RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
LMO3-223ENST00000540590 PNISRQ8TF01 805 aaKnown RBP16.78■□□□□ 0.28
LMO3-223ENST00000540590 COL22A1Q8NFW1 1626 aaPredicted RBP16.78■□□□□ 0.28
LMO3-223ENST00000540590 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
LMO3-223ENST00000540590 CFAP53Q96M91 514 aa16.77■□□□□ 0.28
LMO3-223ENST00000540590 INSRP06213 1382 aa16.77■□□□□ 0.27
LMO3-223ENST00000540590 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.27
LMO3-223ENST00000540590 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
LMO3-223ENST00000540590 GCP02774 474 aa16.76■□□□□ 0.27
LMO3-223ENST00000540590 LRRC59Q96AG4 307 aaKnown RBP16.76■□□□□ 0.27
LMO3-223ENST00000540590 ABCC6O95255 1503 aa16.75■□□□□ 0.27
LMO3-223ENST00000540590 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
LMO3-223ENST00000540590 CABLES1Q8TDN4 633 aa16.75■□□□□ 0.27
LMO3-223ENST00000540590 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
LMO3-223ENST00000540590 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
LMO3-223ENST00000540590 FLT4P35916 1363 aa16.73■□□□□ 0.27
LMO3-223ENST00000540590 COL18A1P39060 1754 aa16.72■□□□□ 0.27
LMO3-223ENST00000540590 AMPHP49418 695 aa16.72■□□□□ 0.27
LMO3-223ENST00000540590 ARHGEF25Q86VW2 580 aa16.72■□□□□ 0.27
LMO3-223ENST00000540590 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
LMO3-223ENST00000540590 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
LMO3-223ENST00000540590 HOXC9P31274 260 aa16.7■□□□□ 0.26
LMO3-223ENST00000540590 ZC3H6P61129 1189 aaKnown RBP16.7■□□□□ 0.26
LMO3-223ENST00000540590 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
LMO3-223ENST00000540590 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
LMO3-223ENST00000540590 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
LMO3-223ENST00000540590 CPDO75976 1380 aa16.69■□□□□ 0.26
LMO3-223ENST00000540590 IL13P35225 146 aa16.68■□□□□ 0.26
LMO3-223ENST00000540590 IP6K1Q92551 441 aa16.68■□□□□ 0.26
LMO3-223ENST00000540590 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
LMO3-223ENST00000540590 KIAA0232Q92628 1395 aa16.67■□□□□ 0.26
LMO3-223ENST00000540590 RGPD2P0DJD1 1756 aa16.67■□□□□ 0.26
LMO3-223ENST00000540590 LMO7Q8WWI1 1683 aa16.67■□□□□ 0.26
LMO3-223ENST00000540590 HAP1P54257 671 aaPredicted RBP16.67■□□□□ 0.26
LMO3-223ENST00000540590 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
LMO3-223ENST00000540590 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
LMO3-223ENST00000540590 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
LMO3-223ENST00000540590 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
LMO3-223ENST00000540590 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
LMO3-223ENST00000540590 RBM42Q9BTD8 480 aaKnown RBP16.65■□□□□ 0.26
LMO3-223ENST00000540590 JCADQ9P266 1359 aa16.64■□□□□ 0.26
LMO3-223ENST00000540590 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
LMO3-223ENST00000540590 HSPA1LP34931 641 aa16.64■□□□□ 0.25
LMO3-223ENST00000540590 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
LMO3-223ENST00000540590 CHRNA2Q15822 529 aa16.64■□□□□ 0.25
LMO3-223ENST00000540590 COL14A1Q05707 1796 aaKnown RBP16.64■□□□□ 0.25
LMO3-223ENST00000540590 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
LMO3-223ENST00000540590 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
LMO3-223ENST00000540590 AXIN2Q9Y2T1 843 aa16.63■□□□□ 0.25
LMO3-223ENST00000540590 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
LMO3-223ENST00000540590 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
LMO3-223ENST00000540590 PLCH1Q4KWH8 1693 aa16.61■□□□□ 0.25
LMO3-223ENST00000540590 CCDC146Q8IYE0 955 aa16.6■□□□□ 0.25
LMO3-223ENST00000540590 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
LMO3-223ENST00000540590 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
LMO3-223ENST00000540590 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
LMO3-223ENST00000540590 HMOX1P09601 288 aa16.59■□□□□ 0.25
LMO3-223ENST00000540590 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
LMO3-223ENST00000540590 EYA1Q99502 592 aa16.59■□□□□ 0.25
LMO3-223ENST00000540590 ERBB3P21860 1342 aa16.59■□□□□ 0.25
LMO3-223ENST00000540590 SPATA31A6Q5VVP1 1343 aa16.59■□□□□ 0.25
LMO3-223ENST00000540590 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
LMO3-223ENST00000540590 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
LMO3-223ENST00000540590 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
LMO3-223ENST00000540590 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
LMO3-223ENST00000540590 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
LMO3-223ENST00000540590 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
LMO3-223ENST00000540590 COL5A2P05997 1499 aaPredicted RBP16.57■□□□□ 0.24
LMO3-223ENST00000540590 FCHSD2O94868 740 aa16.57■□□□□ 0.24
LMO3-223ENST00000540590 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
LMO3-223ENST00000540590 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
LMO3-223ENST00000540590 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 KDRP35968 1356 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 SULT6B1Q6IMI4 303 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 NRAPQ86VF7 1730 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 LRP6O75581 1613 aa16.56■□□□□ 0.24
LMO3-223ENST00000540590 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
LMO3-223ENST00000540590 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
LMO3-223ENST00000540590 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
LMO3-223ENST00000540590 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
LMO3-223ENST00000540590 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
LMO3-223ENST00000540590 APAF1O14727 1248 aa16.53■□□□□ 0.24
LMO3-223ENST00000540590 WDR17Q8IZU2 1322 aa16.52■□□□□ 0.24
LMO3-223ENST00000540590 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
LMO3-223ENST00000540590 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.24
LMO3-223ENST00000540590 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.24
LMO3-223ENST00000540590 BTG4Q9NY30 223 aa16.52■□□□□ 0.24
LMO3-223ENST00000540590 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
LMO3-223ENST00000540590 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
LMO3-223ENST00000540590 SLIT2O94813 1529 aa16.5■□□□□ 0.23
LMO3-223ENST00000540590 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
LMO3-223ENST00000540590 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
LMO3-223ENST00000540590 STRN4Q9NRL3 753 aa16.5■□□□□ 0.23
LMO3-223ENST00000540590 NEFMP07197 916 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms