RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PDCL2Q8N4E4 241 aa18.06■□□□□ 0.48
HMGA2-210ENST00000541363 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
HMGA2-210ENST00000541363 CEP57L1Q8IYX8 460 aa18.06■□□□□ 0.48
HMGA2-210ENST00000541363 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
HMGA2-210ENST00000541363 HOMER2Q9NSB8 354 aa18.06■□□□□ 0.48
HMGA2-210ENST00000541363 BMS1Q14692 1282 aaKnown RBP18.05■□□□□ 0.48
HMGA2-210ENST00000541363 HOOK3Q86VS8 718 aa18.05■□□□□ 0.48
HMGA2-210ENST00000541363 FERP16591 822 aa18.05■□□□□ 0.48
HMGA2-210ENST00000541363 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
HMGA2-210ENST00000541363 GSTTP1A0A1W2PQM5 241 aa18.04■□□□□ 0.48
HMGA2-210ENST00000541363 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
HMGA2-210ENST00000541363 COMMD10Q9Y6G5 202 aa18.04■□□□□ 0.48
HMGA2-210ENST00000541363 NEK4P51957 841 aa18.04■□□□□ 0.48
HMGA2-210ENST00000541363 MAPK8IP2Q13387 824 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-210ENST00000541363 ARHGAP29Q52LW3 1261 aa18.04■□□□□ 0.48
HMGA2-210ENST00000541363 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
HMGA2-210ENST00000541363 NACAP1Q9BZK3 213 aa18.04■□□□□ 0.48
HMGA2-210ENST00000541363 CASQ1P31415 396 aa18.03■□□□□ 0.48
HMGA2-210ENST00000541363 ZNF76P36508 570 aa18.03■□□□□ 0.48
HMGA2-210ENST00000541363 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
HMGA2-210ENST00000541363 CCDC175P0C221 793 aa18.03■□□□□ 0.48
HMGA2-210ENST00000541363 DAAM2Q86T65 1068 aa18.03■□□□□ 0.48
HMGA2-210ENST00000541363 CDKL5O76039 1030 aa18.03■□□□□ 0.48
HMGA2-210ENST00000541363 SPA17Q15506 151 aa18.03■□□□□ 0.48
HMGA2-210ENST00000541363 UBXN4Q92575 508 aa18.03■□□□□ 0.48
HMGA2-210ENST00000541363 APAF1O14727 1248 aa18.03■□□□□ 0.48
HMGA2-210ENST00000541363 CCDC144AA2RUR9 1427 aa18.02■□□□□ 0.48
HMGA2-210ENST00000541363 SSBP05455 408 aaKnown RBP eCLIP18.02■□□□□ 0.48
HMGA2-210ENST00000541363 KRT85P78386 507 aa18.02■□□□□ 0.48
HMGA2-210ENST00000541363 RNF187Q5TA31 235 aaPredicted RBP18.02■□□□□ 0.48
HMGA2-210ENST00000541363 C6orf163Q5TEZ5 329 aa18.02■□□□□ 0.48
HMGA2-210ENST00000541363 CYP46A1Q9Y6A2 500 aa18.02■□□□□ 0.47
HMGA2-210ENST00000541363 CNNM1Q9NRU3 951 aa18.01■□□□□ 0.47
HMGA2-210ENST00000541363 PABPN1LA6NDY0 278 aaKnown RBP18.01■□□□□ 0.47
HMGA2-210ENST00000541363 IBSPP21815 317 aaPredicted RBP18.01■□□□□ 0.47
HMGA2-210ENST00000541363 CCDC150Q8NCX0 1101 aa18.01■□□□□ 0.47
HMGA2-210ENST00000541363 WDR33Q9C0J8 1336 aaKnown RBP18.01■□□□□ 0.47
HMGA2-210ENST00000541363 RRP9O43818 475 aaKnown RBP18.01■□□□□ 0.47
HMGA2-210ENST00000541363 CCDC178Q5BJE1 867 aa18.01■□□□□ 0.47
HMGA2-210ENST00000541363 GPATCH11Q8N954 259 aa18.01■□□□□ 0.47
HMGA2-210ENST00000541363 TAOK3Q9H2K8 898 aa18■□□□□ 0.47
HMGA2-210ENST00000541363 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
HMGA2-210ENST00000541363 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
HMGA2-210ENST00000541363 RB1CC1Q8TDY2 1594 aa17.99■□□□□ 0.47
HMGA2-210ENST00000541363 LUZP1Q86V48 1076 aa17.99■□□□□ 0.47
HMGA2-210ENST00000541363 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
HMGA2-210ENST00000541363 VPS36Q86VN1 386 aa17.99■□□□□ 0.47
HMGA2-210ENST00000541363 CEP131Q9UPN4 1083 aa17.99■□□□□ 0.47
HMGA2-210ENST00000541363 UPF3BQ9BZI7 483 aaKnown RBP17.99■□□□□ 0.47
HMGA2-210ENST00000541363 KIF2AO00139 706 aaPredicted RBP17.98■□□□□ 0.47
HMGA2-210ENST00000541363 PPP4R3AQ6IN85 833 aa17.98■□□□□ 0.47
HMGA2-210ENST00000541363 VGFO15240 615 aaPredicted RBP17.98■□□□□ 0.47
HMGA2-210ENST00000541363 STK3Q13188 491 aa17.98■□□□□ 0.47
HMGA2-210ENST00000541363 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
HMGA2-210ENST00000541363 CCDC30Q5VVM6 783 aa17.98■□□□□ 0.47
HMGA2-210ENST00000541363 TNIP1Q15025 636 aa17.98■□□□□ 0.47
HMGA2-210ENST00000541363 CALCOCO1Q9P1Z2 691 aa17.98■□□□□ 0.47
HMGA2-210ENST00000541363 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.98■□□□□ 0.47
HMGA2-210ENST00000541363 V9GYY5 206 aaPredicted RBP17.98■□□□□ 0.47
HMGA2-210ENST00000541363 CTNNBL1Q8WYA6 563 aaPredicted RBP17.97■□□□□ 0.47
HMGA2-210ENST00000541363 KIF5CO60282 957 aa17.97■□□□□ 0.47
HMGA2-210ENST00000541363 GNAI3P08754 354 aa17.97■□□□□ 0.47
HMGA2-210ENST00000541363 ZSCAN25Q6NSZ9 544 aa17.97■□□□□ 0.47
HMGA2-210ENST00000541363 TSNARE1Q96NA8 513 aa17.97■□□□□ 0.47
HMGA2-210ENST00000541363 RBM5P52756 815 aaKnown RBP eCLIP17.97■□□□□ 0.47
HMGA2-210ENST00000541363 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
HMGA2-210ENST00000541363 SPECC1LQ69YQ0 1117 aa17.96■□□□□ 0.47
HMGA2-210ENST00000541363 TSG101Q99816 390 aa17.96■□□□□ 0.47
HMGA2-210ENST00000541363 ZSCAN12O43309 604 aa17.96■□□□□ 0.47
HMGA2-210ENST00000541363 TIGD1Q96MW7 591 aa17.96■□□□□ 0.47
HMGA2-210ENST00000541363 MINK1Q8N4C8 1332 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-210ENST00000541363 ST20-MTHFSA0A0A6YYL1 179 aa17.96■□□□□ 0.46
HMGA2-210ENST00000541363 SPDYE4A6NLX3 237 aa17.95■□□□□ 0.46
HMGA2-210ENST00000541363 SPATA32Q96LK8 384 aa17.95■□□□□ 0.46
HMGA2-210ENST00000541363 SSX2IPQ9Y2D8 614 aa17.95■□□□□ 0.46
HMGA2-210ENST00000541363 FKBP15Q5T1M5 1219 aa17.95■□□□□ 0.46
HMGA2-210ENST00000541363 WASF1Q92558 559 aa17.95■□□□□ 0.46
HMGA2-210ENST00000541363 CUX2O14529 1486 aa17.95■□□□□ 0.46
HMGA2-210ENST00000541363 CTNNA2P26232 953 aa17.95■□□□□ 0.46
HMGA2-210ENST00000541363 HNRNPMP52272 730 aaKnown RBP eCLIP17.94■□□□□ 0.462e-8■■□□□ 11.6
HMGA2-210ENST00000541363 SREK1Q8WXA9 508 aaKnown RBP17.94■□□□□ 0.46
HMGA2-210ENST00000541363 PSMD1Q99460 953 aa17.94■□□□□ 0.46
HMGA2-210ENST00000541363 LARP1BQ659C4 914 aaKnown RBP17.94■□□□□ 0.46
HMGA2-210ENST00000541363 TMEM87AQ8NBN3 555 aa17.94■□□□□ 0.46
HMGA2-210ENST00000541363 NUP62CLQ9H1M0 184 aa17.94■□□□□ 0.46
HMGA2-210ENST00000541363 GRPEL1Q9HAV7 217 aa17.94■□□□□ 0.46
HMGA2-210ENST00000541363 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
HMGA2-210ENST00000541363 TMCO5BA8MYB1 307 aa17.94■□□□□ 0.46
HMGA2-210ENST00000541363 FERMT2Q96AC1 680 aa17.94■□□□□ 0.46
HMGA2-210ENST00000541363 POLR3GO15318 223 aaPredicted RBP17.94■□□□□ 0.46
HMGA2-210ENST00000541363 MIA2Q96PC5 1412 aa17.93■□□□□ 0.46
HMGA2-210ENST00000541363 FAM177BA6PVY3 158 aa17.93■□□□□ 0.46
HMGA2-210ENST00000541363 FGFR1OPO95684 399 aaKnown RBP17.93■□□□□ 0.46
HMGA2-210ENST00000541363 CFAP100Q494V2 611 aa17.93■□□□□ 0.46
HMGA2-210ENST00000541363 IPO4Q8TEX9 1081 aaKnown RBP17.93■□□□□ 0.46
HMGA2-210ENST00000541363 CACNA2D4Q7Z3S7 1137 aa17.93■□□□□ 0.46
HMGA2-210ENST00000541363 FSD2A1L4K1 749 aa17.93■□□□□ 0.46
HMGA2-210ENST00000541363 FERMT1Q9BQL6 677 aa17.92■□□□□ 0.46
HMGA2-210ENST00000541363 DRC1Q96MC2 740 aa17.92■□□□□ 0.46
HMGA2-210ENST00000541363 RAB3IL1Q8TBN0 382 aa17.92■□□□□ 0.46
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