RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 CFAP58Q5T655 872 aa10.6□□□□□ -0.71
SCN8A-203ENST00000545061 NPM1P06748 294 aaKnown RBP eCLIP10.6□□□□□ -0.71
SCN8A-203ENST00000545061 KRT222Q8N1A0 295 aa10.6□□□□□ -0.71
SCN8A-203ENST00000545061 ERC2O15083 957 aa10.6□□□□□ -0.71
SCN8A-203ENST00000545061 CCDC38Q502W7 563 aa10.6□□□□□ -0.71
SCN8A-203ENST00000545061 CDK5RAP3Q96JB5 506 aa10.6□□□□□ -0.71
SCN8A-203ENST00000545061 RBBP5Q15291 538 aaKnown RBP10.6□□□□□ -0.71
SCN8A-203ENST00000545061 RASSF4Q9H2L5 321 aa10.6□□□□□ -0.71
SCN8A-203ENST00000545061 RILPL2Q969X0 211 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 WDR63Q8IWG1 891 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 POGKQ9P215 609 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 NINLQ9Y2I6 1382 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 MCM5P33992 734 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 MVPQ14764 893 aaKnown RBP10.59□□□□□ -0.71
SCN8A-203ENST00000545061 VCXQ9H320 206 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 DBN1Q16643 649 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 CACNA2D3Q8IZS8 1091 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 ZHX1Q9UKY1 873 aaPredicted RBP10.59□□□□□ -0.71
SCN8A-203ENST00000545061 SATB2Q9UPW6 733 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 MAP7Q14244 749 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 PTPN14Q15678 1187 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 GTF2F1P35269 517 aaKnown RBP eCLIP10.59□□□□□ -0.71
SCN8A-203ENST00000545061 RNF214Q8ND24 703 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 ANO2Q9NQ90 1003 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 NEBLO76041 1014 aa10.59□□□□□ -0.71
SCN8A-203ENST00000545061 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
SCN8A-203ENST00000545061 DIAPH1O60610 1272 aaKnown RBP10.58□□□□□ -0.72
SCN8A-203ENST00000545061 MORC1Q86VD1 984 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 CEP57Q86XR8 500 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 MYH10P35580 1976 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 MIER3Q7Z3K6 550 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 ATP11AP98196 1134 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 PUS7Q96PZ0 661 aaKnown RBP10.58□□□□□ -0.72
SCN8A-203ENST00000545061 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
SCN8A-203ENST00000545061 GSTTP1A0A1W2PQM5 241 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 VPS36Q86VN1 386 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 SPC24Q8NBT2 197 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 A0A1B0GUL7 405 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 SMTNL1A8MU46 457 aa10.58□□□□□ -0.72
SCN8A-203ENST00000545061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.58□□□□□ -0.72
SCN8A-203ENST00000545061 DNAJC8O75937 253 aaPredicted RBP10.58□□□□□ -0.72
SCN8A-203ENST00000545061 LMAN1P49257 510 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 GRPEL1Q9HAV7 217 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 TSNARE1Q96NA8 513 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 A6NNZ2 444 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 TUBB8Q3ZCM7 444 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 NFXL1Q6ZNB6 911 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 SPECC1Q5M775 1068 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 PAXBP1Q9Y5B6 917 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 KIF4AO95239 1232 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 TTC36A6NLP5 189 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 NEMFO60524 1076 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 KIF5AQ12840 1032 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 CWC22Q9HCG8 908 aaKnown RBP10.57□□□□□ -0.72
SCN8A-203ENST00000545061 CNGA1P29973 690 aa10.57□□□□□ -0.72
SCN8A-203ENST00000545061 MACROD2A1Z1Q3 448 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 FLIIQ13045 1269 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.72
SCN8A-203ENST00000545061 PRIMPOLQ96LW4 560 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 MTUS1Q9ULD2 1270 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
SCN8A-203ENST00000545061 PRDM10Q9NQV6 1147 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 IBSPP21815 317 aaPredicted RBP10.56□□□□□ -0.72
SCN8A-203ENST00000545061 SETDB1Q15047 1291 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 MAP7D1Q3KQU3 841 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 FBXW7Q969H0 707 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 HOMER2Q9NSB8 354 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 GBP1P32455 592 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 GIMAP4Q9NUV9 329 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 TSNAXIP1Q2TAA8 658 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 IFT74Q96LB3 600 aa10.56□□□□□ -0.72
SCN8A-203ENST00000545061 MYCBPQ99417 103 aaPredicted RBP10.56□□□□□ -0.72
SCN8A-203ENST00000545061 EBAG9O00559 213 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 PPP4R3BQ5MIZ7 849 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 CCDC121Q6ZUS5 278 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 IKBKGQ9Y6K9 419 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 USO1O60763 962 aaKnown RBP10.55□□□□□ -0.72
SCN8A-203ENST00000545061 LACTBP83111 547 aaPredicted RBP10.55□□□□□ -0.72
SCN8A-203ENST00000545061 SLU7O95391 586 aaKnown RBP10.55□□□□□ -0.72
SCN8A-203ENST00000545061 TPD52P55327 224 aaPredicted RBP10.55□□□□□ -0.72
SCN8A-203ENST00000545061 BICD1Q96G01 975 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 BRPF1P55201 1214 aaPredicted RBP10.55□□□□□ -0.72
SCN8A-203ENST00000545061 FERMT1Q9BQL6 677 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 EIF2AQ9BY44 585 aaKnown RBP10.55□□□□□ -0.72
SCN8A-203ENST00000545061 CHIC2Q9UKJ5 165 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 CEP104O60308 925 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 KIF20AO95235 890 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 B4GALNT4Q76KP1 1039 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
SCN8A-203ENST00000545061 RALYLQ86SE5 291 aaKnown RBP10.54□□□□□ -0.72
SCN8A-203ENST00000545061 STMN2Q93045 179 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 CAPZA3Q96KX2 299 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 SPA17Q15506 151 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 TAF7Q15545 349 aaPredicted RBP10.54□□□□□ -0.72
SCN8A-203ENST00000545061 TNMDQ9H2S6 317 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 ANKRD45Q5TZF3 282 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 OTUD6BQ8N6M0 293 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 HSF2BPO75031 334 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms