RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 RGPD1P0DJD0 1748 aa11.35□□□□□ -0.59
NPIPB4-212ENST00000540103 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
NPIPB4-212ENST00000540103 NFAT5O94916 1531 aa11.35□□□□□ -0.59
NPIPB4-212ENST00000540103 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
NPIPB4-212ENST00000540103 PARP4Q9UKK3 1724 aaKnown RBP11.34□□□□□ -0.59
NPIPB4-212ENST00000540103 WDR17Q8IZU2 1322 aa11.34□□□□□ -0.59
NPIPB4-212ENST00000540103 ST20-MTHFSA0A0A6YYL1 179 aa11.33□□□□□ -0.6
NPIPB4-212ENST00000540103 NME9Q86XW9 330 aa11.33□□□□□ -0.6
NPIPB4-212ENST00000540103 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.32□□□□□ -0.6
NPIPB4-212ENST00000540103 CARD10Q9BWT7 1032 aa11.32□□□□□ -0.6
NPIPB4-212ENST00000540103 USP54Q70EL1 1684 aa11.32□□□□□ -0.6
NPIPB4-212ENST00000540103 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
NPIPB4-212ENST00000540103 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
NPIPB4-212ENST00000540103 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
NPIPB4-212ENST00000540103 APBA3O96018 575 aa11.31□□□□□ -0.6
NPIPB4-212ENST00000540103 TOM1L2Q6ZVM7 507 aa11.31□□□□□ -0.6
NPIPB4-212ENST00000540103 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
NPIPB4-212ENST00000540103 SBF2Q86WG5 1849 aa11.3□□□□□ -0.6
NPIPB4-212ENST00000540103 SOX12O15370 315 aa11.3□□□□□ -0.6
NPIPB4-212ENST00000540103 PTF1AQ7RTS3 328 aa11.3□□□□□ -0.6
NPIPB4-212ENST00000540103 POTEDQ86YR6 584 aa11.3□□□□□ -0.6
NPIPB4-212ENST00000540103 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
NPIPB4-212ENST00000540103 A0A1W2PP64 1363 aa11.29□□□□□ -0.6
NPIPB4-212ENST00000540103 BCL9O00512 1426 aa11.29□□□□□ -0.6
NPIPB4-212ENST00000540103 EDC4Q6P2E9 1401 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-212ENST00000540103 DDB1Q16531 1140 aa11.29□□□□□ -0.6
NPIPB4-212ENST00000540103 HDGFL2Q7Z4V5 671 aaPredicted RBP11.29□□□□□ -0.6
NPIPB4-212ENST00000540103 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
NPIPB4-212ENST00000540103 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
NPIPB4-212ENST00000540103 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
NPIPB4-212ENST00000540103 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
NPIPB4-212ENST00000540103 PROM2Q8N271 834 aa11.28□□□□□ -0.6
NPIPB4-212ENST00000540103 CDCA7Q9BWT1 371 aaPredicted RBP11.28□□□□□ -0.6
NPIPB4-212ENST00000540103 TERF2IPQ9NYB0 399 aa11.28□□□□□ -0.6
NPIPB4-212ENST00000540103 ABCC6O95255 1503 aa11.28□□□□□ -0.6
NPIPB4-212ENST00000540103 LRRC37A3O60309 1634 aa11.27□□□□□ -0.6
NPIPB4-212ENST00000540103 OVOS2A0A0J9YW53 1432 aa11.27□□□□□ -0.6
NPIPB4-212ENST00000540103 OVOS2Q6IE36 1432 aa11.27□□□□□ -0.6
NPIPB4-212ENST00000540103 PLSCR1O15162 318 aa11.27□□□□□ -0.61
NPIPB4-212ENST00000540103 SLC24A1O60721 1099 aa11.27□□□□□ -0.61
NPIPB4-212ENST00000540103 WNK3Q9BYP7 1800 aa11.27□□□□□ -0.61
NPIPB4-212ENST00000540103 ERBB3P21860 1342 aa11.27□□□□□ -0.61
NPIPB4-212ENST00000540103 LRP5O75197 1615 aa11.27□□□□□ -0.61
NPIPB4-212ENST00000540103 RREB1Q92766 1687 aa11.27□□□□□ -0.61
NPIPB4-212ENST00000540103 FBLN1P23142 703 aa11.26□□□□□ -0.61
NPIPB4-212ENST00000540103 PPP4R3CPQ6ZMV5 832 aa11.26□□□□□ -0.61
NPIPB4-212ENST00000540103 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
NPIPB4-212ENST00000540103 CCDC7Q96M83 1385 aa11.26□□□□□ -0.61
NPIPB4-212ENST00000540103 NINLQ9Y2I6 1382 aa11.26□□□□□ -0.61
NPIPB4-212ENST00000540103 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
NPIPB4-212ENST00000540103 EXOC5O00471 708 aa11.25□□□□□ -0.61
NPIPB4-212ENST00000540103 CSB-PGBD3P0DP91 1061 aa11.25□□□□□ -0.61
NPIPB4-212ENST00000540103 IP6K1Q92551 441 aa11.25□□□□□ -0.61
NPIPB4-212ENST00000540103 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
NPIPB4-212ENST00000540103 CLSPNQ9HAW4 1339 aa11.25□□□□□ -0.61
NPIPB4-212ENST00000540103 NUP188Q5SRE5 1749 aa11.24□□□□□ -0.61
NPIPB4-212ENST00000540103 LTN1O94822 1766 aa11.24□□□□□ -0.61
NPIPB4-212ENST00000540103 FYB1O15117 783 aa11.24□□□□□ -0.61
NPIPB4-212ENST00000540103 USP47Q96K76 1375 aa11.24□□□□□ -0.61
NPIPB4-212ENST00000540103 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
NPIPB4-212ENST00000540103 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
NPIPB4-212ENST00000540103 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
NPIPB4-212ENST00000540103 KCNQ2O43526 872 aa11.22□□□□□ -0.61
NPIPB4-212ENST00000540103 TMF1P82094 1093 aa11.22□□□□□ -0.61
NPIPB4-212ENST00000540103 MAP3K19Q56UN5 1328 aa11.22□□□□□ -0.61
NPIPB4-212ENST00000540103 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
NPIPB4-212ENST00000540103 RGPD3A6NKT7 1758 aaPredicted RBP11.21□□□□□ -0.61
NPIPB4-212ENST00000540103 RGPD4Q7Z3J3 1758 aa11.21□□□□□ -0.61
NPIPB4-212ENST00000540103 IL2RBP14784 551 aa11.21□□□□□ -0.61
NPIPB4-212ENST00000540103 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.61
NPIPB4-212ENST00000540103 ANO8Q9HCE9 1232 aaPredicted RBP11.21□□□□□ -0.61
NPIPB4-212ENST00000540103 TNS2Q63HR2 1409 aa11.2□□□□□ -0.62
NPIPB4-212ENST00000540103 HOXC9P31274 260 aa11.2□□□□□ -0.62
NPIPB4-212ENST00000540103 NBPF14Q5TI25 921 aa11.2□□□□□ -0.62
NPIPB4-212ENST00000540103 COG3Q96JB2 828 aa11.2□□□□□ -0.62
NPIPB4-212ENST00000540103 TXNRD1Q16881 649 aa11.18□□□□□ -0.62
NPIPB4-212ENST00000540103 PDGFDQ9GZP0 370 aaPredicted RBP11.18□□□□□ -0.62
NPIPB4-212ENST00000540103 GGNBP2Q9H3C7 697 aa11.18□□□□□ -0.62
NPIPB4-212ENST00000540103 KAT6BQ8WYB5 2073 aa11.17□□□□□ -0.62
NPIPB4-212ENST00000540103 RRS1Q15050 365 aaKnown RBP11.17□□□□□ -0.62
NPIPB4-212ENST00000540103 LTV1Q96GA3 475 aaPredicted RBP11.17□□□□□ -0.62
NPIPB4-212ENST00000540103 ACSBG1Q96GR2 724 aa11.17□□□□□ -0.62
NPIPB4-212ENST00000540103 RGPD2P0DJD1 1756 aa11.17□□□□□ -0.62
NPIPB4-212ENST00000540103 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
NPIPB4-212ENST00000540103 AMPHP49418 695 aa11.16□□□□□ -0.62
NPIPB4-212ENST00000540103 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
NPIPB4-212ENST00000540103 NBPF6Q5VWK0 638 aa11.16□□□□□ -0.62
NPIPB4-212ENST00000540103 NBPF4Q96M43 638 aa11.16□□□□□ -0.62
NPIPB4-212ENST00000540103 NHSQ6T4R5 1651 aa11.15□□□□□ -0.62
NPIPB4-212ENST00000540103 CASZ1Q86V15 1759 aa11.15□□□□□ -0.62
NPIPB4-212ENST00000540103 MYOM1P52179 1685 aa11.14□□□□□ -0.63
NPIPB4-212ENST00000540103 SLC15A2Q16348 729 aa11.14□□□□□ -0.63
NPIPB4-212ENST00000540103 HSP90AB2PQ58FF8 381 aa11.14□□□□□ -0.63
NPIPB4-212ENST00000540103 LRRC4BQ9NT99 713 aa11.14□□□□□ -0.63
NPIPB4-212ENST00000540103 RTL1A6NKG5 1358 aa11.14□□□□□ -0.63
NPIPB4-212ENST00000540103 SHANK3Q9BYB0 1731 aa11.13□□□□□ -0.63
NPIPB4-212ENST00000540103 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
NPIPB4-212ENST00000540103 DDX54Q8TDD1 881 aaKnown RBP11.13□□□□□ -0.63
NPIPB4-212ENST00000540103 SPON1Q9HCB6 807 aa11.13□□□□□ -0.63
NPIPB4-212ENST00000540103 BTAF1O14981 1849 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms