RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LTV1Q96GA3 475 aaPredicted RBP8.56□□□□□ -1.04
LTBR-212ENST00000543542 QTRT2Q9H974 415 aaKnown RBP8.56□□□□□ -1.04
LTBR-212ENST00000543542 TRPC5Q9UL62 973 aaPredicted RBP8.56□□□□□ -1.04
LTBR-212ENST00000543542 AATKQ6ZMQ8 1374 aa8.56□□□□□ -1.04
LTBR-212ENST00000543542 MAP3K19Q56UN5 1328 aa8.55□□□□□ -1.04
LTBR-212ENST00000543542 SLIT2O94813 1529 aa8.55□□□□□ -1.04
LTBR-212ENST00000543542 TOM1L2Q6ZVM7 507 aa8.55□□□□□ -1.04
LTBR-212ENST00000543542 USP35Q9P2H5 1018 aa8.55□□□□□ -1.04
LTBR-212ENST00000543542 SMG6Q86US8 1419 aaKnown RBP8.54□□□□□ -1.04
LTBR-212ENST00000543542 NRAPQ86VF7 1730 aa8.54□□□□□ -1.04
LTBR-212ENST00000543542 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.54□□□□□ -1.04
LTBR-212ENST00000543542 LMO7Q8WWI1 1683 aa8.54□□□□□ -1.04
LTBR-212ENST00000543542 CAMTA1Q9Y6Y1 1673 aa8.54□□□□□ -1.04
LTBR-212ENST00000543542 NPC1L1Q9UHC9 1359 aa8.54□□□□□ -1.04
LTBR-212ENST00000543542 HOXC9P31274 260 aa8.54□□□□□ -1.04
LTBR-212ENST00000543542 ANKRD24Q8TF21 1146 aa8.54□□□□□ -1.04
LTBR-212ENST00000543542 IP6K1Q92551 441 aa8.54□□□□□ -1.04
LTBR-212ENST00000543542 EMILIN1Q9Y6C2 1016 aa8.54□□□□□ -1.04
LTBR-212ENST00000543542 COL18A1P39060 1754 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 BCL9LQ86UU0 1499 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 RTL1A6NKG5 1358 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 FLT4P35916 1363 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 RXRBP28702 533 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 VPS72Q15906 364 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 LARP1Q6PKG0 1096 aaKnown RBP8.53□□□□□ -1.04
LTBR-212ENST00000543542 NLRP2Q9NX02 1062 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 ABCC6O95255 1503 aa8.53□□□□□ -1.04
LTBR-212ENST00000543542 BLMP54132 1417 aaPredicted RBP8.53□□□□□ -1.04
LTBR-212ENST00000543542 COL5A2P05997 1499 aaPredicted RBP8.52□□□□□ -1.05
LTBR-212ENST00000543542 RBM6P78332 1123 aaKnown RBP8.52□□□□□ -1.05
LTBR-212ENST00000543542 HSP90AB2PQ58FF8 381 aa8.52□□□□□ -1.05
LTBR-212ENST00000543542 POTEAQ6S8J7 498 aa8.52□□□□□ -1.05
LTBR-212ENST00000543542 GJD4Q96KN9 370 aaPredicted RBP8.52□□□□□ -1.05
LTBR-212ENST00000543542 CFAP53Q96M91 514 aa8.52□□□□□ -1.05
LTBR-212ENST00000543542 POLKQ9UBT6 870 aa8.52□□□□□ -1.05
LTBR-212ENST00000543542 RGS17Q9UGC6 210 aaPredicted RBP8.52□□□□□ -1.05
LTBR-212ENST00000543542 ATRNO75882 1429 aa8.52□□□□□ -1.05
LTBR-212ENST00000543542 WDR17Q8IZU2 1322 aa8.52□□□□□ -1.05
LTBR-212ENST00000543542 PEAK1Q9H792 1746 aa8.51□□□□□ -1.05
LTBR-212ENST00000543542 KIF24Q5T7B8 1368 aa8.51□□□□□ -1.05
LTBR-212ENST00000543542 FAM208AQ9UK61 1670 aaKnown RBP8.51□□□□□ -1.05
LTBR-212ENST00000543542 ANP32CO43423 234 aa8.51□□□□□ -1.05
LTBR-212ENST00000543542 MTHFSP49914 203 aa8.51□□□□□ -1.05
LTBR-212ENST00000543542 RALBP1Q15311 655 aa8.51□□□□□ -1.05
LTBR-212ENST00000543542 CRB1P82279 1406 aa8.51□□□□□ -1.05
LTBR-212ENST00000543542 ERBB3P21860 1342 aa8.51□□□□□ -1.05
LTBR-212ENST00000543542 INSRP06213 1382 aa8.5□□□□□ -1.05
LTBR-212ENST00000543542 PPP2R1AP30153 589 aa8.5□□□□□ -1.05
LTBR-212ENST00000543542 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
LTBR-212ENST00000543542 RGPD2P0DJD1 1756 aa8.5□□□□□ -1.05
LTBR-212ENST00000543542 SPATA31A1Q5TZJ5 1347 aa8.5□□□□□ -1.05
LTBR-212ENST00000543542 SPATA31A5Q5VU36 1347 aa8.5□□□□□ -1.05
LTBR-212ENST00000543542 SPATA31A7Q8IWB4 1347 aa8.5□□□□□ -1.05
LTBR-212ENST00000543542 TCP11L2Q8N4U5 519 aa8.49□□□□□ -1.05
LTBR-212ENST00000543542 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
LTBR-212ENST00000543542 CDK12Q9NYV4 1490 aaPredicted RBP8.49□□□□□ -1.05
LTBR-212ENST00000543542 PARD3Q8TEW0 1356 aa8.48□□□□□ -1.05
LTBR-212ENST00000543542 GLI3P10071 1580 aa8.48□□□□□ -1.05
LTBR-212ENST00000543542 U2SURPO15042 1029 aaKnown RBP8.48□□□□□ -1.05
LTBR-212ENST00000543542 DIAPH1O60610 1272 aaKnown RBP8.48□□□□□ -1.05
LTBR-212ENST00000543542 EIF4A2Q14240 407 aaKnown RBP8.48□□□□□ -1.05
LTBR-212ENST00000543542 USHBP1Q8N6Y0 703 aa8.48□□□□□ -1.05
LTBR-212ENST00000543542 THRAP3Q9Y2W1 955 aaKnown RBP8.48□□□□□ -1.05
LTBR-212ENST00000543542 MYBBP1AQ9BQG0 1328 aaKnown RBP8.48□□□□□ -1.05
LTBR-212ENST00000543542 NBPF6Q5VWK0 638 aa8.47□□□□□ -1.05
LTBR-212ENST00000543542 SEPT12Q8IYM1 358 aa8.47□□□□□ -1.05
LTBR-212ENST00000543542 RAPGEF4Q8WZA2 1011 aa8.47□□□□□ -1.05
LTBR-212ENST00000543542 NBPF4Q96M43 638 aa8.47□□□□□ -1.05
LTBR-212ENST00000543542 PRKRIP1Q9H875 184 aaPredicted RBP8.47□□□□□ -1.05
LTBR-212ENST00000543542 NUDCQ9Y266 331 aa8.47□□□□□ -1.05
LTBR-212ENST00000543542 WNK3Q9BYP7 1800 aa8.47□□□□□ -1.05
LTBR-212ENST00000543542 IL2RBP14784 551 aa8.46□□□□□ -1.06
LTBR-212ENST00000543542 TATP17735 454 aaPredicted RBP8.46□□□□□ -1.06
LTBR-212ENST00000543542 PDE3BQ13370 1112 aa8.46□□□□□ -1.06
LTBR-212ENST00000543542 BARGINQ6ZT62 677 aa8.46□□□□□ -1.06
LTBR-212ENST00000543542 CDCA7Q9BWT1 371 aaPredicted RBP8.46□□□□□ -1.06
LTBR-212ENST00000543542 EXOC5O00471 708 aa8.45□□□□□ -1.06
LTBR-212ENST00000543542 DDB1Q16531 1140 aa8.45□□□□□ -1.06
LTBR-212ENST00000543542 DIEXFQ68CQ4 756 aaKnown RBP8.45□□□□□ -1.06
LTBR-212ENST00000543542 EYA1Q99502 592 aa8.45□□□□□ -1.06
LTBR-212ENST00000543542 PARP4Q9UKK3 1724 aaKnown RBP8.45□□□□□ -1.06
LTBR-212ENST00000543542 BRWD3Q6RI45 1802 aa8.45□□□□□ -1.06
LTBR-212ENST00000543542 RGS12O14924 1447 aa8.45□□□□□ -1.06
LTBR-212ENST00000543542 HMOX1P09601 288 aa8.44□□□□□ -1.06
LTBR-212ENST00000543542 IL13P35225 146 aa8.44□□□□□ -1.06
LTBR-212ENST00000543542 SULT6B1Q6IMI4 303 aa8.44□□□□□ -1.06
LTBR-212ENST00000543542 KRT27Q7Z3Y8 459 aa8.44□□□□□ -1.06
LTBR-212ENST00000543542 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
LTBR-212ENST00000543542 NEFMP07197 916 aa8.43□□□□□ -1.06
LTBR-212ENST00000543542 U2AF1L5P0DN76 240 aaPredicted RBP8.43□□□□□ -1.06
LTBR-212ENST00000543542 U2AF1Q01081 240 aaKnown RBP eCLIP8.43□□□□□ -1.06
LTBR-212ENST00000543542 WDR43Q15061 677 aaKnown RBP eCLIP8.43□□□□□ -1.06
LTBR-212ENST00000543542 ILDR2Q71H61 639 aa8.43□□□□□ -1.06
LTBR-212ENST00000543542 DDX54Q8TDD1 881 aaKnown RBP8.43□□□□□ -1.06
LTBR-212ENST00000543542 LRRC37A3O60309 1634 aa8.43□□□□□ -1.06
LTBR-212ENST00000543542 THSD7AQ9UPZ6 1657 aa8.43□□□□□ -1.06
LTBR-212ENST00000543542 ZCRB1Q8TBF4 217 aaKnown RBP8.42□□□□□ -1.06
LTBR-212ENST00000543542 SPG7Q9UQ90 795 aa8.42□□□□□ -1.06
LTBR-212ENST00000543542 IGSF1Q8N6C5 1336 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms