RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 PEAK1Q9H792 1746 aa13.87□□□□□ -0.19
C2CD3-220ENST00000544293 UTRNP46939 3433 aa13.86□□□□□ -0.19
C2CD3-220ENST00000544293 SRPK2P78362 688 aaKnown RBP13.86□□□□□ -0.19
C2CD3-220ENST00000544293 TXNRD1Q16881 649 aa13.86□□□□□ -0.19
C2CD3-220ENST00000544293 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
C2CD3-220ENST00000544293 SYT17Q9BSW7 474 aa13.86□□□□□ -0.19
C2CD3-220ENST00000544293 ARHGEF28Q8N1W1 1705 aaKnown RBP13.85□□□□□ -0.19
C2CD3-220ENST00000544293 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
C2CD3-220ENST00000544293 SLC15A2Q16348 729 aa13.85□□□□□ -0.19
C2CD3-220ENST00000544293 WDR17Q8IZU2 1322 aa13.85□□□□□ -0.19
C2CD3-220ENST00000544293 USP6P35125 1406 aa13.84□□□□□ -0.19
C2CD3-220ENST00000544293 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
C2CD3-220ENST00000544293 TOPAZ1Q8N9V7 1692 aa13.84□□□□□ -0.19
C2CD3-220ENST00000544293 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.19
C2CD3-220ENST00000544293 CARD10Q9BWT7 1032 aa13.83□□□□□ -0.2
C2CD3-220ENST00000544293 CENPJQ9HC77 1338 aaPredicted RBP13.83□□□□□ -0.2
C2CD3-220ENST00000544293 PARP4Q9UKK3 1724 aaKnown RBP13.82□□□□□ -0.2
C2CD3-220ENST00000544293 SLIT3O75094 1523 aa13.82□□□□□ -0.2
C2CD3-220ENST00000544293 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
C2CD3-220ENST00000544293 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
C2CD3-220ENST00000544293 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
C2CD3-220ENST00000544293 CDCA7Q9BWT1 371 aaPredicted RBP13.81□□□□□ -0.2
C2CD3-220ENST00000544293 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
C2CD3-220ENST00000544293 CASZ1Q86V15 1759 aa13.8□□□□□ -0.2
C2CD3-220ENST00000544293 COL18A1P39060 1754 aa13.79□□□□□ -0.2
C2CD3-220ENST00000544293 EXOC5O00471 708 aa13.79□□□□□ -0.2
C2CD3-220ENST00000544293 MTFR1LQ9H019 292 aa13.79□□□□□ -0.2
C2CD3-220ENST00000544293 STK32BQ9NY57 414 aa13.79□□□□□ -0.2
C2CD3-220ENST00000544293 LRRC4BQ9NT99 713 aa13.78□□□□□ -0.2
C2CD3-220ENST00000544293 CPSF1Q10570 1443 aaKnown RBP13.78□□□□□ -0.2
C2CD3-220ENST00000544293 LRRC37A3O60309 1634 aa13.78□□□□□ -0.2
C2CD3-220ENST00000544293 ITSN1Q15811 1721 aa13.78□□□□□ -0.2
C2CD3-220ENST00000544293 SOX12O15370 315 aa13.77□□□□□ -0.21
C2CD3-220ENST00000544293 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
C2CD3-220ENST00000544293 C1QTNF8P60827 252 aa13.76□□□□□ -0.21
C2CD3-220ENST00000544293 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
C2CD3-220ENST00000544293 CSB-PGBD3P0DP91 1061 aa13.75□□□□□ -0.21
C2CD3-220ENST00000544293 KCNH5Q8NCM2 988 aa13.75□□□□□ -0.21
C2CD3-220ENST00000544293 ARXQ96QS3 562 aa13.75□□□□□ -0.21
C2CD3-220ENST00000544293 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
C2CD3-220ENST00000544293 L3MBTL2Q969R5 705 aa13.74□□□□□ -0.21
C2CD3-220ENST00000544293 MYOM1P52179 1685 aa13.74□□□□□ -0.21
C2CD3-220ENST00000544293 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
C2CD3-220ENST00000544293 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
C2CD3-220ENST00000544293 RGPD3A6NKT7 1758 aaPredicted RBP13.73□□□□□ -0.21
C2CD3-220ENST00000544293 RGPD4Q7Z3J3 1758 aa13.73□□□□□ -0.21
C2CD3-220ENST00000544293 CCDC7Q96M83 1385 aa13.72□□□□□ -0.21
C2CD3-220ENST00000544293 MAP3K5Q99683 1374 aa13.72□□□□□ -0.21
C2CD3-220ENST00000544293 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
C2CD3-220ENST00000544293 PIK3C2AO00443 1686 aa13.72□□□□□ -0.21
C2CD3-220ENST00000544293 TTC21AQ8NDW8 1320 aa13.71□□□□□ -0.21
C2CD3-220ENST00000544293 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.21
C2CD3-220ENST00000544293 USP31Q70CQ4 1352 aa13.71□□□□□ -0.22
C2CD3-220ENST00000544293 NFAT5O94916 1531 aa13.7□□□□□ -0.22
C2CD3-220ENST00000544293 ERBB3P21860 1342 aa13.7□□□□□ -0.22
C2CD3-220ENST00000544293 TNS2Q63HR2 1409 aa13.7□□□□□ -0.22
C2CD3-220ENST00000544293 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
C2CD3-220ENST00000544293 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
C2CD3-220ENST00000544293 KCNQ4P56696 695 aa13.69□□□□□ -0.22
C2CD3-220ENST00000544293 NME9Q86XW9 330 aa13.69□□□□□ -0.22
C2CD3-220ENST00000544293 IL2RBP14784 551 aa13.68□□□□□ -0.22
C2CD3-220ENST00000544293 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
C2CD3-220ENST00000544293 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
C2CD3-220ENST00000544293 PNPLA7Q6ZV29 1317 aa13.67□□□□□ -0.22
C2CD3-220ENST00000544293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
C2CD3-220ENST00000544293 NLGN2Q8NFZ4 835 aa13.67□□□□□ -0.22
C2CD3-220ENST00000544293 PAPPAQ13219 1627 aa13.67□□□□□ -0.22
C2CD3-220ENST00000544293 SBNO2Q9Y2G9 1366 aa13.67□□□□□ -0.22
C2CD3-220ENST00000544293 TRPM1Q7Z4N2 1603 aa13.66□□□□□ -0.22
C2CD3-220ENST00000544293 GPR162Q16538 588 aa13.66□□□□□ -0.22
C2CD3-220ENST00000544293 ANKRD24Q8TF21 1146 aa13.66□□□□□ -0.22
C2CD3-220ENST00000544293 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
C2CD3-220ENST00000544293 CD163L1Q9NR16 1453 aa13.66□□□□□ -0.22
C2CD3-220ENST00000544293 SLC16A10Q8TF71 515 aa13.65□□□□□ -0.22
C2CD3-220ENST00000544293 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
C2CD3-220ENST00000544293 YBX3P16989 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
C2CD3-220ENST00000544293 FBLN1P23142 703 aa13.63□□□□□ -0.23
C2CD3-220ENST00000544293 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
C2CD3-220ENST00000544293 NSD2O96028 1365 aa13.62□□□□□ -0.23
C2CD3-220ENST00000544293 PRIM1P49642 420 aaKnown RBP13.62□□□□□ -0.23
C2CD3-220ENST00000544293 IFFO2Q5TF58 517 aa13.62□□□□□ -0.23
C2CD3-220ENST00000544293 DDX54Q8TDD1 881 aaKnown RBP13.62□□□□□ -0.23
C2CD3-220ENST00000544293 IP6K1Q92551 441 aa13.62□□□□□ -0.23
C2CD3-220ENST00000544293 ABCC6O95255 1503 aa13.62□□□□□ -0.23
C2CD3-220ENST00000544293 QRICH2Q9H0J4 1663 aa13.61□□□□□ -0.23
C2CD3-220ENST00000544293 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
C2CD3-220ENST00000544293 NHSQ6T4R5 1651 aa13.6□□□□□ -0.23
C2CD3-220ENST00000544293 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
C2CD3-220ENST00000544293 RGPD5Q99666 1765 aa13.6□□□□□ -0.23
C2CD3-220ENST00000544293 ROCK2O75116 1388 aaKnown RBP13.59□□□□□ -0.23
C2CD3-220ENST00000544293 GOLGB1Q14789 3259 aaKnown RBP13.59□□□□□ -0.23
C2CD3-220ENST00000544293 GIGYF1O75420 1035 aaPredicted RBP13.59□□□□□ -0.23
C2CD3-220ENST00000544293 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
C2CD3-220ENST00000544293 TFCP2L1Q9NZI6 479 aa13.59□□□□□ -0.23
C2CD3-220ENST00000544293 POLD1P28340 1107 aa13.58□□□□□ -0.24
C2CD3-220ENST00000544293 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
C2CD3-220ENST00000544293 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
C2CD3-220ENST00000544293 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
C2CD3-220ENST00000544293 ANKRD36BQ8N2N9 1353 aa13.57□□□□□ -0.24
C2CD3-220ENST00000544293 NEUROD1Q13562 356 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms