RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 COG3Q96JB2 828 aa20.76■□□□□ 0.91
PRPF19-203ENST00000539180 SPATA31A5Q5VU36 1347 aa20.76■□□□□ 0.91
PRPF19-203ENST00000539180 SPATA31A7Q8IWB4 1347 aa20.76■□□□□ 0.91
PRPF19-203ENST00000539180 SOX12O15370 315 aa20.75■□□□□ 0.91
PRPF19-203ENST00000539180 GGNBP2Q9H3C7 697 aa20.75■□□□□ 0.91
PRPF19-203ENST00000539180 PANK3Q9H999 370 aa20.74■□□□□ 0.91
PRPF19-203ENST00000539180 PARP4Q9UKK3 1724 aaKnown RBP20.74■□□□□ 0.91
PRPF19-203ENST00000539180 CGNL1Q0VF96 1302 aa20.74■□□□□ 0.91
PRPF19-203ENST00000539180 NSD2O96028 1365 aa20.73■□□□□ 0.91
PRPF19-203ENST00000539180 BLMP54132 1417 aaPredicted RBP20.73■□□□□ 0.91
PRPF19-203ENST00000539180 CRB1P82279 1406 aa20.73■□□□□ 0.91
PRPF19-203ENST00000539180 AXIN2Q9Y2T1 843 aa20.73■□□□□ 0.91
PRPF19-203ENST00000539180 RTL1A6NKG5 1358 aa20.72■□□□□ 0.91
PRPF19-203ENST00000539180 SPATA31A1Q5TZJ5 1347 aa20.72■□□□□ 0.91
PRPF19-203ENST00000539180 LRRC37A3O60309 1634 aa20.71■□□□□ 0.91
PRPF19-203ENST00000539180 SOCS7O14512 581 aa20.71■□□□□ 0.91
PRPF19-203ENST00000539180 STRN4Q9NRL3 753 aa20.71■□□□□ 0.91
PRPF19-203ENST00000539180 MAP2P11137 1827 aaKnown RBP20.7■□□□□ 0.9
PRPF19-203ENST00000539180 ZBTB7CA1YPR0 619 aa20.7■□□□□ 0.9
PRPF19-203ENST00000539180 ONECUT3O60422 494 aaPredicted RBP20.7■□□□□ 0.9
PRPF19-203ENST00000539180 LARP1Q6PKG0 1096 aaKnown RBP20.7■□□□□ 0.9
PRPF19-203ENST00000539180 MAP3K19Q56UN5 1328 aa20.7■□□□□ 0.9
PRPF19-203ENST00000539180 WDR17Q8IZU2 1322 aa20.7■□□□□ 0.9
PRPF19-203ENST00000539180 ERBB3P21860 1342 aa20.69■□□□□ 0.9
PRPF19-203ENST00000539180 CCDC9Q9Y3X0 531 aaKnown RBP20.68■□□□□ 0.9
PRPF19-203ENST00000539180 KIF24Q5T7B8 1368 aa20.68■□□□□ 0.9
PRPF19-203ENST00000539180 RGPD2P0DJD1 1756 aa20.67■□□□□ 0.9
PRPF19-203ENST00000539180 ZEB1P37275 1124 aaPredicted RBP20.67■□□□□ 0.9
PRPF19-203ENST00000539180 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
PRPF19-203ENST00000539180 FBLN1P23142 703 aa20.66■□□□□ 0.9
PRPF19-203ENST00000539180 DISP2A7MBM2 1401 aa20.66■□□□□ 0.9
PRPF19-203ENST00000539180 PER1O15534 1290 aaPredicted RBP20.64■□□□□ 0.89
PRPF19-203ENST00000539180 EVA1CP58658 441 aa20.64■□□□□ 0.89
PRPF19-203ENST00000539180 FAM98CQ17RN3 349 aaKnown RBP20.64■□□□□ 0.89
PRPF19-203ENST00000539180 AMER1Q5JTC6 1135 aaPredicted RBP20.64■□□□□ 0.89
PRPF19-203ENST00000539180 BARGINQ6ZT62 677 aa20.64■□□□□ 0.89
PRPF19-203ENST00000539180 IP6K1Q92551 441 aa20.64■□□□□ 0.89
PRPF19-203ENST00000539180 FLT4P35916 1363 aa20.63■□□□□ 0.89
PRPF19-203ENST00000539180 HOXC9P31274 260 aa20.63■□□□□ 0.89
PRPF19-203ENST00000539180 RRS1Q15050 365 aaKnown RBP20.63■□□□□ 0.89
PRPF19-203ENST00000539180 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
PRPF19-203ENST00000539180 THRAP3Q9Y2W1 955 aaKnown RBP20.63■□□□□ 0.89
PRPF19-203ENST00000539180 NPC1L1Q9UHC9 1359 aa20.62■□□□□ 0.89
PRPF19-203ENST00000539180 TCP11L2Q8N4U5 519 aa20.61■□□□□ 0.89
PRPF19-203ENST00000539180 INSRP06213 1382 aa20.6■□□□□ 0.89
PRPF19-203ENST00000539180 ANKRD24Q8TF21 1146 aa20.6■□□□□ 0.89
PRPF19-203ENST00000539180 CARD10Q9BWT7 1032 aa20.6■□□□□ 0.89
PRPF19-203ENST00000539180 KNSTRNQ9Y448 316 aa20.6■□□□□ 0.89
PRPF19-203ENST00000539180 TOM1L2Q6ZVM7 507 aa20.59■□□□□ 0.89
PRPF19-203ENST00000539180 USP35Q9P2H5 1018 aa20.59■□□□□ 0.89
PRPF19-203ENST00000539180 SHANK3Q9BYB0 1731 aa20.58■□□□□ 0.89
PRPF19-203ENST00000539180 EMILIN1Q9Y6C2 1016 aa20.58■□□□□ 0.89
PRPF19-203ENST00000539180 NCAPD2Q15021 1401 aa20.58■□□□□ 0.88
PRPF19-203ENST00000539180 EP400Q96L91 3159 aa20.57■□□□□ 0.88
PRPF19-203ENST00000539180 AMPHP49418 695 aa20.57■□□□□ 0.88
PRPF19-203ENST00000539180 TNS1Q9HBL0 1735 aaKnown RBP20.57■□□□□ 0.88
PRPF19-203ENST00000539180 TNS2Q63HR2 1409 aa20.56■□□□□ 0.88
PRPF19-203ENST00000539180 CSB-PGBD3P0DP91 1061 aa20.56■□□□□ 0.88
PRPF19-203ENST00000539180 RGPD1P0DJD0 1748 aa20.56■□□□□ 0.88
PRPF19-203ENST00000539180 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
PRPF19-203ENST00000539180 KRT27Q7Z3Y8 459 aa20.54■□□□□ 0.88
PRPF19-203ENST00000539180 A0A0G2JS52 829 aa20.53■□□□□ 0.88
PRPF19-203ENST00000539180 MYT1Q01538 1121 aa20.53■□□□□ 0.88
PRPF19-203ENST00000539180 HSP90AB2PQ58FF8 381 aa20.53■□□□□ 0.88
PRPF19-203ENST00000539180 UPF1Q92900 1129 aaKnown RBP eCLIP20.53■□□□□ 0.88
PRPF19-203ENST00000539180 MORC1Q86VD1 984 aa20.52■□□□□ 0.88
PRPF19-203ENST00000539180 SBF2Q86WG5 1849 aa20.52■□□□□ 0.88
PRPF19-203ENST00000539180 MEGF6O75095 1541 aa20.52■□□□□ 0.87
PRPF19-203ENST00000539180 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
PRPF19-203ENST00000539180 CDCA7Q9BWT1 371 aaPredicted RBP20.51■□□□□ 0.87
PRPF19-203ENST00000539180 NLRP2Q9NX02 1062 aa20.51■□□□□ 0.87
PRPF19-203ENST00000539180 TNNT2P45379 298 aaPredicted RBP20.5■□□□□ 0.87
PRPF19-203ENST00000539180 LTV1Q96GA3 475 aaPredicted RBP20.5■□□□□ 0.87
PRPF19-203ENST00000539180 OVOS2A0A0G2JMS6 1433 aa20.48■□□□□ 0.87
PRPF19-203ENST00000539180 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
PRPF19-203ENST00000539180 BCL9O00512 1426 aa20.47■□□□□ 0.87
PRPF19-203ENST00000539180 CC2D1BQ5T0F9 858 aaKnown RBP20.47■□□□□ 0.87
PRPF19-203ENST00000539180 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
PRPF19-203ENST00000539180 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
PRPF19-203ENST00000539180 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
PRPF19-203ENST00000539180 IL2RBP14784 551 aa20.45■□□□□ 0.86
PRPF19-203ENST00000539180 DDB1Q16531 1140 aa20.45■□□□□ 0.86
PRPF19-203ENST00000539180 PPM1GO15355 546 aaPredicted RBP20.44■□□□□ 0.86
PRPF19-203ENST00000539180 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
PRPF19-203ENST00000539180 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
PRPF19-203ENST00000539180 RGPD3A6NKT7 1758 aaPredicted RBP20.43■□□□□ 0.86
PRPF19-203ENST00000539180 RGPD4Q7Z3J3 1758 aa20.43■□□□□ 0.86
PRPF19-203ENST00000539180 DOT1LQ8TEK3 1739 aa20.42■□□□□ 0.86
PRPF19-203ENST00000539180 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
PRPF19-203ENST00000539180 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
PRPF19-203ENST00000539180 IGSF1Q8N6C5 1336 aa20.41■□□□□ 0.86
PRPF19-203ENST00000539180 PARD3Q8TEW0 1356 aa20.41■□□□□ 0.86
PRPF19-203ENST00000539180 PLEKHG2Q9H7P9 1386 aa20.41■□□□□ 0.86
PRPF19-203ENST00000539180 MARCH10Q8NA82 808 aaPredicted RBP20.4■□□□□ 0.86
PRPF19-203ENST00000539180 RREB1Q92766 1687 aa20.39■□□□□ 0.86
PRPF19-203ENST00000539180 FAM196AQ6ZSG2 479 aa20.39■□□□□ 0.85
PRPF19-203ENST00000539180 CCDC125Q86Z20 511 aa20.39■□□□□ 0.85
PRPF19-203ENST00000539180 EYA1Q99502 592 aa20.39■□□□□ 0.85
PRPF19-203ENST00000539180 TOGARAM1Q9Y4F4 1720 aa20.38■□□□□ 0.85
PRPF19-203ENST00000539180 KDRP35968 1356 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms