RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 NGLY1Q96IV0 654 aa20.77■□□□□ 0.92
DDB1-216ENST00000539739 C8orf37Q96NL8 207 aa20.77■□□□□ 0.92
DDB1-216ENST00000539739 CFAP53Q96M91 514 aa20.76■□□□□ 0.91
DDB1-216ENST00000539739 SMG6Q86US8 1419 aaKnown RBP20.76■□□□□ 0.91
DDB1-216ENST00000539739 LTN1O94822 1766 aa20.76■□□□□ 0.91
DDB1-216ENST00000539739 ABCC6O95255 1503 aa20.75■□□□□ 0.91
DDB1-216ENST00000539739 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
DDB1-216ENST00000539739 HSP90AB2PQ58FF8 381 aa20.74■□□□□ 0.91
DDB1-216ENST00000539739 BTG4Q9NY30 223 aa20.74■□□□□ 0.91
DDB1-216ENST00000539739 AXIN2Q9Y2T1 843 aa20.74■□□□□ 0.91
DDB1-216ENST00000539739 COL14A1Q05707 1796 aaKnown RBP20.73■□□□□ 0.91
DDB1-216ENST00000539739 INSRP06213 1382 aa20.73■□□□□ 0.91
DDB1-216ENST00000539739 CDK12Q9NYV4 1490 aaPredicted RBP20.73■□□□□ 0.91
DDB1-216ENST00000539739 EVA1CP58658 441 aa20.72■□□□□ 0.91
DDB1-216ENST00000539739 PEAK1Q9H792 1746 aa20.7■□□□□ 0.9
DDB1-216ENST00000539739 FNBP4Q8N3X1 1017 aaPredicted RBP20.7■□□□□ 0.9
DDB1-216ENST00000539739 ANKRD24Q8TF21 1146 aa20.7■□□□□ 0.9
DDB1-216ENST00000539739 LTV1Q96GA3 475 aaPredicted RBP20.7■□□□□ 0.9
DDB1-216ENST00000539739 COL18A1P39060 1754 aa20.7■□□□□ 0.9
DDB1-216ENST00000539739 CSB-PGBD3P0DP91 1061 aa20.69■□□□□ 0.9
DDB1-216ENST00000539739 MIER1Q8N108 512 aa20.69■□□□□ 0.9
DDB1-216ENST00000539739 CAMTA1Q9Y6Y1 1673 aa20.69■□□□□ 0.9
DDB1-216ENST00000539739 SLIT2O94813 1529 aa20.68■□□□□ 0.9
DDB1-216ENST00000539739 LMO7Q8WWI1 1683 aa20.68■□□□□ 0.9
DDB1-216ENST00000539739 DIAPH1O60610 1272 aaKnown RBP20.68■□□□□ 0.9
DDB1-216ENST00000539739 STRN4Q9NRL3 753 aa20.68■□□□□ 0.9
DDB1-216ENST00000539739 ERBB3P21860 1342 aa20.68■□□□□ 0.9
DDB1-216ENST00000539739 UNC5CLQ8IV45 518 aa20.67■□□□□ 0.9
DDB1-216ENST00000539739 USP21Q9UK80 565 aa20.67■□□□□ 0.9
DDB1-216ENST00000539739 AFF2P51816 1311 aa20.67■□□□□ 0.9
DDB1-216ENST00000539739 EIF4A2Q14240 407 aaKnown RBP20.67■□□□□ 0.9
DDB1-216ENST00000539739 NUDCQ9Y266 331 aa20.67■□□□□ 0.9
DDB1-216ENST00000539739 COL5A2P05997 1499 aaPredicted RBP20.67■□□□□ 0.9
DDB1-216ENST00000539739 PLCH1Q4KWH8 1693 aa20.66■□□□□ 0.9
DDB1-216ENST00000539739 CCER2I3L3R5 266 aa20.65■□□□□ 0.9
DDB1-216ENST00000539739 MRS2Q9HD23 443 aa20.65■□□□□ 0.9
DDB1-216ENST00000539739 WDR17Q8IZU2 1322 aa20.65■□□□□ 0.9
DDB1-216ENST00000539739 NWD2Q9ULI1 1742 aa20.65■□□□□ 0.9
DDB1-216ENST00000539739 IL13P35225 146 aa20.64■□□□□ 0.9
DDB1-216ENST00000539739 TOM1L2Q6ZVM7 507 aa20.64■□□□□ 0.9
DDB1-216ENST00000539739 ERICH6Q7L0X2 663 aa20.64■□□□□ 0.9
DDB1-216ENST00000539739 RGPD5Q99666 1765 aa20.64■□□□□ 0.89
DDB1-216ENST00000539739 NLRP2Q9NX02 1062 aa20.64■□□□□ 0.89
DDB1-216ENST00000539739 LARP1Q6PKG0 1096 aaKnown RBP20.63■□□□□ 0.89
DDB1-216ENST00000539739 COL3A1P02461 1466 aaPredicted RBP20.62■□□□□ 0.89
DDB1-216ENST00000539739 BCL9LQ86UU0 1499 aa20.62■□□□□ 0.89
DDB1-216ENST00000539739 ZNF772Q68DY9 489 aaPredicted RBP20.62■□□□□ 0.89
DDB1-216ENST00000539739 U2SURPO15042 1029 aaKnown RBP20.61■□□□□ 0.89
DDB1-216ENST00000539739 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
DDB1-216ENST00000539739 CCDC9Q9Y3X0 531 aaKnown RBP20.61■□□□□ 0.89
DDB1-216ENST00000539739 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
DDB1-216ENST00000539739 EYA1Q99502 592 aa20.6■□□□□ 0.89
DDB1-216ENST00000539739 CRB1P82279 1406 aa20.6■□□□□ 0.89
DDB1-216ENST00000539739 VPS72Q15906 364 aa20.6■□□□□ 0.89
DDB1-216ENST00000539739 NBPF6Q5VWK0 638 aa20.6■□□□□ 0.89
DDB1-216ENST00000539739 NBPF4Q96M43 638 aa20.6■□□□□ 0.89
DDB1-216ENST00000539739 CARD10Q9BWT7 1032 aa20.6■□□□□ 0.89
DDB1-216ENST00000539739 TRPC5Q9UL62 973 aaPredicted RBP20.6■□□□□ 0.89
DDB1-216ENST00000539739 WDR43Q15061 677 aaKnown RBP eCLIP20.59■□□□□ 0.89
DDB1-216ENST00000539739 NRAPQ86VF7 1730 aa20.59■□□□□ 0.89
DDB1-216ENST00000539739 U2AF1L5P0DN76 240 aaPredicted RBP20.57■□□□□ 0.88
DDB1-216ENST00000539739 U2AF1Q01081 240 aaKnown RBP eCLIP20.57■□□□□ 0.882e-7■■□□□ 11.4
DDB1-216ENST00000539739 QTRT2Q9H974 415 aaKnown RBP20.57■□□□□ 0.88
DDB1-216ENST00000539739 USP35Q9P2H5 1018 aa20.57■□□□□ 0.88
DDB1-216ENST00000539739 FAM208AQ9UK61 1670 aaKnown RBP20.57■□□□□ 0.88
DDB1-216ENST00000539739 IGSF1Q8N6C5 1336 aa20.57■□□□□ 0.88
DDB1-216ENST00000539739 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.56■□□□□ 0.88
DDB1-216ENST00000539739 SPATA31A5Q5VU36 1347 aa20.56■□□□□ 0.88
DDB1-216ENST00000539739 SPATA31A7Q8IWB4 1347 aa20.56■□□□□ 0.88
DDB1-216ENST00000539739 SPATA31A1Q5TZJ5 1347 aa20.55■□□□□ 0.88
DDB1-216ENST00000539739 SULT6B1Q6IMI4 303 aa20.55■□□□□ 0.88
DDB1-216ENST00000539739 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
DDB1-216ENST00000539739 USHBP1Q8N6Y0 703 aa20.55■□□□□ 0.88
DDB1-216ENST00000539739 THRAP3Q9Y2W1 955 aaKnown RBP20.55■□□□□ 0.88
DDB1-216ENST00000539739 ATRNO75882 1429 aa20.54■□□□□ 0.88
DDB1-216ENST00000539739 HMOX1P09601 288 aa20.53■□□□□ 0.88
DDB1-216ENST00000539739 PNISRQ8TF01 805 aaKnown RBP20.53■□□□□ 0.88
DDB1-216ENST00000539739 GJD4Q96KN9 370 aaPredicted RBP20.53■□□□□ 0.88
DDB1-216ENST00000539739 PNNQ9H307 717 aaKnown RBP20.53■□□□□ 0.88
DDB1-216ENST00000539739 FCHSD2O94868 740 aa20.52■□□□□ 0.88
DDB1-216ENST00000539739 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
DDB1-216ENST00000539739 NCAPD2Q15021 1401 aa20.51■□□□□ 0.87
DDB1-216ENST00000539739 RGPD2P0DJD1 1756 aa20.5■□□□□ 0.87
DDB1-216ENST00000539739 KDRP35968 1356 aa20.5■□□□□ 0.87
DDB1-216ENST00000539739 AEBP1Q8IUX7 1158 aa20.5■□□□□ 0.87
DDB1-216ENST00000539739 ADAMTS8Q9UP79 889 aa20.5■□□□□ 0.87
DDB1-216ENST00000539739 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
DDB1-216ENST00000539739 IL2RBP14784 551 aa20.49■□□□□ 0.87
DDB1-216ENST00000539739 TATP17735 454 aaPredicted RBP20.49■□□□□ 0.87
DDB1-216ENST00000539739 BARGINQ6ZT62 677 aa20.49■□□□□ 0.87
DDB1-216ENST00000539739 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
DDB1-216ENST00000539739 CDCA7Q9BWT1 371 aaPredicted RBP20.49■□□□□ 0.87
DDB1-216ENST00000539739 RGS17Q9UGC6 210 aaPredicted RBP20.49■□□□□ 0.87
DDB1-216ENST00000539739 NEFMP07197 916 aa20.49■□□□□ 0.87
DDB1-216ENST00000539739 RBM6P78332 1123 aaKnown RBP20.48■□□□□ 0.87
DDB1-216ENST00000539739 RSPH6AQ9H0K4 717 aa20.48■□□□□ 0.87
DDB1-216ENST00000539739 FAM98CQ17RN3 349 aaKnown RBP20.47■□□□□ 0.87
DDB1-216ENST00000539739 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
DDB1-216ENST00000539739 RXRBP28702 533 aa20.46■□□□□ 0.87
DDB1-216ENST00000539739 PRKAR2BP31323 418 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms