RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 WHAMMQ8TF30 809 aa8.75□□□□□ -1.01
KNTC1-211ENST00000541427 ZBTB3Q9H5J0 574 aa8.75□□□□□ -1.01
KNTC1-211ENST00000541427 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
KNTC1-211ENST00000541427 IGHA1P01876 353 aa8.74□□□□□ -1.01
KNTC1-211ENST00000541427 C1QTNF2Q9BXJ5 285 aa8.74□□□□□ -1.01
KNTC1-211ENST00000541427 MAP4K5Q9Y4K4 846 aa8.74□□□□□ -1.01
KNTC1-211ENST00000541427 PER1O15534 1290 aaPredicted RBP8.73□□□□□ -1.01
KNTC1-211ENST00000541427 SLURP2P0DP57 97 aa8.73□□□□□ -1.01
KNTC1-211ENST00000541427 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
KNTC1-211ENST00000541427 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
KNTC1-211ENST00000541427 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
KNTC1-211ENST00000541427 CCDC116Q8IYX3 515 aa8.72□□□□□ -1.01
KNTC1-211ENST00000541427 MARSP56192 900 aaKnown RBP8.71□□□□□ -1.02
KNTC1-211ENST00000541427 SH3D19Q5HYK7 790 aa8.71□□□□□ -1.02
KNTC1-211ENST00000541427 ARMC2Q8NEN0 867 aa8.71□□□□□ -1.02
KNTC1-211ENST00000541427 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
KNTC1-211ENST00000541427 LIMD1Q9UGP4 676 aa8.71□□□□□ -1.02
KNTC1-211ENST00000541427 FOXK2Q01167 660 aa8.7□□□□□ -1.02
KNTC1-211ENST00000541427 PRPF38BQ5VTL8 546 aaKnown RBP8.7□□□□□ -1.02
KNTC1-211ENST00000541427 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
KNTC1-211ENST00000541427 TRMT44Q8IYL2 757 aaKnown RBP8.7□□□□□ -1.02
KNTC1-211ENST00000541427 VWA5B2Q8N398 1253 aa8.7□□□□□ -1.02
KNTC1-211ENST00000541427 RSPH6AQ9H0K4 717 aa8.7□□□□□ -1.02
KNTC1-211ENST00000541427 MAGEB6P1A0A0J9YX57 407 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 CDC14CA4D256 554 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 SLC35F4A4IF30 521 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 SPINT1O43278 529 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 ITGA6P23229 1130 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 CBLBQ13191 982 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 TSC1Q92574 1164 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
KNTC1-211ENST00000541427 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
KNTC1-211ENST00000541427 SKIV2LQ15477 1246 aaKnown RBP8.68□□□□□ -1.02
KNTC1-211ENST00000541427 CSPP1Q1MSJ5 1256 aa8.68□□□□□ -1.02
KNTC1-211ENST00000541427 NBPF14Q5TI25 921 aa8.68□□□□□ -1.02
KNTC1-211ENST00000541427 SH3BP5LQ7L8J4 393 aa8.68□□□□□ -1.02
KNTC1-211ENST00000541427 SCARF2Q96GP6 870 aaPredicted RBP8.68□□□□□ -1.02
KNTC1-211ENST00000541427 GOPCQ9HD26 462 aa8.68□□□□□ -1.02
KNTC1-211ENST00000541427 PPP1R26Q5T8A7 1209 aaPredicted RBP8.67□□□□□ -1.02
KNTC1-211ENST00000541427 Q6ZVU0 165 aa8.67□□□□□ -1.02
KNTC1-211ENST00000541427 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
KNTC1-211ENST00000541427 PROCA1Q8NCQ7 364 aaPredicted RBP8.67□□□□□ -1.02
KNTC1-211ENST00000541427 PGPEP1Q9NXJ5 209 aa8.67□□□□□ -1.02
KNTC1-211ENST00000541427 FBXO31Q5XUX0 539 aaPredicted RBP8.66□□□□□ -1.02
KNTC1-211ENST00000541427 QPCTQ16769 361 aa8.65□□□□□ -1.02
KNTC1-211ENST00000541427 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.65□□□□□ -1.02
KNTC1-211ENST00000541427 CARD14Q9BXL6 1004 aa8.65□□□□□ -1.02
KNTC1-211ENST00000541427 ADAMTS2O95450 1211 aa8.64□□□□□ -1.03
KNTC1-211ENST00000541427 TMEM132AQ24JP5 1023 aa8.64□□□□□ -1.03
KNTC1-211ENST00000541427 TUSC1Q2TAM9 212 aa8.64□□□□□ -1.03
KNTC1-211ENST00000541427 NUTM2BA6NNL0 878 aaPredicted RBP8.63□□□□□ -1.03
KNTC1-211ENST00000541427 NUTM2EB1AL46 878 aaPredicted RBP8.63□□□□□ -1.03
KNTC1-211ENST00000541427 CTSOP43234 321 aaPredicted RBP8.63□□□□□ -1.03
KNTC1-211ENST00000541427 XP32Q5T750 250 aa8.63□□□□□ -1.03
KNTC1-211ENST00000541427 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
KNTC1-211ENST00000541427 LYPD4Q6UWN0 246 aa8.63□□□□□ -1.03
KNTC1-211ENST00000541427 NUTM2AQ8IVF1 878 aaPredicted RBP8.63□□□□□ -1.03
KNTC1-211ENST00000541427 ERFEQ4G0M1 354 aa8.62□□□□□ -1.03
KNTC1-211ENST00000541427 AGBL1Q96MI9 1066 aa8.62□□□□□ -1.03
KNTC1-211ENST00000541427 LILRB3O75022 631 aa8.61□□□□□ -1.03
KNTC1-211ENST00000541427 MAP3K10Q02779 954 aa8.61□□□□□ -1.03
KNTC1-211ENST00000541427 PCMTD1Q96MG8 357 aaPredicted RBP8.61□□□□□ -1.03
KNTC1-211ENST00000541427 INSM2Q96T92 566 aaPredicted RBP8.61□□□□□ -1.03
KNTC1-211ENST00000541427 RELBQ01201 579 aa8.6□□□□□ -1.03
KNTC1-211ENST00000541427 SENP3-EIF4A1A0A087X0R7 540 aa8.59□□□□□ -1.03
KNTC1-211ENST00000541427 SRSF11Q05519 484 aaKnown RBP8.59□□□□□ -1.03
KNTC1-211ENST00000541427 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
KNTC1-211ENST00000541427 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
KNTC1-211ENST00000541427 GPKOWQ92917 476 aaPredicted RBP eCLIP8.59□□□□□ -1.03
KNTC1-211ENST00000541427 KCTD15Q96SI1 283 aaPredicted RBP8.59□□□□□ -1.03
KNTC1-211ENST00000541427 POLMQ9NP87 494 aaPredicted RBP8.59□□□□□ -1.03
KNTC1-211ENST00000541427 MSTNO14793 375 aa8.58□□□□□ -1.04
KNTC1-211ENST00000541427 ADAM23O75077 832 aa8.58□□□□□ -1.04
KNTC1-211ENST00000541427 CELA2BP08218 269 aaPredicted RBP8.58□□□□□ -1.04
KNTC1-211ENST00000541427 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
KNTC1-211ENST00000541427 DHX9Q08211 1270 aaKnown RBP8.57□□□□□ -1.04
KNTC1-211ENST00000541427 PLA2G4EQ3MJ16 856 aa8.57□□□□□ -1.04
KNTC1-211ENST00000541427 PPP2R2DQ66LE6 453 aa8.57□□□□□ -1.04
KNTC1-211ENST00000541427 RNF217Q8TC41 542 aa8.57□□□□□ -1.04
KNTC1-211ENST00000541427 SLC10A4Q96EP9 437 aa8.56□□□□□ -1.04
KNTC1-211ENST00000541427 ARHGAP9Q9BRR9 750 aa8.56□□□□□ -1.04
KNTC1-211ENST00000541427 ZNF395Q9H8N7 513 aaPredicted RBP8.56□□□□□ -1.04
KNTC1-211ENST00000541427 ENAMQ9NRM1 1142 aa8.56□□□□□ -1.04
KNTC1-211ENST00000541427 GAS6Q14393 721 aa8.55□□□□□ -1.04
KNTC1-211ENST00000541427 DCAF5Q96JK2 942 aa8.55□□□□□ -1.04
KNTC1-211ENST00000541427 SPOCK3Q9BQ16 436 aa8.55□□□□□ -1.04
KNTC1-211ENST00000541427 CDV3Q9UKY7 258 aaKnown RBP8.55□□□□□ -1.04
KNTC1-211ENST00000541427 RFC5P40937 340 aa8.54□□□□□ -1.04
KNTC1-211ENST00000541427 INTS6LQ5JSJ4 861 aaKnown RBP8.54□□□□□ -1.04
KNTC1-211ENST00000541427 PDXDC2PQ6P474 469 aa8.54□□□□□ -1.04
KNTC1-211ENST00000541427 CUEDC1Q9NWM3 386 aaPredicted RBP8.54□□□□□ -1.04
KNTC1-211ENST00000541427 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
KNTC1-211ENST00000541427 PHF20L1A8MW92 1017 aa8.53□□□□□ -1.04
KNTC1-211ENST00000541427 ITGB2P05107 769 aa8.52□□□□□ -1.05
KNTC1-211ENST00000541427 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
KNTC1-211ENST00000541427 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
KNTC1-211ENST00000541427 BEND7Q8N7W2 519 aaPredicted RBP8.51□□□□□ -1.05
KNTC1-211ENST00000541427 FKBPLQ9UIM3 349 aa8.5□□□□□ -1.05
KNTC1-211ENST00000541427 PROCP04070 461 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms