RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 APLP1P51693 650 aa6.64□□□□□ -1.35
TSG101-205ENST00000540555 EP400Q96L91 3159 aa6.63□□□□□ -1.35
TSG101-205ENST00000540555 KDM4AO75164 1064 aa6.63□□□□□ -1.35
TSG101-205ENST00000540555 RXRBP28702 533 aa6.63□□□□□ -1.35
TSG101-205ENST00000540555 THEMISQ8N1K5 641 aaPredicted RBP6.63□□□□□ -1.35
TSG101-205ENST00000540555 TRIM52Q96A61 297 aa6.63□□□□□ -1.35
TSG101-205ENST00000540555 KDM5DQ9BY66 1539 aa6.63□□□□□ -1.35
TSG101-205ENST00000540555 TBC1D2Q9BYX2 928 aa6.63□□□□□ -1.35
TSG101-205ENST00000540555 POLR1AO95602 1720 aaPredicted RBP6.62□□□□□ -1.35
TSG101-205ENST00000540555 PLXNC1O60486 1568 aa6.62□□□□□ -1.35
TSG101-205ENST00000540555 SETBP1Q9Y6X0 1596 aa6.62□□□□□ -1.35
TSG101-205ENST00000540555 ABCC1P33527 1531 aa6.62□□□□□ -1.35
TSG101-205ENST00000540555 TNRQ92752 1358 aa6.62□□□□□ -1.35
TSG101-205ENST00000540555 SPATA31A6Q5VVP1 1343 aa6.62□□□□□ -1.35
TSG101-205ENST00000540555 ACTN4O43707 911 aaKnown RBP6.62□□□□□ -1.35
TSG101-205ENST00000540555 ITGBL1O95965 494 aaPredicted RBP6.62□□□□□ -1.35
TSG101-205ENST00000540555 FUT2Q10981 343 aa6.62□□□□□ -1.35
TSG101-205ENST00000540555 MYSM1Q5VVJ2 828 aa6.62□□□□□ -1.35
TSG101-205ENST00000540555 NECTIN2Q92692 538 aa6.62□□□□□ -1.35
TSG101-205ENST00000540555 LRP6O75581 1613 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 FGD6Q6ZV73 1430 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 MOXD2PA6NHM9 499 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 KMT5BQ4FZB7 885 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 SH3D19Q5HYK7 790 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 NYAP1Q6ZVC0 841 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 NUTM1Q86Y26 1132 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 GOPCQ9HD26 462 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 STRCP1A6NGW2 1772 aa6.61□□□□□ -1.35
TSG101-205ENST00000540555 NLRP1Q9C000 1473 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 KIDINS220Q9ULH0 1771 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 HOXA2O43364 376 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 NDUFV2P19404 249 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 USP46P62068 366 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 SKIV2LQ15477 1246 aaKnown RBP6.6□□□□□ -1.35
TSG101-205ENST00000540555 DIXDC1Q155Q3 683 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 Q6ZNB5 142 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 HLA-CQ95604 372 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 RSPH6AQ9H0K4 717 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 ARHGAP5Q13017 1502 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 LRRC9Q6ZRR7 1453 aa6.6□□□□□ -1.35
TSG101-205ENST00000540555 RGS12O14924 1447 aa6.59□□□□□ -1.35
TSG101-205ENST00000540555 SUPT5HO00267 1087 aaKnown RBP6.59□□□□□ -1.35
TSG101-205ENST00000540555 ATP6V1AP38606 617 aa6.59□□□□□ -1.35
TSG101-205ENST00000540555 PUS10Q3MIT2 529 aaKnown RBP6.59□□□□□ -1.35
TSG101-205ENST00000540555 LIMD1Q9UGP4 676 aa6.59□□□□□ -1.35
TSG101-205ENST00000540555 ATP7AQ04656 1500 aa6.59□□□□□ -1.35
TSG101-205ENST00000540555 PZPP20742 1482 aa6.59□□□□□ -1.36
TSG101-205ENST00000540555 MIA2Q96PC5 1412 aa6.59□□□□□ -1.36
TSG101-205ENST00000540555 SPTLC1O15269 473 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 GJA5P36382 358 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 GUCA2AQ02747 115 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 MORN1Q5T089 497 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 RSBN1LQ6PCB5 846 aaPredicted RBP6.58□□□□□ -1.36
TSG101-205ENST00000540555 RIC3Q7Z5B4 369 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 PROCA1Q8NCQ7 364 aaPredicted RBP6.58□□□□□ -1.36
TSG101-205ENST00000540555 PRR14Q9BWN1 585 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 POLR3EQ9NVU0 708 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 PCDHGC3Q9UN70 934 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 FAM135AQ9P2D6 1515 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 IQGAP1P46940 1657 aa6.58□□□□□ -1.36
TSG101-205ENST00000540555 CLTCQ00610 1675 aaKnown RBP6.58□□□□□ -1.36
TSG101-205ENST00000540555 UGGT1Q9NYU2 1555 aa6.57□□□□□ -1.36
TSG101-205ENST00000540555 MYO5CQ9NQX4 1742 aa6.57□□□□□ -1.36
TSG101-205ENST00000540555 FBXO31Q5XUX0 539 aaPredicted RBP6.57□□□□□ -1.36
TSG101-205ENST00000540555 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.57□□□□□ -1.36
TSG101-205ENST00000540555 PCDHB15Q9Y5E8 787 aa6.57□□□□□ -1.36
TSG101-205ENST00000540555 A2MP01023 1474 aa6.57□□□□□ -1.36
TSG101-205ENST00000540555 TROQ12816 1431 aaPredicted RBP6.57□□□□□ -1.36
TSG101-205ENST00000540555 SAMD9LQ8IVG5 1584 aa6.57□□□□□ -1.36
TSG101-205ENST00000540555 TMEM94Q12767 1356 aa6.57□□□□□ -1.36
TSG101-205ENST00000540555 ATAD2Q6PL18 1390 aa6.57□□□□□ -1.36
TSG101-205ENST00000540555 SUPT6HQ7KZ85 1726 aaKnown RBP6.56□□□□□ -1.36
TSG101-205ENST00000540555 MAP3K1Q13233 1512 aa6.56□□□□□ -1.36
TSG101-205ENST00000540555 CLK2P49760 499 aaKnown RBP6.56□□□□□ -1.36
TSG101-205ENST00000540555 TUSC1Q2TAM9 212 aa6.56□□□□□ -1.36
TSG101-205ENST00000540555 GRIPAP1Q4V328 841 aa6.56□□□□□ -1.36
TSG101-205ENST00000540555 BLOC1S3Q6QNY0 202 aa6.56□□□□□ -1.36
TSG101-205ENST00000540555 CCDC125Q86Z20 511 aa6.56□□□□□ -1.36
TSG101-205ENST00000540555 SLC27A5Q9Y2P5 690 aa6.56□□□□□ -1.36
TSG101-205ENST00000540555 PCDHB3Q9Y5E6 796 aa6.56□□□□□ -1.36
TSG101-205ENST00000540555 LRP5O75197 1615 aa6.56□□□□□ -1.36
TSG101-205ENST00000540555 ROBO1Q9Y6N7 1651 aa6.55□□□□□ -1.36
TSG101-205ENST00000540555 SPAG9O60271 1321 aaKnown RBP6.55□□□□□ -1.36
TSG101-205ENST00000540555 FDX1P10109 184 aa6.55□□□□□ -1.36
TSG101-205ENST00000540555 RBM6P78332 1123 aaKnown RBP6.55□□□□□ -1.36
TSG101-205ENST00000540555 TJAP1Q5JTD0 557 aa6.55□□□□□ -1.36
TSG101-205ENST00000540555 GGT6Q6P531 493 aa6.55□□□□□ -1.36
TSG101-205ENST00000540555 SCUBE3Q8IX30 993 aa6.55□□□□□ -1.36
TSG101-205ENST00000540555 CDK11AQ9UQ88 783 aaPredicted RBP6.55□□□□□ -1.36
TSG101-205ENST00000540555 ZC3H13Q5T200 1668 aaKnown RBP6.55□□□□□ -1.36
TSG101-205ENST00000540555 COL16A1Q07092 1604 aaPredicted RBP6.54□□□□□ -1.36
TSG101-205ENST00000540555 KIF14Q15058 1648 aa6.54□□□□□ -1.36
TSG101-205ENST00000540555 LAPTM4AQ15012 233 aa6.54□□□□□ -1.36
TSG101-205ENST00000540555 CEP350Q5VT06 3117 aa6.54□□□□□ -1.36
TSG101-205ENST00000540555 ARHGAP23Q9P227 1491 aa6.53□□□□□ -1.36
TSG101-205ENST00000540555 KIAA1107Q9UPP5 1409 aa6.53□□□□□ -1.36
TSG101-205ENST00000540555 ITSN2Q9NZM3 1697 aa6.53□□□□□ -1.36
TSG101-205ENST00000540555 LILRB3O75022 631 aa6.53□□□□□ -1.36
TSG101-205ENST00000540555 COPS2P61201 443 aa6.53□□□□□ -1.36
TSG101-205ENST00000540555 QPCTQ16769 361 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms