RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 ADGRB1O14514 1584 aa10.79□□□□□ -0.68
COPA-207ENST00000545284 TOM1L2Q6ZVM7 507 aa10.79□□□□□ -0.68
COPA-207ENST00000545284 MARCH10Q8NA82 808 aaPredicted RBP10.79□□□□□ -0.68
COPA-207ENST00000545284 CHD4Q14839 1912 aa10.79□□□□□ -0.68
COPA-207ENST00000545284 MYOM1P52179 1685 aa10.79□□□□□ -0.68
COPA-207ENST00000545284 LMO7Q8WWI1 1683 aa10.78□□□□□ -0.68
COPA-207ENST00000545284 CEP350Q5VT06 3117 aa10.78□□□□□ -0.68
COPA-207ENST00000545284 PHRF1Q9P1Y6 1649 aaKnown RBP10.77□□□□□ -0.68
COPA-207ENST00000545284 EXOC5O00471 708 aa10.77□□□□□ -0.69
COPA-207ENST00000545284 POLD1P28340 1107 aa10.77□□□□□ -0.69
COPA-207ENST00000545284 PTF1AQ7RTS3 328 aa10.77□□□□□ -0.69
COPA-207ENST00000545284 CDK19Q9BWU1 502 aa10.77□□□□□ -0.69
COPA-207ENST00000545284 WDR17Q8IZU2 1322 aa10.77□□□□□ -0.69
COPA-207ENST00000545284 HSPA6P17066 643 aa10.76□□□□□ -0.69
COPA-207ENST00000545284 CARD10Q9BWT7 1032 aa10.75□□□□□ -0.69
COPA-207ENST00000545284 ITSN1Q15811 1721 aa10.73□□□□□ -0.69
COPA-207ENST00000545284 NLRP6P59044 892 aa10.73□□□□□ -0.69
COPA-207ENST00000545284 SLC27A3Q5K4L6 730 aa10.72□□□□□ -0.69
COPA-207ENST00000545284 KCNH5Q8NCM2 988 aa10.72□□□□□ -0.69
COPA-207ENST00000545284 GPBP1L1Q9HC44 474 aaPredicted RBP10.72□□□□□ -0.69
COPA-207ENST00000545284 CCDC7Q96M83 1385 aa10.72□□□□□ -0.69
COPA-207ENST00000545284 LRRC37A3O60309 1634 aa10.71□□□□□ -0.69
COPA-207ENST00000545284 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.69
COPA-207ENST00000545284 SBF2Q86WG5 1849 aa10.71□□□□□ -0.69
COPA-207ENST00000545284 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
COPA-207ENST00000545284 ARHGEF25Q86VW2 580 aa10.7□□□□□ -0.7
COPA-207ENST00000545284 DCAF11Q8TEB1 546 aa10.7□□□□□ -0.7
COPA-207ENST00000545284 AKT1S1Q96B36 256 aa10.7□□□□□ -0.7
COPA-207ENST00000545284 AXIN2Q9Y2T1 843 aa10.7□□□□□ -0.7
COPA-207ENST00000545284 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
COPA-207ENST00000545284 SLIT3O75094 1523 aa10.68□□□□□ -0.7
COPA-207ENST00000545284 SHANK3Q9BYB0 1731 aa10.68□□□□□ -0.7
COPA-207ENST00000545284 CSB-PGBD3P0DP91 1061 aa10.68□□□□□ -0.7
COPA-207ENST00000545284 ZNF827Q17R98 1081 aa10.68□□□□□ -0.7
COPA-207ENST00000545284 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
COPA-207ENST00000545284 USP6P35125 1406 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 TNS2Q63HR2 1409 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 ATP10DQ9P241 1426 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 ZBTB7CA1YPR0 619 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 YBX3P16989 372 aaKnown RBP eCLIP10.67□□□□□ -0.78e-14■□□□□ 9.9
COPA-207ENST00000545284 APLP1P51693 650 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
COPA-207ENST00000545284 LRRC4BQ9NT99 713 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 TFCP2L1Q9NZI6 479 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 CD2APQ9Y5K6 639 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 CPSF1Q10570 1443 aaKnown RBP10.67□□□□□ -0.7
COPA-207ENST00000545284 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
COPA-207ENST00000545284 PNPLA7Q6ZV29 1317 aa10.66□□□□□ -0.7
COPA-207ENST00000545284 SRPK2P78362 688 aaKnown RBP10.66□□□□□ -0.7
COPA-207ENST00000545284 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
COPA-207ENST00000545284 GOLGB1Q14789 3259 aaKnown RBP10.66□□□□□ -0.7
COPA-207ENST00000545284 PAPPAQ13219 1627 aa10.66□□□□□ -0.7
COPA-207ENST00000545284 TOPAZ1Q8N9V7 1692 aa10.65□□□□□ -0.7
COPA-207ENST00000545284 ADCY9O60503 1353 aa10.65□□□□□ -0.71
COPA-207ENST00000545284 IL2RBP14784 551 aa10.64□□□□□ -0.71
COPA-207ENST00000545284 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
COPA-207ENST00000545284 CABP1Q9NZU7 370 aa10.64□□□□□ -0.71
COPA-207ENST00000545284 ABCC6O95255 1503 aa10.63□□□□□ -0.71
COPA-207ENST00000545284 TTC21AQ8NDW8 1320 aa10.63□□□□□ -0.71
COPA-207ENST00000545284 DNAJC5GQ8N7S2 189 aa10.63□□□□□ -0.71
COPA-207ENST00000545284 ARHGEF28Q8N1W1 1705 aaKnown RBP10.62□□□□□ -0.71
COPA-207ENST00000545284 NHSQ6T4R5 1651 aa10.62□□□□□ -0.71
COPA-207ENST00000545284 COL18A1P39060 1754 aa10.62□□□□□ -0.71
COPA-207ENST00000545284 TRPM1Q7Z4N2 1603 aa10.62□□□□□ -0.71
COPA-207ENST00000545284 COL24A1Q17RW2 1714 aa10.61□□□□□ -0.71
COPA-207ENST00000545284 CENPJQ9HC77 1338 aaPredicted RBP10.61□□□□□ -0.71
COPA-207ENST00000545284 TOMM70O94826 608 aa10.61□□□□□ -0.71
COPA-207ENST00000545284 FLAD1Q8NFF5 587 aa10.61□□□□□ -0.71
COPA-207ENST00000545284 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
COPA-207ENST00000545284 AKAP12Q02952 1782 aa10.61□□□□□ -0.71
COPA-207ENST00000545284 ERBB3P21860 1342 aa10.6□□□□□ -0.71
COPA-207ENST00000545284 TTC21BQ7Z4L5 1316 aa10.6□□□□□ -0.71
COPA-207ENST00000545284 KIF3CO14782 793 aa10.6□□□□□ -0.71
COPA-207ENST00000545284 NLRP2Q9NX02 1062 aa10.59□□□□□ -0.71
COPA-207ENST00000545284 PRELPP51888 382 aa10.58□□□□□ -0.72
COPA-207ENST00000545284 JMYQ8N9B5 988 aa10.58□□□□□ -0.72
COPA-207ENST00000545284 WNK3Q9BYP7 1800 aa10.58□□□□□ -0.72
COPA-207ENST00000545284 QSER1Q2KHR3 1735 aa10.58□□□□□ -0.72
COPA-207ENST00000545284 EVC2Q86UK5 1308 aa10.58□□□□□ -0.72
COPA-207ENST00000545284 COL23A1Q86Y22 540 aaPredicted RBP10.57□□□□□ -0.72
COPA-207ENST00000545284 ANKRD36BQ8N2N9 1353 aa10.56□□□□□ -0.72
COPA-207ENST00000545284 ZNF526Q8TF50 670 aaPredicted RBP10.56□□□□□ -0.72
COPA-207ENST00000545284 CCNL1Q9UK58 526 aaPredicted RBP10.56□□□□□ -0.72
COPA-207ENST00000545284 USP31Q70CQ4 1352 aa10.55□□□□□ -0.72
COPA-207ENST00000545284 MSH5O43196 834 aa10.55□□□□□ -0.72
COPA-207ENST00000545284 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
COPA-207ENST00000545284 NFAT5O94916 1531 aa10.54□□□□□ -0.72
COPA-207ENST00000545284 SOX12O15370 315 aa10.54□□□□□ -0.72
COPA-207ENST00000545284 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
COPA-207ENST00000545284 NBPF1Q3BBV0 1214 aa10.54□□□□□ -0.72
COPA-207ENST00000545284 COL13A1Q5TAT6 717 aaPredicted RBP10.54□□□□□ -0.72
COPA-207ENST00000545284 DDX54Q8TDD1 881 aaKnown RBP10.54□□□□□ -0.72
COPA-207ENST00000545284 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
COPA-207ENST00000545284 TNS4Q8IZW8 715 aa10.53□□□□□ -0.72
COPA-207ENST00000545284 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
COPA-207ENST00000545284 SYTL4Q96C24 671 aaPredicted RBP10.53□□□□□ -0.72
COPA-207ENST00000545284 BTAF1O14981 1849 aa10.53□□□□□ -0.72
COPA-207ENST00000545284 PIK3C2AO00443 1686 aa10.53□□□□□ -0.72
COPA-207ENST00000545284 USP47Q96K76 1375 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms