RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 NLRP6P59044 892 aa21.49■■□□□ 1.03
RTN3-214ENST00000545432 WDR17Q8IZU2 1322 aa21.49■■□□□ 1.03
RTN3-214ENST00000545432 COL18A1P39060 1754 aa21.48■■□□□ 1.03
RTN3-214ENST00000545432 LRRC37A3O60309 1634 aa21.48■■□□□ 1.03
RTN3-214ENST00000545432 TOM1L2Q6ZVM7 507 aa21.47■■□□□ 1.03
RTN3-214ENST00000545432 SGIP1Q9BQI5 828 aa21.47■■□□□ 1.03
RTN3-214ENST00000545432 CABP2Q9NPB3 220 aa21.47■■□□□ 1.03
RTN3-214ENST00000545432 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
RTN3-214ENST00000545432 SRPK2P78362 688 aaKnown RBP21.46■■□□□ 1.03
RTN3-214ENST00000545432 ARHGEF25Q86VW2 580 aa21.46■■□□□ 1.03
RTN3-214ENST00000545432 ZNF784Q8NCA9 323 aaPredicted RBP21.46■■□□□ 1.03
RTN3-214ENST00000545432 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
RTN3-214ENST00000545432 SYT17Q9BSW7 474 aa21.45■■□□□ 1.02
RTN3-214ENST00000545432 CARD10Q9BWT7 1032 aa21.45■■□□□ 1.02
RTN3-214ENST00000545432 ZBTB7AO95365 584 aa21.44■■□□□ 1.02
RTN3-214ENST00000545432 SLC15A2Q16348 729 aa21.44■■□□□ 1.02
RTN3-214ENST00000545432 TXNRD1Q16881 649 aa21.44■■□□□ 1.02
RTN3-214ENST00000545432 UTRNP46939 3433 aa21.43■■□□□ 1.02
RTN3-214ENST00000545432 CPSF1Q10570 1443 aaKnown RBP21.41■■□□□ 1.02
RTN3-214ENST00000545432 STK32BQ9NY57 414 aa21.41■■□□□ 1.02
RTN3-214ENST00000545432 ZNF692Q9BU19 519 aaPredicted RBP21.4■■□□□ 1.02
RTN3-214ENST00000545432 MTFR1LQ9H019 292 aa21.4■■□□□ 1.02
RTN3-214ENST00000545432 ATF5Q9Y2D1 282 aaPredicted RBP21.4■■□□□ 1.02
RTN3-214ENST00000545432 EXOC5O00471 708 aa21.39■■□□□ 1.01
RTN3-214ENST00000545432 KCNH5Q8NCM2 988 aa21.39■■□□□ 1.01
RTN3-214ENST00000545432 FHDC1Q9C0D6 1143 aaPredicted RBP21.39■■□□□ 1.01
RTN3-214ENST00000545432 MYOM1P52179 1685 aa21.37■■□□□ 1.01
RTN3-214ENST00000545432 MAP3K5Q99683 1374 aa21.37■■□□□ 1.01
RTN3-214ENST00000545432 TTC21BQ7Z4L5 1316 aa21.37■■□□□ 1.01
RTN3-214ENST00000545432 PIK3C2AO00443 1686 aa21.37■■□□□ 1.01
RTN3-214ENST00000545432 ZBTB7CA1YPR0 619 aa21.36■■□□□ 1.01
RTN3-214ENST00000545432 WNK3Q9BYP7 1800 aa21.36■■□□□ 1.01
RTN3-214ENST00000545432 CCDC7Q96M83 1385 aa21.36■■□□□ 1.01
RTN3-214ENST00000545432 TTC21AQ8NDW8 1320 aa21.33■■□□□ 1.01
RTN3-214ENST00000545432 ABCC6O95255 1503 aa21.33■■□□□ 1
RTN3-214ENST00000545432 EVC2Q86UK5 1308 aa21.32■■□□□ 1
RTN3-214ENST00000545432 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
RTN3-214ENST00000545432 TNS2Q63HR2 1409 aa21.31■■□□□ 1
RTN3-214ENST00000545432 C1QTNF8P60827 252 aa21.31■■□□□ 1
RTN3-214ENST00000545432 ARXQ96QS3 562 aa21.31■■□□□ 1
RTN3-214ENST00000545432 AKAP12Q02952 1782 aa21.31■■□□□ 1
RTN3-214ENST00000545432 NFAT5O94916 1531 aa21.3■■□□□ 1
RTN3-214ENST00000545432 CSB-PGBD3P0DP91 1061 aa21.29■■□□□ 1
RTN3-214ENST00000545432 PAPPAQ13219 1627 aa21.29■■□□□ 1
RTN3-214ENST00000545432 QRICH2Q9H0J4 1663 aa21.28■■□□□ 1
RTN3-214ENST00000545432 USP31Q70CQ4 1352 aa21.27■■□□□ 1
RTN3-214ENST00000545432 RGPD5Q99666 1765 aa21.26■□□□□ 0.99
RTN3-214ENST00000545432 CHD4Q14839 1912 aa21.26■□□□□ 0.99
RTN3-214ENST00000545432 NHSQ6T4R5 1651 aa21.26■□□□□ 0.99
RTN3-214ENST00000545432 ERBB3P21860 1342 aa21.26■□□□□ 0.99
RTN3-214ENST00000545432 SLC16A10Q8TF71 515 aa21.25■□□□□ 0.99
RTN3-214ENST00000545432 LRRC4BQ9NT99 713 aa21.25■□□□□ 0.99
RTN3-214ENST00000545432 AKT1S1Q96B36 256 aa21.24■□□□□ 0.99
RTN3-214ENST00000545432 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
RTN3-214ENST00000545432 ACSBG1Q96GR2 724 aa21.23■□□□□ 0.99
RTN3-214ENST00000545432 SENP3-EIF4A1A0A087X0R7 540 aa21.22■□□□□ 0.99
RTN3-214ENST00000545432 IL2RBP14784 551 aa21.22■□□□□ 0.99
RTN3-214ENST00000545432 L3MBTL2Q969R5 705 aa21.22■□□□□ 0.99
RTN3-214ENST00000545432 SOX12O15370 315 aa21.21■□□□□ 0.99
RTN3-214ENST00000545432 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
RTN3-214ENST00000545432 SLC27A3Q5K4L6 730 aa21.2■□□□□ 0.98
RTN3-214ENST00000545432 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
RTN3-214ENST00000545432 NLRP2Q9NX02 1062 aa21.18■□□□□ 0.98
RTN3-214ENST00000545432 USP54Q70EL1 1684 aa21.18■□□□□ 0.98
RTN3-214ENST00000545432 SBNO2Q9Y2G9 1366 aa21.16■□□□□ 0.98
RTN3-214ENST00000545432 PNPLA7Q6ZV29 1317 aa21.15■□□□□ 0.98
RTN3-214ENST00000545432 GPR162Q16538 588 aa21.15■□□□□ 0.98
RTN3-214ENST00000545432 ANKRD24Q8TF21 1146 aa21.15■□□□□ 0.98
RTN3-214ENST00000545432 BTAF1O14981 1849 aa21.15■□□□□ 0.98
RTN3-214ENST00000545432 CD163L1Q9NR16 1453 aa21.14■□□□□ 0.98
RTN3-214ENST00000545432 QSER1Q2KHR3 1735 aa21.13■□□□□ 0.97
RTN3-214ENST00000545432 IFFO2Q5TF58 517 aa21.12■□□□□ 0.97
RTN3-214ENST00000545432 NME9Q86XW9 330 aa21.12■□□□□ 0.97
RTN3-214ENST00000545432 MON2Q7Z3U7 1717 aa21.12■□□□□ 0.97
RTN3-214ENST00000545432 POLD1P28340 1107 aa21.11■□□□□ 0.97
RTN3-214ENST00000545432 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.11■□□□□ 0.97
RTN3-214ENST00000545432 ROCK2O75116 1388 aaKnown RBP21.1■□□□□ 0.97
RTN3-214ENST00000545432 GIGYF1O75420 1035 aaPredicted RBP21.1■□□□□ 0.97
RTN3-214ENST00000545432 IP6K1Q92551 441 aa21.1■□□□□ 0.97
RTN3-214ENST00000545432 PUS7Q96PZ0 661 aaKnown RBP21.08■□□□□ 0.97
RTN3-214ENST00000545432 GRIN3BO60391 1043 aa21.07■□□□□ 0.96
RTN3-214ENST00000545432 NLGN2Q8NFZ4 835 aa21.07■□□□□ 0.96
RTN3-214ENST00000545432 NSD2O96028 1365 aa21.07■□□□□ 0.96
RTN3-214ENST00000545432 ANKRD36BQ8N2N9 1353 aa21.07■□□□□ 0.96
RTN3-214ENST00000545432 EDC4Q6P2E9 1401 aaKnown RBP21.06■□□□□ 0.96
RTN3-214ENST00000545432 TFCP2L1Q9NZI6 479 aa21.06■□□□□ 0.96
RTN3-214ENST00000545432 SHANK3Q9BYB0 1731 aa21.05■□□□□ 0.96
RTN3-214ENST00000545432 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
RTN3-214ENST00000545432 DDX54Q8TDD1 881 aaKnown RBP21.05■□□□□ 0.96
RTN3-214ENST00000545432 SLC12A5Q9H2X9 1139 aa21.05■□□□□ 0.96
RTN3-214ENST00000545432 GOLGB1Q14789 3259 aaKnown RBP21.04■□□□□ 0.96
RTN3-214ENST00000545432 YBX3P16989 372 aaKnown RBP eCLIP21.04■□□□□ 0.96
RTN3-214ENST00000545432 KAT6BQ8WYB5 2073 aa21.04■□□□□ 0.96
RTN3-214ENST00000545432 HDGFL2Q7Z4V5 671 aaPredicted RBP21.03■□□□□ 0.96
RTN3-214ENST00000545432 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
RTN3-214ENST00000545432 LTN1O94822 1766 aa21.02■□□□□ 0.96
RTN3-214ENST00000545432 KCNQ4P56696 695 aa21.02■□□□□ 0.96
RTN3-214ENST00000545432 COL23A1Q86Y22 540 aaPredicted RBP21.01■□□□□ 0.95
RTN3-214ENST00000545432 LY75O60449 1722 aa21■□□□□ 0.95
RTN3-214ENST00000545432 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms