RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MIER1Q8N108 512 aa31.07■■■□□ 2.56
HOMER3-205ENST00000542541 CDK12Q9NYV4 1490 aaPredicted RBP31.06■■■□□ 2.56
HOMER3-205ENST00000542541 ABCC6O95255 1503 aa31.05■■■□□ 2.56
HOMER3-205ENST00000542541 HSP90AB2PQ58FF8 381 aa31.05■■■□□ 2.56
HOMER3-205ENST00000542541 INSRP06213 1382 aa31.04■■■□□ 2.56
HOMER3-205ENST00000542541 BLMP54132 1417 aaPredicted RBP31.04■■■□□ 2.56
HOMER3-205ENST00000542541 LTN1O94822 1766 aa31.04■■■□□ 2.56
HOMER3-205ENST00000542541 NGLY1Q96IV0 654 aa31.03■■■□□ 2.56
HOMER3-205ENST00000542541 AXIN2Q9Y2T1 843 aa31.03■■■□□ 2.56
HOMER3-205ENST00000542541 C8orf37Q96NL8 207 aa31.02■■■□□ 2.56
HOMER3-205ENST00000542541 CCER2I3L3R5 266 aa31.01■■■□□ 2.55
HOMER3-205ENST00000542541 COL14A1Q05707 1796 aaKnown RBP31■■■□□ 2.55
HOMER3-205ENST00000542541 BTG4Q9NY30 223 aa31■■■□□ 2.55
HOMER3-205ENST00000542541 PEAK1Q9H792 1746 aa31■■■□□ 2.55
HOMER3-205ENST00000542541 DIAPH1O60610 1272 aaKnown RBP30.99■■■□□ 2.55
HOMER3-205ENST00000542541 EVA1CP58658 441 aa30.98■■■□□ 2.55
HOMER3-205ENST00000542541 MRS2Q9HD23 443 aa30.98■■■□□ 2.55
HOMER3-205ENST00000542541 COL18A1P39060 1754 aa30.97■■■□□ 2.55
HOMER3-205ENST00000542541 ANKRD24Q8TF21 1146 aa30.97■■■□□ 2.55
HOMER3-205ENST00000542541 FNBP4Q8N3X1 1017 aaPredicted RBP30.96■■■□□ 2.55
HOMER3-205ENST00000542541 LTV1Q96GA3 475 aaPredicted RBP30.96■■■□□ 2.55
HOMER3-205ENST00000542541 NUDCQ9Y266 331 aa30.96■■■□□ 2.55
HOMER3-205ENST00000542541 CAMTA1Q9Y6Y1 1673 aa30.96■■■□□ 2.55
HOMER3-205ENST00000542541 PLCH1Q4KWH8 1693 aa30.95■■■□□ 2.55
HOMER3-205ENST00000542541 LMO7Q8WWI1 1683 aa30.95■■■□□ 2.55
HOMER3-205ENST00000542541 ERBB3P21860 1342 aa30.95■■■□□ 2.54
HOMER3-205ENST00000542541 EIF4A2Q14240 407 aaKnown RBP30.95■■■□□ 2.54
HOMER3-205ENST00000542541 CSB-PGBD3P0DP91 1061 aa30.94■■■□□ 2.54
HOMER3-205ENST00000542541 SLIT2O94813 1529 aa30.93■■■□□ 2.54
HOMER3-205ENST00000542541 IL13P35225 146 aa30.93■■■□□ 2.54
HOMER3-205ENST00000542541 STRN4Q9NRL3 753 aa30.92■■■□□ 2.54
HOMER3-205ENST00000542541 CCDC184Q52MB2 194 aa30.91■■■□□ 2.54
HOMER3-205ENST00000542541 COL5A2P05997 1499 aaPredicted RBP30.91■■■□□ 2.54
HOMER3-205ENST00000542541 COL3A1P02461 1466 aaPredicted RBP30.91■■■□□ 2.54
HOMER3-205ENST00000542541 UNC5CLQ8IV45 518 aa30.91■■■□□ 2.54
HOMER3-205ENST00000542541 WDR17Q8IZU2 1322 aa30.9■■■□□ 2.54
HOMER3-205ENST00000542541 USP21Q9UK80 565 aa30.89■■■□□ 2.54
HOMER3-205ENST00000542541 AFF2P51816 1311 aa30.88■■■□□ 2.53
HOMER3-205ENST00000542541 NWD2Q9ULI1 1742 aa30.88■■■□□ 2.53
HOMER3-205ENST00000542541 U2SURPO15042 1029 aaKnown RBP30.87■■■□□ 2.53
HOMER3-205ENST00000542541 TOM1L2Q6ZVM7 507 aa30.87■■■□□ 2.53
HOMER3-205ENST00000542541 NLRP2Q9NX02 1062 aa30.87■■■□□ 2.53
HOMER3-205ENST00000542541 NRAPQ86VF7 1730 aa30.86■■■□□ 2.53
HOMER3-205ENST00000542541 WDR43Q15061 677 aaKnown RBP eCLIP30.86■■■□□ 2.53
HOMER3-205ENST00000542541 LARP1Q6PKG0 1096 aaKnown RBP30.85■■■□□ 2.53
HOMER3-205ENST00000542541 BCL9LQ86UU0 1499 aa30.85■■■□□ 2.53
HOMER3-205ENST00000542541 RGPD5Q99666 1765 aa30.85■■■□□ 2.53
HOMER3-205ENST00000542541 EYA1Q99502 592 aa30.84■■■□□ 2.53
HOMER3-205ENST00000542541 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.84■■■□□ 2.53
HOMER3-205ENST00000542541 U2AF1L5P0DN76 240 aaPredicted RBP30.83■■■□□ 2.53
HOMER3-205ENST00000542541 U2AF1Q01081 240 aaKnown RBP eCLIP30.83■■■□□ 2.53
HOMER3-205ENST00000542541 NBPF6Q5VWK0 638 aa30.83■■■□□ 2.53
HOMER3-205ENST00000542541 PNISRQ8TF01 805 aaKnown RBP30.83■■■□□ 2.53
HOMER3-205ENST00000542541 NBPF4Q96M43 638 aa30.83■■■□□ 2.53
HOMER3-205ENST00000542541 CARD10Q9BWT7 1032 aa30.82■■■□□ 2.52
HOMER3-205ENST00000542541 CRB1P82279 1406 aa30.82■■■□□ 2.52
HOMER3-205ENST00000542541 IGSF1Q8N6C5 1336 aa30.81■■■□□ 2.52
HOMER3-205ENST00000542541 RGS17Q9UGC6 210 aaPredicted RBP30.81■■■□□ 2.52
HOMER3-205ENST00000542541 VPS72Q15906 364 aa30.8■■■□□ 2.52
HOMER3-205ENST00000542541 ZNF772Q68DY9 489 aaPredicted RBP30.8■■■□□ 2.52
HOMER3-205ENST00000542541 CCDC9Q9Y3X0 531 aaKnown RBP30.79■■■□□ 2.52
HOMER3-205ENST00000542541 TRPC5Q9UL62 973 aaPredicted RBP30.78■■■□□ 2.52
HOMER3-205ENST00000542541 FAM208AQ9UK61 1670 aaKnown RBP30.78■■■□□ 2.52
HOMER3-205ENST00000542541 SULT6B1Q6IMI4 303 aa30.77■■■□□ 2.52
HOMER3-205ENST00000542541 FCHSD2O94868 740 aa30.76■■■□□ 2.51
HOMER3-205ENST00000542541 PNNQ9H307 717 aaKnown RBP30.76■■■□□ 2.51
HOMER3-205ENST00000542541 SPATA31A5Q5VU36 1347 aa30.75■■■□□ 2.51
HOMER3-205ENST00000542541 SPATA31A7Q8IWB4 1347 aa30.75■■■□□ 2.51
HOMER3-205ENST00000542541 USP35Q9P2H5 1018 aa30.75■■■□□ 2.51
HOMER3-205ENST00000542541 ADAMTS8Q9UP79 889 aa30.75■■■□□ 2.51
HOMER3-205ENST00000542541 USHBP1Q8N6Y0 703 aa30.74■■■□□ 2.51
HOMER3-205ENST00000542541 PHF23Q9BUL5 403 aaPredicted RBP30.74■■■□□ 2.51
HOMER3-205ENST00000542541 THRAP3Q9Y2W1 955 aaKnown RBP30.74■■■□□ 2.51
HOMER3-205ENST00000542541 SPATA31A1Q5TZJ5 1347 aa30.74■■■□□ 2.51
HOMER3-205ENST00000542541 HMOX1P09601 288 aa30.73■■■□□ 2.51
HOMER3-205ENST00000542541 FAM9BQ8IZU0 186 aa30.73■■■□□ 2.51
HOMER3-205ENST00000542541 TCP11L2Q8N4U5 519 aa30.73■■■□□ 2.51
HOMER3-205ENST00000542541 QTRT2Q9H974 415 aaKnown RBP30.73■■■□□ 2.51
HOMER3-205ENST00000542541 KDRP35968 1356 aa30.72■■■□□ 2.51
HOMER3-205ENST00000542541 NCAPD2Q15021 1401 aa30.71■■■□□ 2.51
HOMER3-205ENST00000542541 RGPD1P0DJD0 1748 aa30.71■■■□□ 2.51
HOMER3-205ENST00000542541 AEBP1Q8IUX7 1158 aa30.71■■■□□ 2.51
HOMER3-205ENST00000542541 RAPGEF4Q8WZA2 1011 aa30.7■■■□□ 2.51
HOMER3-205ENST00000542541 ATRNO75882 1429 aa30.7■■■□□ 2.51
HOMER3-205ENST00000542541 GJD4Q96KN9 370 aaPredicted RBP30.69■■■□□ 2.5
HOMER3-205ENST00000542541 RSPH6AQ9H0K4 717 aa30.69■■■□□ 2.5
HOMER3-205ENST00000542541 NEFMP07197 916 aa30.68■■■□□ 2.5
HOMER3-205ENST00000542541 CDCA7Q9BWT1 371 aaPredicted RBP30.67■■■□□ 2.5
HOMER3-205ENST00000542541 IL2RBP14784 551 aa30.66■■■□□ 2.5
HOMER3-205ENST00000542541 PRKAR2BP31323 418 aa30.66■■■□□ 2.5
HOMER3-205ENST00000542541 BARGINQ6ZT62 677 aa30.66■■■□□ 2.5
HOMER3-205ENST00000542541 RGPD2P0DJD1 1756 aa30.66■■■□□ 2.5
HOMER3-205ENST00000542541 TATP17735 454 aaPredicted RBP30.65■■■□□ 2.5
HOMER3-205ENST00000542541 POTEAQ6S8J7 498 aa30.65■■■□□ 2.5
HOMER3-205ENST00000542541 GLI3P10071 1580 aa30.63■■■□□ 2.49
HOMER3-205ENST00000542541 PLEKHG2Q9H7P9 1386 aa30.62■■■□□ 2.49
HOMER3-205ENST00000542541 RUNDC1Q96C34 613 aa30.62■■■□□ 2.49
HOMER3-205ENST00000542541 MAPK8IP3Q9UPT6 1336 aa30.61■■■□□ 2.49
HOMER3-205ENST00000542541 PLEKHF1Q96S99 279 aa30.61■■■□□ 2.49
HOMER3-205ENST00000542541 RBM6P78332 1123 aaKnown RBP30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms