RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 CRB1P82279 1406 aa15.06■□□□□ 0
CHEK1-218ENST00000544373 TOM1L2Q6ZVM7 507 aa15.06■□□□□ 0
CHEK1-218ENST00000544373 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
CHEK1-218ENST00000544373 THRAP3Q9Y2W1 955 aaKnown RBP15.06■□□□□ 0
CHEK1-218ENST00000544373 CLSPNQ9HAW4 1339 aa15.05■□□□□ 0
CHEK1-218ENST00000544373 NFAT5O94916 1531 aa15.05■□□□□ -0
CHEK1-218ENST00000544373 PDE3BQ13370 1112 aa15.05■□□□□ -0
CHEK1-218ENST00000544373 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
CHEK1-218ENST00000544373 EDC4Q6P2E9 1401 aaKnown RBP15.04■□□□□ -0
CHEK1-218ENST00000544373 TRIM37O94972 964 aa15.04■□□□□ -0
CHEK1-218ENST00000544373 EN1Q05925 392 aaPredicted RBP15.04■□□□□ -0
CHEK1-218ENST00000544373 MON2Q7Z3U7 1717 aa15.04■□□□□ -0
CHEK1-218ENST00000544373 COL18A1P39060 1754 aa15.04■□□□□ -0
CHEK1-218ENST00000544373 FAM196AQ6ZSG2 479 aa15.03■□□□□ -0
CHEK1-218ENST00000544373 TMF1P82094 1093 aa15.03■□□□□ -0
CHEK1-218ENST00000544373 SLC24A1O60721 1099 aa15.02□□□□□ -0.01
CHEK1-218ENST00000544373 CSB-PGBD3P0DP91 1061 aa15.02□□□□□ -0.01
CHEK1-218ENST00000544373 BAG6P46379 1132 aa15.02□□□□□ -0.01
CHEK1-218ENST00000544373 CCER1Q8TC90 406 aaPredicted RBP15.02□□□□□ -0.01
CHEK1-218ENST00000544373 FBLN1P23142 703 aa15.01□□□□□ -0.01
CHEK1-218ENST00000544373 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
CHEK1-218ENST00000544373 CARD10Q9BWT7 1032 aa15□□□□□ -0.01
CHEK1-218ENST00000544373 OVOS2A0A0J9YW53 1432 aa15□□□□□ -0.01
CHEK1-218ENST00000544373 OVOS2Q6IE36 1432 aa15□□□□□ -0.01
CHEK1-218ENST00000544373 EZH2Q15910 746 aaKnown RBP14.99□□□□□ -0.01
CHEK1-218ENST00000544373 DDB1Q16531 1140 aa14.99□□□□□ -0.01
CHEK1-218ENST00000544373 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
CHEK1-218ENST00000544373 APBA3O96018 575 aa14.98□□□□□ -0.01
CHEK1-218ENST00000544373 CAMKK2Q96RR4 588 aa14.98□□□□□ -0.01
CHEK1-218ENST00000544373 MARCH10Q8NA82 808 aaPredicted RBP14.97□□□□□ -0.01
CHEK1-218ENST00000544373 ERBB3P21860 1342 aa14.97□□□□□ -0.01
CHEK1-218ENST00000544373 PSDA5PKW4 1024 aaPredicted RBP14.97□□□□□ -0.01
CHEK1-218ENST00000544373 FYB1O15117 783 aa14.97□□□□□ -0.01
CHEK1-218ENST00000544373 PTF1AQ7RTS3 328 aa14.97□□□□□ -0.01
CHEK1-218ENST00000544373 ANKRD24Q8TF21 1146 aa14.97□□□□□ -0.01
CHEK1-218ENST00000544373 COG3Q96JB2 828 aa14.97□□□□□ -0.01
CHEK1-218ENST00000544373 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
CHEK1-218ENST00000544373 DISP2A7MBM2 1401 aa14.96□□□□□ -0.01
CHEK1-218ENST00000544373 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.01
CHEK1-218ENST00000544373 USP54Q70EL1 1684 aa14.95□□□□□ -0.02
CHEK1-218ENST00000544373 CARD14Q9BXL6 1004 aa14.95□□□□□ -0.02
CHEK1-218ENST00000544373 RGPD5Q99666 1765 aa14.95□□□□□ -0.02
CHEK1-218ENST00000544373 PARP4Q9UKK3 1724 aaKnown RBP14.94□□□□□ -0.02
CHEK1-218ENST00000544373 MAP3K19Q56UN5 1328 aa14.94□□□□□ -0.02
CHEK1-218ENST00000544373 CDCA8Q53HL2 280 aa14.94□□□□□ -0.02
CHEK1-218ENST00000544373 IP6K1Q92551 441 aa14.94□□□□□ -0.02
CHEK1-218ENST00000544373 CDCA7Q9BWT1 371 aaPredicted RBP14.94□□□□□ -0.02
CHEK1-218ENST00000544373 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
CHEK1-218ENST00000544373 LTV1Q96GA3 475 aaPredicted RBP14.93□□□□□ -0.02
CHEK1-218ENST00000544373 RGPD1P0DJD0 1748 aa14.93□□□□□ -0.02
CHEK1-218ENST00000544373 TNS1Q9HBL0 1735 aaKnown RBP14.93□□□□□ -0.02
CHEK1-218ENST00000544373 ABCC6O95255 1503 aa14.93□□□□□ -0.02
CHEK1-218ENST00000544373 OVOS2A0A0G2JMS6 1433 aa14.93□□□□□ -0.02
CHEK1-218ENST00000544373 EXOC5O00471 708 aa14.93□□□□□ -0.02
CHEK1-218ENST00000544373 LRRC37A3O60309 1634 aa14.93□□□□□ -0.02
CHEK1-218ENST00000544373 RRS1Q15050 365 aaKnown RBP14.92□□□□□ -0.02
CHEK1-218ENST00000544373 HOXC9P31274 260 aa14.91□□□□□ -0.02
CHEK1-218ENST00000544373 R3HDM1Q15032 1099 aaKnown RBP14.91□□□□□ -0.02
CHEK1-218ENST00000544373 HSPA5P11021 654 aaKnown RBP14.9□□□□□ -0.02
CHEK1-218ENST00000544373 PEAK1Q9H792 1746 aa14.9□□□□□ -0.02
CHEK1-218ENST00000544373 AMPHP49418 695 aa14.9□□□□□ -0.02
CHEK1-218ENST00000544373 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
CHEK1-218ENST00000544373 POLR3GLQ9BT43 218 aa14.9□□□□□ -0.02
CHEK1-218ENST00000544373 C11orf95C9JLR9 678 aaPredicted RBP14.89□□□□□ -0.03
CHEK1-218ENST00000544373 IL2RBP14784 551 aa14.89□□□□□ -0.03
CHEK1-218ENST00000544373 EIF4G2P78344 907 aaKnown RBP eCLIP14.89□□□□□ -0.03
CHEK1-218ENST00000544373 BCL11BQ9C0K0 894 aaPredicted RBP14.89□□□□□ -0.03
CHEK1-218ENST00000544373 LTN1O94822 1766 aa14.89□□□□□ -0.03
CHEK1-218ENST00000544373 NSD3Q9BZ95 1437 aa14.88□□□□□ -0.03
CHEK1-218ENST00000544373 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
CHEK1-218ENST00000544373 KCNQ2O43526 872 aa14.87□□□□□ -0.03
CHEK1-218ENST00000544373 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
CHEK1-218ENST00000544373 PARD3Q8TEW0 1356 aa14.87□□□□□ -0.03
CHEK1-218ENST00000544373 BCL9O00512 1426 aa14.87□□□□□ -0.03
CHEK1-218ENST00000544373 TNS2Q63HR2 1409 aa14.87□□□□□ -0.03
CHEK1-218ENST00000544373 HSP90AB2PQ58FF8 381 aa14.86□□□□□ -0.03
CHEK1-218ENST00000544373 PROM2Q8N271 834 aa14.86□□□□□ -0.03
CHEK1-218ENST00000544373 ACSBG1Q96GR2 724 aa14.86□□□□□ -0.03
CHEK1-218ENST00000544373 WNK3Q9BYP7 1800 aa14.86□□□□□ -0.03
CHEK1-218ENST00000544373 PLSCR1O15162 318 aa14.85□□□□□ -0.03
CHEK1-218ENST00000544373 MYOM1P52179 1685 aa14.85□□□□□ -0.03
CHEK1-218ENST00000544373 NBPF6Q5VWK0 638 aa14.84□□□□□ -0.03
CHEK1-218ENST00000544373 NBPF4Q96M43 638 aa14.84□□□□□ -0.03
CHEK1-218ENST00000544373 USHBP1Q8N6Y0 703 aa14.84□□□□□ -0.03
CHEK1-218ENST00000544373 EMILIN1Q9Y6C2 1016 aa14.84□□□□□ -0.03
CHEK1-218ENST00000544373 DDX54Q8TDD1 881 aaKnown RBP14.83□□□□□ -0.04
CHEK1-218ENST00000544373 RTL1A6NKG5 1358 aa14.82□□□□□ -0.04
CHEK1-218ENST00000544373 NBPF14Q5TI25 921 aa14.82□□□□□ -0.04
CHEK1-218ENST00000544373 PANK3Q9H999 370 aa14.81□□□□□ -0.04
CHEK1-218ENST00000544373 ANO8Q9HCE9 1232 aaPredicted RBP14.81□□□□□ -0.04
CHEK1-218ENST00000544373 SBF2Q86WG5 1849 aa14.81□□□□□ -0.04
CHEK1-218ENST00000544373 CGNL1Q0VF96 1302 aa14.8□□□□□ -0.04
CHEK1-218ENST00000544373 INSRP06213 1382 aa14.8□□□□□ -0.04
CHEK1-218ENST00000544373 RREB1Q92766 1687 aa14.8□□□□□ -0.04
CHEK1-218ENST00000544373 FLT4P35916 1363 aa14.79□□□□□ -0.04
CHEK1-218ENST00000544373 MEGF6O75095 1541 aa14.79□□□□□ -0.04
CHEK1-218ENST00000544373 PPM1GO15355 546 aaPredicted RBP14.79□□□□□ -0.04
CHEK1-218ENST00000544373 TNNT2P45379 298 aaPredicted RBP14.79□□□□□ -0.04
CHEK1-218ENST00000544373 TXNRD1Q16881 649 aa14.79□□□□□ -0.04
CHEK1-218ENST00000544373 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms