RNA–Protein interactions for RNA: ENST00000541951.5

PAAF1-210, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 2 BASIC

Gene PAAF1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-210ENST00000541951 IP6K1Q92551 441 aa15.36■□□□□ 0.05
PAAF1-210ENST00000541951 KIAA0232Q92628 1395 aa15.35■□□□□ 0.05
PAAF1-210ENST00000541951 ZC3H6P61129 1189 aaKnown RBP15.35■□□□□ 0.05
PAAF1-210ENST00000541951 PNNQ9H307 717 aaKnown RBP15.35■□□□□ 0.05
PAAF1-210ENST00000541951 PRDM11Q9NQV5 511 aa15.35■□□□□ 0.05
PAAF1-210ENST00000541951 U2SURPO15042 1029 aaKnown RBP15.34■□□□□ 0.05
PAAF1-210ENST00000541951 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
PAAF1-210ENST00000541951 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
PAAF1-210ENST00000541951 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
PAAF1-210ENST00000541951 IL13P35225 146 aa15.33■□□□□ 0.04
PAAF1-210ENST00000541951 NEFMP07197 916 aa15.32■□□□□ 0.04
PAAF1-210ENST00000541951 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
PAAF1-210ENST00000541951 ADAMTS8Q9UP79 889 aa15.32■□□□□ 0.04
PAAF1-210ENST00000541951 FAM208AQ9UK61 1670 aaKnown RBP15.32■□□□□ 0.04
PAAF1-210ENST00000541951 SPATA31A6Q5VVP1 1343 aa15.31■□□□□ 0.04
PAAF1-210ENST00000541951 COL14A1Q05707 1796 aaKnown RBP15.31■□□□□ 0.04
PAAF1-210ENST00000541951 HSPA1LP34931 641 aa15.3■□□□□ 0.04
PAAF1-210ENST00000541951 COL18A1P39060 1754 aa15.29■□□□□ 0.04
PAAF1-210ENST00000541951 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
PAAF1-210ENST00000541951 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
PAAF1-210ENST00000541951 LMO7Q8WWI1 1683 aa15.29■□□□□ 0.04
PAAF1-210ENST00000541951 ERBB3P21860 1342 aa15.28■□□□□ 0.04
PAAF1-210ENST00000541951 FCHSD2O94868 740 aa15.28■□□□□ 0.04
PAAF1-210ENST00000541951 ANKRD24Q8TF21 1146 aa15.28■□□□□ 0.04
PAAF1-210ENST00000541951 LTV1Q96GA3 475 aaPredicted RBP15.28■□□□□ 0.04
PAAF1-210ENST00000541951 IGSF1Q8N6C5 1336 aa15.28■□□□□ 0.04
PAAF1-210ENST00000541951 MAPK8IP3Q9UPT6 1336 aa15.28■□□□□ 0.04
PAAF1-210ENST00000541951 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.04
PAAF1-210ENST00000541951 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
PAAF1-210ENST00000541951 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
PAAF1-210ENST00000541951 RUNDC1Q96C34 613 aa15.26■□□□□ 0.03
PAAF1-210ENST00000541951 RGPD5Q99666 1765 aa15.26■□□□□ 0.03
PAAF1-210ENST00000541951 NUTM2BA6NNL0 878 aaPredicted RBP15.25■□□□□ 0.03
PAAF1-210ENST00000541951 NUTM2EB1AL46 878 aaPredicted RBP15.25■□□□□ 0.03
PAAF1-210ENST00000541951 NUTM2AQ8IVF1 878 aaPredicted RBP15.25■□□□□ 0.03
PAAF1-210ENST00000541951 NGEFQ8N5V2 710 aa15.25■□□□□ 0.03
PAAF1-210ENST00000541951 AXIN2Q9Y2T1 843 aa15.25■□□□□ 0.03
PAAF1-210ENST00000541951 COL5A2P05997 1499 aaPredicted RBP15.25■□□□□ 0.03
PAAF1-210ENST00000541951 CAMTA1Q9Y6Y1 1673 aa15.25■□□□□ 0.03
PAAF1-210ENST00000541951 KDRP35968 1356 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 SULT6B1Q6IMI4 303 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 EYA1Q99502 592 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 RSPH6AQ9H0K4 717 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 FAM83GA6ND36 823 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 ADAMTS2O95450 1211 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 HMOX1P09601 288 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 CCDC146Q8IYE0 955 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 FBXO41Q8TF61 875 aa15.24■□□□□ 0.03
PAAF1-210ENST00000541951 PLCH1Q4KWH8 1693 aa15.23■□□□□ 0.03
PAAF1-210ENST00000541951 WDR17Q8IZU2 1322 aa15.23■□□□□ 0.03
PAAF1-210ENST00000541951 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
PAAF1-210ENST00000541951 PRKAR2BP31323 418 aa15.23■□□□□ 0.03
PAAF1-210ENST00000541951 EVA1CP58658 441 aa15.23■□□□□ 0.03
PAAF1-210ENST00000541951 NCAPD2Q15021 1401 aa15.22■□□□□ 0.03
PAAF1-210ENST00000541951 PLEKHG2Q9H7P9 1386 aa15.22■□□□□ 0.03
PAAF1-210ENST00000541951 NLRP2Q9NX02 1062 aa15.22■□□□□ 0.03
PAAF1-210ENST00000541951 BTG4Q9NY30 223 aa15.22■□□□□ 0.03
PAAF1-210ENST00000541951 ZBED9Q6R2W3 1325 aa15.21■□□□□ 0.03
PAAF1-210ENST00000541951 MEX3CQ5U5Q3 659 aaKnown RBP15.21■□□□□ 0.02
PAAF1-210ENST00000541951 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.02
PAAF1-210ENST00000541951 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.02
PAAF1-210ENST00000541951 NBPF6Q5VWK0 638 aa15.2■□□□□ 0.02
PAAF1-210ENST00000541951 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
PAAF1-210ENST00000541951 NBPF4Q96M43 638 aa15.2■□□□□ 0.02
PAAF1-210ENST00000541951 RGPD2P0DJD1 1756 aa15.19■□□□□ 0.02
PAAF1-210ENST00000541951 CRB1P82279 1406 aa15.19■□□□□ 0.02
PAAF1-210ENST00000541951 APAF1O14727 1248 aa15.19■□□□□ 0.02
PAAF1-210ENST00000541951 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
PAAF1-210ENST00000541951 STRN4Q9NRL3 753 aa15.19■□□□□ 0.02
PAAF1-210ENST00000541951 SLIT2O94813 1529 aa15.19■□□□□ 0.02
PAAF1-210ENST00000541951 LRP6O75581 1613 aa15.18■□□□□ 0.02
PAAF1-210ENST00000541951 NRAPQ86VF7 1730 aa15.18■□□□□ 0.02
PAAF1-210ENST00000541951 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
PAAF1-210ENST00000541951 RAPGEF4Q8WZA2 1011 aa15.18■□□□□ 0.02
PAAF1-210ENST00000541951 C8orf37Q96NL8 207 aa15.18■□□□□ 0.02
PAAF1-210ENST00000541951 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
PAAF1-210ENST00000541951 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
PAAF1-210ENST00000541951 GAS2L2Q8NHY3 880 aa15.17■□□□□ 0.02
PAAF1-210ENST00000541951 NGLY1Q96IV0 654 aa15.17■□□□□ 0.02
PAAF1-210ENST00000541951 CARD10Q9BWT7 1032 aa15.17■□□□□ 0.02
PAAF1-210ENST00000541951 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
PAAF1-210ENST00000541951 AMOTQ4VCS5 1084 aa15.16■□□□□ 0.02
PAAF1-210ENST00000541951 PARP4Q9UKK3 1724 aaKnown RBP15.15■□□□□ 0.02
PAAF1-210ENST00000541951 TATP17735 454 aaPredicted RBP15.15■□□□□ 0.02
PAAF1-210ENST00000541951 TMPOP42166 694 aaKnown RBP15.15■□□□□ 0.02
PAAF1-210ENST00000541951 NFE2L2Q16236 605 aa15.15■□□□□ 0.02
PAAF1-210ENST00000541951 LARP1Q6PKG0 1096 aaKnown RBP15.15■□□□□ 0.02
PAAF1-210ENST00000541951 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.15■□□□□ 0.02
PAAF1-210ENST00000541951 CCDC27Q2M243 656 aa15.14■□□□□ 0.01
PAAF1-210ENST00000541951 UNC5CLQ8IV45 518 aa15.14■□□□□ 0.01
PAAF1-210ENST00000541951 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
PAAF1-210ENST00000541951 PLEKHO1Q53GL0 409 aaPredicted RBP15.13■□□□□ 0.01
PAAF1-210ENST00000541951 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
PAAF1-210ENST00000541951 RIPK4P57078 832 aa15.12■□□□□ 0.01
PAAF1-210ENST00000541951 PDE3BQ13370 1112 aa15.12■□□□□ 0.01
PAAF1-210ENST00000541951 FNBP4Q8N3X1 1017 aaPredicted RBP15.12■□□□□ 0.01
PAAF1-210ENST00000541951 PHACTR3Q96KR7 559 aa15.12■□□□□ 0.01
PAAF1-210ENST00000541951 THRAP3Q9Y2W1 955 aaKnown RBP15.12■□□□□ 0.01
PAAF1-210ENST00000541951 IL2RBP14784 551 aa15.11■□□□□ 0.01
PAAF1-210ENST00000541951 CALD1Q05682 793 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms