RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 HOXC9P31274 260 aa16.7■□□□□ 0.26
LMO3-231ENST00000544754 ZC3H6P61129 1189 aaKnown RBP16.7■□□□□ 0.26
LMO3-231ENST00000544754 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
LMO3-231ENST00000544754 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
LMO3-231ENST00000544754 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
LMO3-231ENST00000544754 CPDO75976 1380 aa16.69■□□□□ 0.26
LMO3-231ENST00000544754 ABCC6O95255 1503 aa16.69■□□□□ 0.26
LMO3-231ENST00000544754 IL13P35225 146 aa16.68■□□□□ 0.26
LMO3-231ENST00000544754 IP6K1Q92551 441 aa16.68■□□□□ 0.26
LMO3-231ENST00000544754 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
LMO3-231ENST00000544754 KIAA0232Q92628 1395 aa16.67■□□□□ 0.26
LMO3-231ENST00000544754 RGPD2P0DJD1 1756 aa16.67■□□□□ 0.26
LMO3-231ENST00000544754 LMO7Q8WWI1 1683 aa16.67■□□□□ 0.26
LMO3-231ENST00000544754 HAP1P54257 671 aaPredicted RBP16.67■□□□□ 0.26
LMO3-231ENST00000544754 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
LMO3-231ENST00000544754 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
LMO3-231ENST00000544754 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
LMO3-231ENST00000544754 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
LMO3-231ENST00000544754 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
LMO3-231ENST00000544754 JCADQ9P266 1359 aa16.64■□□□□ 0.26
LMO3-231ENST00000544754 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
LMO3-231ENST00000544754 HSPA1LP34931 641 aa16.64■□□□□ 0.25
LMO3-231ENST00000544754 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
LMO3-231ENST00000544754 CHRNA2Q15822 529 aa16.64■□□□□ 0.25
LMO3-231ENST00000544754 COL14A1Q05707 1796 aaKnown RBP16.64■□□□□ 0.25
LMO3-231ENST00000544754 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
LMO3-231ENST00000544754 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
LMO3-231ENST00000544754 AXIN2Q9Y2T1 843 aa16.63■□□□□ 0.25
LMO3-231ENST00000544754 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
LMO3-231ENST00000544754 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
LMO3-231ENST00000544754 PLCH1Q4KWH8 1693 aa16.61■□□□□ 0.25
LMO3-231ENST00000544754 CCDC146Q8IYE0 955 aa16.6■□□□□ 0.25
LMO3-231ENST00000544754 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
LMO3-231ENST00000544754 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
LMO3-231ENST00000544754 HMOX1P09601 288 aa16.59■□□□□ 0.25
LMO3-231ENST00000544754 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
LMO3-231ENST00000544754 EYA1Q99502 592 aa16.59■□□□□ 0.25
LMO3-231ENST00000544754 ERBB3P21860 1342 aa16.59■□□□□ 0.25
LMO3-231ENST00000544754 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
LMO3-231ENST00000544754 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
LMO3-231ENST00000544754 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
LMO3-231ENST00000544754 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
LMO3-231ENST00000544754 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
LMO3-231ENST00000544754 COL5A2P05997 1499 aaPredicted RBP16.57■□□□□ 0.24
LMO3-231ENST00000544754 FCHSD2O94868 740 aa16.57■□□□□ 0.24
LMO3-231ENST00000544754 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
LMO3-231ENST00000544754 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
LMO3-231ENST00000544754 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 KDRP35968 1356 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 SPATA31A6Q5VVP1 1343 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 SULT6B1Q6IMI4 303 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 NRAPQ86VF7 1730 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 LRP6O75581 1613 aa16.56■□□□□ 0.24
LMO3-231ENST00000544754 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
LMO3-231ENST00000544754 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
LMO3-231ENST00000544754 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
LMO3-231ENST00000544754 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
LMO3-231ENST00000544754 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
LMO3-231ENST00000544754 APAF1O14727 1248 aa16.53■□□□□ 0.24
LMO3-231ENST00000544754 WDR17Q8IZU2 1322 aa16.52■□□□□ 0.24
LMO3-231ENST00000544754 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
LMO3-231ENST00000544754 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.24
LMO3-231ENST00000544754 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.24
LMO3-231ENST00000544754 BTG4Q9NY30 223 aa16.52■□□□□ 0.24
LMO3-231ENST00000544754 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
LMO3-231ENST00000544754 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
LMO3-231ENST00000544754 SLIT2O94813 1529 aa16.5■□□□□ 0.23
LMO3-231ENST00000544754 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
LMO3-231ENST00000544754 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
LMO3-231ENST00000544754 STRN4Q9NRL3 753 aa16.5■□□□□ 0.23
LMO3-231ENST00000544754 NEFMP07197 916 aa16.49■□□□□ 0.23
LMO3-231ENST00000544754 EVA1CP58658 441 aa16.49■□□□□ 0.23
LMO3-231ENST00000544754 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
LMO3-231ENST00000544754 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
LMO3-231ENST00000544754 CRB1P82279 1406 aa16.48■□□□□ 0.23
LMO3-231ENST00000544754 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
LMO3-231ENST00000544754 LARP1Q6PKG0 1096 aaKnown RBP16.48■□□□□ 0.23
LMO3-231ENST00000544754 TOM1L2Q6ZVM7 507 aa16.48■□□□□ 0.23
LMO3-231ENST00000544754 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
LMO3-231ENST00000544754 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
LMO3-231ENST00000544754 WNK3Q9BYP7 1800 aa16.47■□□□□ 0.23
LMO3-231ENST00000544754 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
LMO3-231ENST00000544754 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
LMO3-231ENST00000544754 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
LMO3-231ENST00000544754 C8orf37Q96NL8 207 aa16.46■□□□□ 0.23
LMO3-231ENST00000544754 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.23
LMO3-231ENST00000544754 MEGF6O75095 1541 aa16.45■□□□□ 0.22
LMO3-231ENST00000544754 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
LMO3-231ENST00000544754 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
LMO3-231ENST00000544754 NGLY1Q96IV0 654 aa16.45■□□□□ 0.22
LMO3-231ENST00000544754 VIRMAQ69YN4 1812 aaKnown RBP16.44■□□□□ 0.22
LMO3-231ENST00000544754 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
LMO3-231ENST00000544754 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
LMO3-231ENST00000544754 RIPK4P57078 832 aa16.43■□□□□ 0.22
LMO3-231ENST00000544754 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms