RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ZNHIT6Q9NWK9 470 aaKnown RBP15.55■□□□□ 0.08
TNC-212ENST00000542877 ATF3P18847 181 aa15.55■□□□□ 0.08
TNC-212ENST00000542877 CCDC191Q8NCU4 936 aa15.55■□□□□ 0.08
TNC-212ENST00000542877 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.55■□□□□ 0.08
TNC-212ENST00000542877 ME1P48163 572 aa15.55■□□□□ 0.08
TNC-212ENST00000542877 HSP90AB2PQ58FF8 381 aa15.55■□□□□ 0.08
TNC-212ENST00000542877 SULT6B1Q6IMI4 303 aa15.55■□□□□ 0.08
TNC-212ENST00000542877 CBFA2T2O43439 604 aa15.55■□□□□ 0.08
TNC-212ENST00000542877 CCDC184Q52MB2 194 aa15.55■□□□□ 0.08
TNC-212ENST00000542877 PLEKHH2Q8IVE3 1493 aa15.55■□□□□ 0.08
TNC-212ENST00000542877 RDXP35241 583 aaKnown RBP15.54■□□□□ 0.08
TNC-212ENST00000542877 KDM4AO75164 1064 aa15.54■□□□□ 0.08
TNC-212ENST00000542877 TTC39AQ5SRH9 613 aa15.54■□□□□ 0.08
TNC-212ENST00000542877 PPFIBP1Q86W92 1011 aa15.54■□□□□ 0.08
TNC-212ENST00000542877 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
TNC-212ENST00000542877 CDK5RAP3Q96JB5 506 aa15.54■□□□□ 0.08
TNC-212ENST00000542877 UQCRHLA0A096LP55 91 aa15.54■□□□□ 0.08
TNC-212ENST00000542877 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
TNC-212ENST00000542877 UQCRHP07919 91 aa15.54■□□□□ 0.08
TNC-212ENST00000542877 BRPF1P55201 1214 aaPredicted RBP15.54■□□□□ 0.08
TNC-212ENST00000542877 CFAP45Q9UL16 551 aa15.54■□□□□ 0.08
TNC-212ENST00000542877 BLOC1S2Q6QNY1 142 aa15.53■□□□□ 0.08
TNC-212ENST00000542877 TRIM22Q8IYM9 498 aa15.53■□□□□ 0.08
TNC-212ENST00000542877 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
TNC-212ENST00000542877 KIF6Q6ZMV9 814 aa15.53■□□□□ 0.08
TNC-212ENST00000542877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.53■□□□□ 0.08
TNC-212ENST00000542877 STK3Q13188 491 aa15.53■□□□□ 0.08
TNC-212ENST00000542877 SPATA32Q96LK8 384 aa15.53■□□□□ 0.08
TNC-212ENST00000542877 PDRG1Q9NUG6 133 aa15.53■□□□□ 0.08
TNC-212ENST00000542877 AXDND1Q5T1B0 1012 aaPredicted RBP15.52■□□□□ 0.08
TNC-212ENST00000542877 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
TNC-212ENST00000542877 RRP9O43818 475 aaKnown RBP15.52■□□□□ 0.08
TNC-212ENST00000542877 NUP62CLQ9H1M0 184 aa15.52■□□□□ 0.08
TNC-212ENST00000542877 GRIN2BQ13224 1484 aa15.52■□□□□ 0.08
TNC-212ENST00000542877 ERLIN1O75477 346 aa15.52■□□□□ 0.07
TNC-212ENST00000542877 FCHSD2O94868 740 aa15.52■□□□□ 0.07
TNC-212ENST00000542877 CEP57L1Q8IYX8 460 aa15.52■□□□□ 0.07
TNC-212ENST00000542877 TIAM1Q13009 1591 aa15.52■□□□□ 0.07
TNC-212ENST00000542877 CCAR1Q8IX12 1150 aaKnown RBP15.51■□□□□ 0.07
TNC-212ENST00000542877 LUC7LQ9NQ29 371 aaKnown RBP15.51■□□□□ 0.07
TNC-212ENST00000542877 KRT32Q14532 448 aa15.51■□□□□ 0.07
TNC-212ENST00000542877 ZSCAN30Q86W11 494 aa15.51■□□□□ 0.07
TNC-212ENST00000542877 TXLNBQ8N3L3 684 aa15.51■□□□□ 0.07
TNC-212ENST00000542877 CABP1Q9NZU7 370 aa15.51■□□□□ 0.07
TNC-212ENST00000542877 NCAPD3P42695 1498 aa15.51■□□□□ 0.07
TNC-212ENST00000542877 STIM1Q13586 685 aa15.51■□□□□ 0.07
TNC-212ENST00000542877 NACAP1Q9BZK3 213 aa15.51■□□□□ 0.07
TNC-212ENST00000542877 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
TNC-212ENST00000542877 ZFYVE27Q5T4F4 411 aa15.5■□□□□ 0.07
TNC-212ENST00000542877 MTMR7Q9Y216 660 aa15.5■□□□□ 0.07
TNC-212ENST00000542877 EIF3JO75822 258 aaKnown RBP15.5■□□□□ 0.07
TNC-212ENST00000542877 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
TNC-212ENST00000542877 CDKL5O76039 1030 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 ZSCAN25Q6NSZ9 544 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 CNNM1Q9NRU3 951 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 GNL3LQ9NVN8 582 aaKnown RBP15.49■□□□□ 0.07
TNC-212ENST00000542877 JAKMIP1Q96N16 626 aaKnown RBP15.49■□□□□ 0.07
TNC-212ENST00000542877 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 ANKRD30BQ9BXX2 1392 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 ERLIN2O94905 339 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 TSPYL1Q9H0U9 437 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 RPGRIP1LQ68CZ1 1315 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 DAPK1P53355 1430 aa15.49■□□□□ 0.07
TNC-212ENST00000542877 TATP17735 454 aaPredicted RBP15.48■□□□□ 0.07
TNC-212ENST00000542877 TROQ12816 1431 aaPredicted RBP15.48■□□□□ 0.07
TNC-212ENST00000542877 SRGAP3O43295 1099 aa15.48■□□□□ 0.07
TNC-212ENST00000542877 CTNNA3Q9UI47 895 aa15.48■□□□□ 0.07
TNC-212ENST00000542877 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
TNC-212ENST00000542877 MAP4K4O95819 1239 aaPredicted RBP15.48■□□□□ 0.07
TNC-212ENST00000542877 AACSQ86V21 672 aa15.48■□□□□ 0.07
TNC-212ENST00000542877 TMEM57Q8N5G2 664 aa15.48■□□□□ 0.07
TNC-212ENST00000542877 CCDC69A6NI79 296 aa15.48■□□□□ 0.07
TNC-212ENST00000542877 SMTNL1A8MU46 457 aa15.47■□□□□ 0.07
TNC-212ENST00000542877 MPNDQ8N594 471 aa15.47■□□□□ 0.07
TNC-212ENST00000542877 SIL1Q9H173 461 aa15.47■□□□□ 0.07
TNC-212ENST00000542877 SLC52A1Q9NWF4 448 aa15.47■□□□□ 0.07
TNC-212ENST00000542877 GOLGA6L10A6NI86 522 aa15.47■□□□□ 0.07
TNC-212ENST00000542877 CALRP27797 417 aaKnown RBP15.47■□□□□ 0.07
TNC-212ENST00000542877 NFE2L2Q16236 605 aa15.47■□□□□ 0.07
TNC-212ENST00000542877 KRT18P05783 430 aaKnown RBP15.47■□□□□ 0.07
TNC-212ENST00000542877 UPF3BQ9BZI7 483 aaKnown RBP15.47■□□□□ 0.07
TNC-212ENST00000542877 NOL7Q9UMY1 257 aaKnown RBP15.47■□□□□ 0.07
TNC-212ENST00000542877 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
TNC-212ENST00000542877 IKQ13123 557 aaPredicted RBP15.47■□□□□ 0.07
TNC-212ENST00000542877 MAP3K11Q16584 847 aa15.47■□□□□ 0.07
TNC-212ENST00000542877 HECW1Q76N89 1606 aa15.46■□□□□ 0.07
TNC-212ENST00000542877 PDCL2Q8N4E4 241 aa15.46■□□□□ 0.07
TNC-212ENST00000542877 SYCP1Q15431 976 aa15.46■□□□□ 0.07
TNC-212ENST00000542877 CWC27Q6UX04 472 aaKnown RBP15.46■□□□□ 0.07
TNC-212ENST00000542877 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
TNC-212ENST00000542877 CCDC181Q5TID7 509 aa15.46■□□□□ 0.06
TNC-212ENST00000542877 ZNF530Q6P9A1 599 aaPredicted RBP15.46■□□□□ 0.06
TNC-212ENST00000542877 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.06
TNC-212ENST00000542877 DEF6Q9H4E7 631 aa15.46■□□□□ 0.06
TNC-212ENST00000542877 RTEL1-TNFRSF6BF6WH68 1400 aa15.45■□□□□ 0.06
TNC-212ENST00000542877 PKNOX2Q96KN3 472 aa15.45■□□□□ 0.06
TNC-212ENST00000542877 ESCO1Q5FWF5 840 aa15.45■□□□□ 0.06
TNC-212ENST00000542877 SYCE3A1L190 88 aa15.45■□□□□ 0.06
TNC-212ENST00000542877 KIF2AO00139 706 aaPredicted RBP15.45■□□□□ 0.06
TNC-212ENST00000542877 SUPT6HQ7KZ85 1726 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms