000545445 EXOC5O00471 708 aa16.2■□□□□ 0.18
LTBR-214ENST00000545445 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
LTBR-214ENST00000545445 ARHGEF25Q86VW2 580 aa16.2■□□□□ 0.18
LTBR-214ENST00000545445 CARD14Q9BXL6 1004 aa16.2■□□□□ 0.18
LTBR-214ENST00000545445 NHSQ6T4R5 1651 aa16.2■□□□□ 0.18
LTBR-214ENST00000545445 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
LTBR-214ENST00000545445 CEP350Q5VT06 3117 aa16.19■□□□□ 0.18
LTBR-214ENST00000545445 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
LTBR-214ENST00000545445 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
LTBR-214ENST00000545445 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
LTBR-214ENST00000545445 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
LTBR-214ENST00000545445 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
LTBR-214ENST00000545445 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
LTBR-214ENST00000545445 ABCC6O95255 1503 aa16.17■□□□□ 0.18
LTBR-214ENST00000545445 NSD2O96028 1365 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms