RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 SPDYE5A6NIY4 337 aa9.09□□□□□ -0.95
LDHC-206ENST00000539369 RNF225M0QZC1 329 aaPredicted RBP9.09□□□□□ -0.95
LDHC-206ENST00000539369 RNFT1Q5M7Z0 435 aa9.09□□□□□ -0.95
LDHC-206ENST00000539369 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
LDHC-206ENST00000539369 COL25A1Q9BXS0 654 aaPredicted RBP9.09□□□□□ -0.95
LDHC-206ENST00000539369 CFAP99D6REC4 459 aa9.08□□□□□ -0.96
LDHC-206ENST00000539369 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
LDHC-206ENST00000539369 PTSQ03393 145 aa9.07□□□□□ -0.96
LDHC-206ENST00000539369 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
LDHC-206ENST00000539369 TRIM66O15016 1216 aa9.06□□□□□ -0.96
LDHC-206ENST00000539369 UPP2O95045 317 aa9.06□□□□□ -0.96
LDHC-206ENST00000539369 GPAT2Q6NUI2 795 aa9.06□□□□□ -0.96
LDHC-206ENST00000539369 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
LDHC-206ENST00000539369 SPTLC1O15269 473 aa9.05□□□□□ -0.96
LDHC-206ENST00000539369 ARHGEF15O94989 841 aa9.05□□□□□ -0.96
LDHC-206ENST00000539369 PARP9Q8IXQ6 854 aa9.05□□□□□ -0.96
LDHC-206ENST00000539369 AK7Q96M32 723 aa9.05□□□□□ -0.96
LDHC-206ENST00000539369 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
LDHC-206ENST00000539369 DNMT3AQ9Y6K1 912 aaPredicted RBP9.05□□□□□ -0.96
LDHC-206ENST00000539369 IRS1P35568 1242 aa9.04□□□□□ -0.96
LDHC-206ENST00000539369 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.04□□□□□ -0.96
LDHC-206ENST00000539369 SVOPQ8N4V2 548 aa9.04□□□□□ -0.96
LDHC-206ENST00000539369 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
LDHC-206ENST00000539369 C1QTNF2Q9BXJ5 285 aa9.04□□□□□ -0.96
LDHC-206ENST00000539369 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
LDHC-206ENST00000539369 SLURP2P0DP57 97 aa9.03□□□□□ -0.96
LDHC-206ENST00000539369 FSHRP23945 695 aa9.03□□□□□ -0.96
LDHC-206ENST00000539369 TOP2AP11388 1531 aaKnown RBP9.02□□□□□ -0.97
LDHC-206ENST00000539369 AGERQ15109 404 aa9.02□□□□□ -0.97
LDHC-206ENST00000539369 RSBN1LQ6PCB5 846 aaPredicted RBP9.02□□□□□ -0.97
LDHC-206ENST00000539369 TSEN34Q9BSV6 310 aaKnown RBP9.02□□□□□ -0.97
LDHC-206ENST00000539369 RSF1Q96T23 1441 aaPredicted RBP9.02□□□□□ -0.97
LDHC-206ENST00000539369 EIF4G3O43432 1585 aaKnown RBP9.02□□□□□ -0.97
LDHC-206ENST00000539369 TOPBP1Q92547 1522 aa9.01□□□□□ -0.97
LDHC-206ENST00000539369 FIGNL2A6NMB9 653 aa9.01□□□□□ -0.97
LDHC-206ENST00000539369 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
LDHC-206ENST00000539369 BPHLQ86WA6 291 aaPredicted RBP9.01□□□□□ -0.97
LDHC-206ENST00000539369 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
LDHC-206ENST00000539369 IGHA1P01876 353 aa9□□□□□ -0.97
LDHC-206ENST00000539369 HRCP23327 699 aa9□□□□□ -0.97
LDHC-206ENST00000539369 GJA5P36382 358 aa9□□□□□ -0.97
LDHC-206ENST00000539369 SH3RF1Q7Z6J0 888 aa9□□□□□ -0.97
LDHC-206ENST00000539369 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
LDHC-206ENST00000539369 AQRO60306 1485 aaKnown RBP eCLIP9□□□□□ -0.97
LDHC-206ENST00000539369 XP32Q5T750 250 aa8.99□□□□□ -0.97
LDHC-206ENST00000539369 MAP4K5Q9Y4K4 846 aa8.99□□□□□ -0.97
LDHC-206ENST00000539369 SLC35F4A4IF30 521 aa8.98□□□□□ -0.97
LDHC-206ENST00000539369 DIXDC1Q155Q3 683 aa8.98□□□□□ -0.97
LDHC-206ENST00000539369 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
LDHC-206ENST00000539369 CHD1O14646 1710 aa8.97□□□□□ -0.97
LDHC-206ENST00000539369 PDE4DQ08499 809 aa8.97□□□□□ -0.97
LDHC-206ENST00000539369 CBLBQ13191 982 aa8.97□□□□□ -0.97
LDHC-206ENST00000539369 VWA5B2Q8N398 1253 aa8.97□□□□□ -0.97
LDHC-206ENST00000539369 EMILIN1Q9Y6C2 1016 aa8.97□□□□□ -0.97
LDHC-206ENST00000539369 SPINT1O43278 529 aa8.96□□□□□ -0.98
LDHC-206ENST00000539369 ITGA6P23229 1130 aa8.96□□□□□ -0.98
LDHC-206ENST00000539369 KANK3Q6NY19 840 aa8.96□□□□□ -0.98
LDHC-206ENST00000539369 VASH1Q7L8A9 365 aaPredicted RBP8.96□□□□□ -0.98
LDHC-206ENST00000539369 TRMT44Q8IYL2 757 aaKnown RBP8.96□□□□□ -0.98
LDHC-206ENST00000539369 CCDC116Q8IYX3 515 aa8.96□□□□□ -0.98
LDHC-206ENST00000539369 CABLES1Q8TDN4 633 aa8.96□□□□□ -0.98
LDHC-206ENST00000539369 PRDM2Q13029 1718 aa8.95□□□□□ -0.98
LDHC-206ENST00000539369 Q6ZVU0 165 aa8.95□□□□□ -0.98
LDHC-206ENST00000539369 SH3BP5LQ7L8J4 393 aa8.95□□□□□ -0.98
LDHC-206ENST00000539369 CCDC88BA6NC98 1476 aa8.95□□□□□ -0.98
LDHC-206ENST00000539369 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
LDHC-206ENST00000539369 FOXK2Q01167 660 aa8.94□□□□□ -0.98
LDHC-206ENST00000539369 ZBTB3Q9H5J0 574 aa8.94□□□□□ -0.98
LDHC-206ENST00000539369 DNMBPQ6XZF7 1577 aa8.94□□□□□ -0.98
LDHC-206ENST00000539369 MARSP56192 900 aaKnown RBP8.93□□□□□ -0.98
LDHC-206ENST00000539369 ABCC8Q09428 1581 aa8.93□□□□□ -0.98
LDHC-206ENST00000539369 CDC14CA4D256 554 aa8.92□□□□□ -0.98
LDHC-206ENST00000539369 PPP1R26Q5T8A7 1209 aaPredicted RBP8.92□□□□□ -0.98
LDHC-206ENST00000539369 LYPD4Q6UWN0 246 aa8.92□□□□□ -0.98
LDHC-206ENST00000539369 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
LDHC-206ENST00000539369 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
LDHC-206ENST00000539369 POLA1P09884 1462 aaPredicted RBP8.91□□□□□ -0.98
LDHC-206ENST00000539369 SENP3-EIF4A1A0A087X0R7 540 aa8.91□□□□□ -0.98
LDHC-206ENST00000539369 ADAMTS2O95450 1211 aa8.91□□□□□ -0.98
LDHC-206ENST00000539369 ITGB2P05107 769 aa8.91□□□□□ -0.98
LDHC-206ENST00000539369 PRPF38BQ5VTL8 546 aaKnown RBP8.91□□□□□ -0.98
LDHC-206ENST00000539369 SV2AQ7L0J3 742 aa8.91□□□□□ -0.98
LDHC-206ENST00000539369 SCARF2Q96GP6 870 aaPredicted RBP8.91□□□□□ -0.98
LDHC-206ENST00000539369 TDRD9Q8NDG6 1382 aaKnown RBP8.9□□□□□ -0.98
LDHC-206ENST00000539369 MAGEB6P1A0A0J9YX57 407 aa8.9□□□□□ -0.98
LDHC-206ENST00000539369 CTSOP43234 321 aaPredicted RBP8.9□□□□□ -0.98
LDHC-206ENST00000539369 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
LDHC-206ENST00000539369 RAD54L2Q9Y4B4 1467 aa8.89□□□□□ -0.99
LDHC-206ENST00000539369 ADAM23O75077 832 aa8.89□□□□□ -0.99
LDHC-206ENST00000539369 MYSM1Q5VVJ2 828 aa8.89□□□□□ -0.99
LDHC-206ENST00000539369 SNAPC4Q5SXM2 1469 aa8.89□□□□□ -0.99
LDHC-206ENST00000539369 QPCTQ16769 361 aa8.88□□□□□ -0.99
LDHC-206ENST00000539369 ERFEQ4G0M1 354 aa8.88□□□□□ -0.99
LDHC-206ENST00000539369 ARMC2Q8NEN0 867 aa8.88□□□□□ -0.99
LDHC-206ENST00000539369 AGBL1Q96MI9 1066 aa8.88□□□□□ -0.99
LDHC-206ENST00000539369 CARD14Q9BXL6 1004 aa8.88□□□□□ -0.99
LDHC-206ENST00000539369 LIMD1Q9UGP4 676 aa8.88□□□□□ -0.99
LDHC-206ENST00000539369 GAS6Q14393 721 aa8.87□□□□□ -0.99
LDHC-206ENST00000539369 PLA2G4EQ3MJ16 856 aa8.87□□□□□ -0.99
LDHC-206ENST00000539369 NBPF14Q5TI25 921 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms