RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 NUTM2GQ5VZR2 741 aa11.91□□□□□ -0.5
CHMP4A-209ENST00000542700 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
CHMP4A-209ENST00000542700 SLC16A10Q8TF71 515 aa11.91□□□□□ -0.5
CHMP4A-209ENST00000542700 COL24A1Q17RW2 1714 aa11.91□□□□□ -0.5
CHMP4A-209ENST00000542700 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
CHMP4A-209ENST00000542700 ADGRF5Q8IZF2 1346 aa11.9□□□□□ -0.5
CHMP4A-209ENST00000542700 BCL9O00512 1426 aa11.9□□□□□ -0.5
CHMP4A-209ENST00000542700 YTHDC2Q9H6S0 1430 aaKnown RBP11.9□□□□□ -0.5
CHMP4A-209ENST00000542700 COL5A2P05997 1499 aaPredicted RBP11.89□□□□□ -0.51
CHMP4A-209ENST00000542700 CRB1P82279 1406 aa11.89□□□□□ -0.51
CHMP4A-209ENST00000542700 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
CHMP4A-209ENST00000542700 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
CHMP4A-209ENST00000542700 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
CHMP4A-209ENST00000542700 NMRK2Q9NPI5 230 aa11.87□□□□□ -0.51
CHMP4A-209ENST00000542700 RBM46Q8TBY0 533 aaKnown RBP11.86□□□□□ -0.51
CHMP4A-209ENST00000542700 PRR36Q9H6K5 1346 aa11.86□□□□□ -0.51
CHMP4A-209ENST00000542700 PCNTO95613 3336 aa11.85□□□□□ -0.51
CHMP4A-209ENST00000542700 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
CHMP4A-209ENST00000542700 PRAM1Q96QH2 718 aa11.85□□□□□ -0.51
CHMP4A-209ENST00000542700 LRRC4BQ9NT99 713 aa11.85□□□□□ -0.51
CHMP4A-209ENST00000542700 CPDO75976 1380 aa11.84□□□□□ -0.51
CHMP4A-209ENST00000542700 ROCK1Q13464 1354 aa11.84□□□□□ -0.51
CHMP4A-209ENST00000542700 ANKRD30BQ9BXX2 1392 aa11.84□□□□□ -0.51
CHMP4A-209ENST00000542700 QSER1Q2KHR3 1735 aa11.84□□□□□ -0.51
CHMP4A-209ENST00000542700 C16orf71Q8IYS4 520 aaPredicted RBP11.84□□□□□ -0.51
CHMP4A-209ENST00000542700 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
CHMP4A-209ENST00000542700 NHSQ6T4R5 1651 aa11.84□□□□□ -0.51
CHMP4A-209ENST00000542700 WNK3Q9BYP7 1800 aa11.83□□□□□ -0.51
CHMP4A-209ENST00000542700 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
CHMP4A-209ENST00000542700 TFCP2L1Q9NZI6 479 aa11.83□□□□□ -0.52
CHMP4A-209ENST00000542700 BRD4O60885 1362 aaPredicted RBP11.82□□□□□ -0.52
CHMP4A-209ENST00000542700 TUBGCP6Q96RT7 1819 aa11.82□□□□□ -0.52
CHMP4A-209ENST00000542700 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
CHMP4A-209ENST00000542700 FSTL1Q12841 308 aa11.82□□□□□ -0.52
CHMP4A-209ENST00000542700 MSL1Q68DK7 614 aa11.82□□□□□ -0.52
CHMP4A-209ENST00000542700 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
CHMP4A-209ENST00000542700 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
CHMP4A-209ENST00000542700 CD2APQ9Y5K6 639 aa11.81□□□□□ -0.52
CHMP4A-209ENST00000542700 PIK3C2GO75747 1445 aa11.8□□□□□ -0.52
CHMP4A-209ENST00000542700 MSH5O43196 834 aa11.8□□□□□ -0.52
CHMP4A-209ENST00000542700 MLLT1Q03111 559 aaPredicted RBP11.8□□□□□ -0.52
CHMP4A-209ENST00000542700 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-209ENST00000542700 POGKQ9P215 609 aa11.79□□□□□ -0.52
CHMP4A-209ENST00000542700 IGSF1Q8N6C5 1336 aa11.79□□□□□ -0.52
CHMP4A-209ENST00000542700 BTAF1O14981 1849 aa11.79□□□□□ -0.52
CHMP4A-209ENST00000542700 APLP2Q06481 763 aa11.78□□□□□ -0.52
CHMP4A-209ENST00000542700 CDCA7Q9BWT1 371 aaPredicted RBP11.78□□□□□ -0.52
CHMP4A-209ENST00000542700 USP19O94966 1318 aa11.78□□□□□ -0.52
CHMP4A-209ENST00000542700 USP6P35125 1406 aa11.77□□□□□ -0.52
CHMP4A-209ENST00000542700 KCNQ4P56696 695 aa11.77□□□□□ -0.53
CHMP4A-209ENST00000542700 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-209ENST00000542700 MINK1Q8N4C8 1332 aaPredicted RBP11.77□□□□□ -0.53
CHMP4A-209ENST00000542700 KIAA1210Q9ULL0 1709 aa11.77□□□□□ -0.53
CHMP4A-209ENST00000542700 EXOC5O00471 708 aa11.76□□□□□ -0.53
CHMP4A-209ENST00000542700 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
CHMP4A-209ENST00000542700 GCP02774 474 aa11.75□□□□□ -0.53
CHMP4A-209ENST00000542700 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
CHMP4A-209ENST00000542700 ABHD8Q96I13 439 aa11.75□□□□□ -0.53
CHMP4A-209ENST00000542700 FOXN1O15353 648 aa11.74□□□□□ -0.53
CHMP4A-209ENST00000542700 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
CHMP4A-209ENST00000542700 WDR17Q8IZU2 1322 aa11.74□□□□□ -0.53
CHMP4A-209ENST00000542700 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
CHMP4A-209ENST00000542700 ITGAEP38570 1179 aa11.73□□□□□ -0.53
CHMP4A-209ENST00000542700 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
CHMP4A-209ENST00000542700 WASLO00401 505 aaPredicted RBP11.72□□□□□ -0.53
CHMP4A-209ENST00000542700 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
CHMP4A-209ENST00000542700 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
CHMP4A-209ENST00000542700 ITSN1Q15811 1721 aa11.72□□□□□ -0.53
CHMP4A-209ENST00000542700 CFAP70Q5T0N1 1121 aa11.71□□□□□ -0.53
CHMP4A-209ENST00000542700 PIK3C2AO00443 1686 aa11.71□□□□□ -0.54
CHMP4A-209ENST00000542700 ABCC6O95255 1503 aa11.7□□□□□ -0.54
CHMP4A-209ENST00000542700 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
CHMP4A-209ENST00000542700 CSB-PGBD3P0DP91 1061 aa11.7□□□□□ -0.54
CHMP4A-209ENST00000542700 NLRP13Q86W25 1043 aa11.7□□□□□ -0.54
CHMP4A-209ENST00000542700 C14orf93Q9H972 538 aaKnown RBP11.7□□□□□ -0.54
CHMP4A-209ENST00000542700 CARD10Q9BWT7 1032 aa11.69□□□□□ -0.54
CHMP4A-209ENST00000542700 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
CHMP4A-209ENST00000542700 ACEP12821 1306 aa11.68□□□□□ -0.54
CHMP4A-209ENST00000542700 CCDC85CA6NKD9 419 aa11.68□□□□□ -0.54
CHMP4A-209ENST00000542700 NUDT16Q96DE0 195 aaKnown RBP11.68□□□□□ -0.54
CHMP4A-209ENST00000542700 RRAGCQ9HB90 399 aa11.68□□□□□ -0.54
CHMP4A-209ENST00000542700 PPIP5K1Q6PFW1 1433 aa11.68□□□□□ -0.54
CHMP4A-209ENST00000542700 SPATA31E1Q6ZUB1 1445 aa11.68□□□□□ -0.54
CHMP4A-209ENST00000542700 C10orf71Q711Q0 1435 aa11.68□□□□□ -0.54
CHMP4A-209ENST00000542700 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
CHMP4A-209ENST00000542700 KDM2BQ8NHM5 1336 aa11.67□□□□□ -0.54
CHMP4A-209ENST00000542700 RGS19P49795 217 aa11.67□□□□□ -0.54
CHMP4A-209ENST00000542700 TRAK1Q9UPV9 953 aa11.67□□□□□ -0.54
CHMP4A-209ENST00000542700 COL18A1P39060 1754 aa11.67□□□□□ -0.54
CHMP4A-209ENST00000542700 PLEKHG2Q9H7P9 1386 aa11.67□□□□□ -0.54
CHMP4A-209ENST00000542700 CTCFP49711 727 aaPredicted RBP11.66□□□□□ -0.54
CHMP4A-209ENST00000542700 ARHGAP27Q6ZUM4 889 aa11.66□□□□□ -0.54
CHMP4A-209ENST00000542700 MKRN1Q9UHC7 482 aaKnown RBP11.66□□□□□ -0.54
CHMP4A-209ENST00000542700 KAT6BQ8WYB5 2073 aa11.65□□□□□ -0.54
CHMP4A-209ENST00000542700 C9orf131Q5VYM1 1079 aa11.65□□□□□ -0.54
CHMP4A-209ENST00000542700 AIDAQ96BJ3 306 aa11.65□□□□□ -0.54
CHMP4A-209ENST00000542700 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
CHMP4A-209ENST00000542700 CCDC7Q96M83 1385 aa11.65□□□□□ -0.55
CHMP4A-209ENST00000542700 TNRC6CQ9HCJ0 1690 aaKnown RBP11.65□□□□□ -0.55
CHMP4A-209ENST00000542700 PXDNLA1KZ92 1463 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms