RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CENPBP07199 599 aaPredicted RBP21.47■■□□□ 1.03
TRAF3-204ENST00000539721 EIF4A2Q14240 407 aaKnown RBP21.46■■□□□ 1.03
TRAF3-204ENST00000539721 CCDC146Q8IYE0 955 aa21.46■■□□□ 1.03
TRAF3-204ENST00000539721 LRRC59Q96AG4 307 aaKnown RBP21.46■■□□□ 1.03
TRAF3-204ENST00000539721 COL16A1Q07092 1604 aaPredicted RBP21.46■■□□□ 1.03
TRAF3-204ENST00000539721 ARHGEF25Q86VW2 580 aa21.46■■□□□ 1.03
TRAF3-204ENST00000539721 SENP3-EIF4A1A0A087X0R7 540 aa21.45■■□□□ 1.02
TRAF3-204ENST00000539721 ZC3H6P61129 1189 aaKnown RBP21.44■■□□□ 1.02
TRAF3-204ENST00000539721 IP6K1Q92551 441 aa21.44■■□□□ 1.02
TRAF3-204ENST00000539721 ZBED9Q6R2W3 1325 aa21.43■■□□□ 1.02
TRAF3-204ENST00000539721 RGPD1P0DJD0 1748 aa21.43■■□□□ 1.02
TRAF3-204ENST00000539721 HAP1P54257 671 aaPredicted RBP21.42■■□□□ 1.02
TRAF3-204ENST00000539721 COL22A1Q8NFW1 1626 aaPredicted RBP21.42■■□□□ 1.02
TRAF3-204ENST00000539721 RUNDC1Q96C34 613 aa21.41■■□□□ 1.02
TRAF3-204ENST00000539721 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
TRAF3-204ENST00000539721 PNNQ9H307 717 aaKnown RBP21.4■■□□□ 1.02
TRAF3-204ENST00000539721 HMOX1P09601 288 aa21.39■■□□□ 1.01
TRAF3-204ENST00000539721 LTV1Q96GA3 475 aaPredicted RBP21.39■■□□□ 1.01
TRAF3-204ENST00000539721 CPDO75976 1380 aa21.39■■□□□ 1.01
TRAF3-204ENST00000539721 COL18A1P39060 1754 aa21.39■■□□□ 1.01
TRAF3-204ENST00000539721 ABCC6O95255 1503 aa21.39■■□□□ 1.01
TRAF3-204ENST00000539721 FCHSD2O94868 740 aa21.38■■□□□ 1.01
TRAF3-204ENST00000539721 SALL2Q9Y467 1007 aaPredicted RBP21.38■■□□□ 1.01
TRAF3-204ENST00000539721 KIAA0232Q92628 1395 aa21.38■■□□□ 1.01
TRAF3-204ENST00000539721 APAF1O14727 1248 aa21.38■■□□□ 1.01
TRAF3-204ENST00000539721 RSPH6AQ9H0K4 717 aa21.38■■□□□ 1.01
TRAF3-204ENST00000539721 MAPK8IP3Q9UPT6 1336 aa21.37■■□□□ 1.01
TRAF3-204ENST00000539721 PLEKHF1Q96S99 279 aa21.36■■□□□ 1.01
TRAF3-204ENST00000539721 PRKAR2BP31323 418 aa21.36■■□□□ 1.01
TRAF3-204ENST00000539721 SULT6B1Q6IMI4 303 aa21.35■■□□□ 1.01
TRAF3-204ENST00000539721 EYA1Q99502 592 aa21.35■■□□□ 1.01
TRAF3-204ENST00000539721 RGPD2P0DJD1 1756 aa21.35■■□□□ 1.01
TRAF3-204ENST00000539721 IGSF1Q8N6C5 1336 aa21.34■■□□□ 1.01
TRAF3-204ENST00000539721 NEFMP07197 916 aa21.34■■□□□ 1.01
TRAF3-204ENST00000539721 CHRNA2Q15822 529 aa21.34■■□□□ 1.01
TRAF3-204ENST00000539721 TCP11L2Q8N4U5 519 aa21.34■■□□□ 1.01
TRAF3-204ENST00000539721 AXIN2Q9Y2T1 843 aa21.34■■□□□ 1.01
TRAF3-204ENST00000539721 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
TRAF3-204ENST00000539721 PRDM11Q9NQV5 511 aa21.33■■□□□ 1.01
TRAF3-204ENST00000539721 AEBP1Q8IUX7 1158 aa21.33■■□□□ 1
TRAF3-204ENST00000539721 LMO7Q8WWI1 1683 aa21.31■■□□□ 1
TRAF3-204ENST00000539721 NGEFQ8N5V2 710 aa21.31■■□□□ 1
TRAF3-204ENST00000539721 FAM208AQ9UK61 1670 aaKnown RBP21.3■■□□□ 1
TRAF3-204ENST00000539721 KDRP35968 1356 aa21.3■■□□□ 1
TRAF3-204ENST00000539721 RRP7AQ9Y3A4 280 aaKnown RBP21.3■■□□□ 1
TRAF3-204ENST00000539721 ERBB3P21860 1342 aa21.3■■□□□ 1
TRAF3-204ENST00000539721 CAMTA1Q9Y6Y1 1673 aa21.29■■□□□ 1
TRAF3-204ENST00000539721 NEUROD2Q15784 382 aa21.29■■□□□ 1
TRAF3-204ENST00000539721 NBPF6Q5VWK0 638 aa21.28■■□□□ 1
TRAF3-204ENST00000539721 NBPF4Q96M43 638 aa21.28■■□□□ 1
TRAF3-204ENST00000539721 USHBP1Q8N6Y0 703 aa21.28■■□□□ 1
TRAF3-204ENST00000539721 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
TRAF3-204ENST00000539721 COL14A1Q05707 1796 aaKnown RBP21.27■■□□□ 1
TRAF3-204ENST00000539721 TMPOP42166 694 aaKnown RBP21.27■■□□□ 1
TRAF3-204ENST00000539721 JCADQ9P266 1359 aa21.26■□□□□ 0.99
TRAF3-204ENST00000539721 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
TRAF3-204ENST00000539721 PDE3BQ13370 1112 aa21.25■□□□□ 0.99
TRAF3-204ENST00000539721 NCBP3Q53F19 620 aaKnown RBP21.25■□□□□ 0.99
TRAF3-204ENST00000539721 DLG5Q8TDM6 1919 aa21.24■□□□□ 0.99
TRAF3-204ENST00000539721 ZNF521Q96K83 1311 aa21.24■□□□□ 0.99
TRAF3-204ENST00000539721 FAM83GA6ND36 823 aa21.24■□□□□ 0.99
TRAF3-204ENST00000539721 NFE2L2Q16236 605 aa21.24■□□□□ 0.99
TRAF3-204ENST00000539721 COL5A2P05997 1499 aaPredicted RBP21.24■□□□□ 0.99
TRAF3-204ENST00000539721 NCAPD2Q15021 1401 aa21.23■□□□□ 0.99
TRAF3-204ENST00000539721 RIPK4P57078 832 aa21.23■□□□□ 0.99
TRAF3-204ENST00000539721 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
TRAF3-204ENST00000539721 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
TRAF3-204ENST00000539721 CCDC27Q2M243 656 aa21.23■□□□□ 0.99
TRAF3-204ENST00000539721 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
TRAF3-204ENST00000539721 NLRP2Q9NX02 1062 aa21.23■□□□□ 0.99
TRAF3-204ENST00000539721 WWC1Q8IX03 1113 aa21.22■□□□□ 0.99
TRAF3-204ENST00000539721 HSPA1LP34931 641 aa21.21■□□□□ 0.99
TRAF3-204ENST00000539721 ADAMTS2O95450 1211 aa21.2■□□□□ 0.99
TRAF3-204ENST00000539721 PHF23Q9BUL5 403 aaPredicted RBP21.2■□□□□ 0.99
TRAF3-204ENST00000539721 PLCH1Q4KWH8 1693 aa21.2■□□□□ 0.98
TRAF3-204ENST00000539721 WDR17Q8IZU2 1322 aa21.2■□□□□ 0.98
TRAF3-204ENST00000539721 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
TRAF3-204ENST00000539721 CDCA7LQ96GN5 454 aa21.19■□□□□ 0.98
TRAF3-204ENST00000539721 EVA1CP58658 441 aa21.18■□□□□ 0.98
TRAF3-204ENST00000539721 STRN4Q9NRL3 753 aa21.18■□□□□ 0.98
TRAF3-204ENST00000539721 BTG4Q9NY30 223 aa21.18■□□□□ 0.98
TRAF3-204ENST00000539721 TRIM35Q9UPQ4 493 aa21.18■□□□□ 0.98
TRAF3-204ENST00000539721 TOM1L2Q6ZVM7 507 aa21.17■□□□□ 0.98
TRAF3-204ENST00000539721 WDR63Q8IWG1 891 aa21.17■□□□□ 0.98
TRAF3-204ENST00000539721 GAS2L2Q8NHY3 880 aa21.17■□□□□ 0.98
TRAF3-204ENST00000539721 LMOD3Q0VAK6 560 aa21.16■□□□□ 0.98
TRAF3-204ENST00000539721 MTHFSDQ2M296 383 aaKnown RBP21.16■□□□□ 0.98
TRAF3-204ENST00000539721 SPATA31A6Q5VVP1 1343 aa21.16■□□□□ 0.98
TRAF3-204ENST00000539721 NRAPQ86VF7 1730 aa21.14■□□□□ 0.97
TRAF3-204ENST00000539721 SLFN5Q08AF3 891 aa21.13■□□□□ 0.97
TRAF3-204ENST00000539721 LARP1Q6PKG0 1096 aaKnown RBP21.13■□□□□ 0.97
TRAF3-204ENST00000539721 RAPGEF4Q8WZA2 1011 aa21.13■□□□□ 0.97
TRAF3-204ENST00000539721 NWD2Q9ULI1 1742 aa21.13■□□□□ 0.97
TRAF3-204ENST00000539721 E9PSI1 815 aa21.13■□□□□ 0.97
TRAF3-204ENST00000539721 CRB1P82279 1406 aa21.12■□□□□ 0.97
TRAF3-204ENST00000539721 TATP17735 454 aaPredicted RBP21.12■□□□□ 0.97
TRAF3-204ENST00000539721 PLEKHO1Q53GL0 409 aaPredicted RBP21.12■□□□□ 0.97
TRAF3-204ENST00000539721 CARD10Q9BWT7 1032 aa21.12■□□□□ 0.97
TRAF3-204ENST00000539721 SPINK5Q9NQ38 1064 aaPredicted RBP21.12■□□□□ 0.97
TRAF3-204ENST00000539721 PARP4Q9UKK3 1724 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms