RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 MRPL14Q6P1L8 145 aaKnown RBP10.42□□□□□ -0.74
SSPN-206ENST00000539019 ZFP42Q96MM3 310 aa10.42□□□□□ -0.74
SSPN-206ENST00000539019 SLC10A4Q96EP9 437 aa10.41□□□□□ -0.74
SSPN-206ENST00000539019 CCDC116Q8IYX3 515 aa10.4□□□□□ -0.74
SSPN-206ENST00000539019 BANK1Q8NDB2 785 aa10.4□□□□□ -0.74
SSPN-206ENST00000539019 KCTD15Q96SI1 283 aaPredicted RBP10.4□□□□□ -0.74
SSPN-206ENST00000539019 PURBQ96QR8 312 aaKnown RBP10.39□□□□□ -0.75
SSPN-206ENST00000539019 CDV3Q9UKY7 258 aaKnown RBP10.39□□□□□ -0.75
SSPN-206ENST00000539019 SCARF1Q14162 830 aa10.39□□□□□ -0.75
SSPN-206ENST00000539019 TREML4Q6UXN2 200 aa10.39□□□□□ -0.75
SSPN-206ENST00000539019 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
SSPN-206ENST00000539019 PPP1R26Q5T8A7 1209 aaPredicted RBP10.38□□□□□ -0.75
SSPN-206ENST00000539019 SNRKQ9NRH2 765 aa10.38□□□□□ -0.75
SSPN-206ENST00000539019 DZIP3Q86Y13 1208 aaKnown RBP10.36□□□□□ -0.75
SSPN-206ENST00000539019 MTMR14Q8NCE2 650 aa10.36□□□□□ -0.75
SSPN-206ENST00000539019 INTS6LQ5JSJ4 861 aaKnown RBP10.35□□□□□ -0.75
SSPN-206ENST00000539019 C6orf118Q5T5N4 469 aa10.35□□□□□ -0.75
SSPN-206ENST00000539019 LCE2AQ5TA79 106 aaPredicted RBP10.35□□□□□ -0.75
SSPN-206ENST00000539019 MEIOBQ8N635 442 aa10.35□□□□□ -0.75
SSPN-206ENST00000539019 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
SSPN-206ENST00000539019 NFX1Q12986 1120 aaKnown RBP10.34□□□□□ -0.75
SSPN-206ENST00000539019 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
SSPN-206ENST00000539019 ABCC9O60706 1549 aa10.33□□□□□ -0.76
SSPN-206ENST00000539019 TERTO14746 1132 aaKnown RBP10.33□□□□□ -0.76
SSPN-206ENST00000539019 WFS1O76024 890 aa10.33□□□□□ -0.76
SSPN-206ENST00000539019 CBLBQ13191 982 aa10.33□□□□□ -0.76
SSPN-206ENST00000539019 LINC00528Q8N1L1 170 aa10.33□□□□□ -0.76
SSPN-206ENST00000539019 UPP2O95045 317 aa10.32□□□□□ -0.76
SSPN-206ENST00000539019 FBXO45P0C2W1 286 aa10.32□□□□□ -0.76
SSPN-206ENST00000539019 BMP2P12643 396 aa10.32□□□□□ -0.76
SSPN-206ENST00000539019 DHX9Q08211 1270 aaKnown RBP10.32□□□□□ -0.76
SSPN-206ENST00000539019 NBPF20Q3BBV1 942 aa10.32□□□□□ -0.76
SSPN-206ENST00000539019 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
SSPN-206ENST00000539019 SOCS7O14512 581 aa10.31□□□□□ -0.76
SSPN-206ENST00000539019 RAB15P59190 212 aa10.31□□□□□ -0.76
SSPN-206ENST00000539019 GPR37L1O60883 481 aa10.3□□□□□ -0.76
SSPN-206ENST00000539019 Q6ZVU0 165 aa10.3□□□□□ -0.76
SSPN-206ENST00000539019 TMPRSS4Q9NRS4 437 aa10.3□□□□□ -0.76
SSPN-206ENST00000539019 ESPNB1AK53 854 aa10.29□□□□□ -0.76
SSPN-206ENST00000539019 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
SSPN-206ENST00000539019 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
SSPN-206ENST00000539019 PCDHB9Q9Y5E1 797 aa10.29□□□□□ -0.76
SSPN-206ENST00000539019 NDUFB9Q9Y6M9 179 aa10.29□□□□□ -0.76
SSPN-206ENST00000539019 ERVH48-1M5A8F1 160 aa10.27□□□□□ -0.76
SSPN-206ENST00000539019 NR1H3Q13133 447 aa10.27□□□□□ -0.76
SSPN-206ENST00000539019 APBB1O00213 710 aa10.26□□□□□ -0.77
SSPN-206ENST00000539019 LCE2CQ5TA81 110 aa10.26□□□□□ -0.77
SSPN-206ENST00000539019 SOS2Q07890 1332 aaPredicted RBP10.26□□□□□ -0.77
SSPN-206ENST00000539019 MAN1A2O60476 641 aa10.26□□□□□ -0.77
SSPN-206ENST00000539019 GIGYF1O75420 1035 aaPredicted RBP10.26□□□□□ -0.77
SSPN-206ENST00000539019 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
SSPN-206ENST00000539019 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
SSPN-206ENST00000539019 VEGFBP49765 207 aa10.25□□□□□ -0.77
SSPN-206ENST00000539019 LILRA1O75019 489 aa10.24□□□□□ -0.77
SSPN-206ENST00000539019 ADD1P35611 737 aaKnown RBP10.24□□□□□ -0.77
SSPN-206ENST00000539019 SEPT12Q8IYM1 358 aa10.24□□□□□ -0.77
SSPN-206ENST00000539019 SLC16A10Q8TF71 515 aa10.23□□□□□ -0.77
SSPN-206ENST00000539019 DNMT3LQ9UJW3 386 aa10.23□□□□□ -0.77
SSPN-206ENST00000539019 TBC1D2BQ9UPU7 963 aa10.23□□□□□ -0.77
SSPN-206ENST00000539019 SPINT1O43278 529 aa10.22□□□□□ -0.77
SSPN-206ENST00000539019 RELBQ01201 579 aa10.22□□□□□ -0.77
SSPN-206ENST00000539019 NPAS3Q8IXF0 933 aa10.22□□□□□ -0.77
SSPN-206ENST00000539019 FIGNL2A6NMB9 653 aa10.21□□□□□ -0.78
SSPN-206ENST00000539019 TTLL8A6PVC2 850 aa10.21□□□□□ -0.78
SSPN-206ENST00000539019 H3BM21 787 aa10.21□□□□□ -0.78
SSPN-206ENST00000539019 MCCD1P59942 119 aaPredicted RBP10.21□□□□□ -0.78
SSPN-206ENST00000539019 ZNF395Q9H8N7 513 aaPredicted RBP10.21□□□□□ -0.78
SSPN-206ENST00000539019 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.78
SSPN-206ENST00000539019 CYLDQ9NQC7 956 aa10.2□□□□□ -0.78
SSPN-206ENST00000539019 KDF1Q8NAX2 398 aaPredicted RBP10.19□□□□□ -0.78
SSPN-206ENST00000539019 PRM3Q9NNZ6 103 aa10.19□□□□□ -0.78
SSPN-206ENST00000539019 ADH1AP07327 375 aa10.18□□□□□ -0.78
SSPN-206ENST00000539019 INSM2Q96T92 566 aaPredicted RBP10.18□□□□□ -0.78
SSPN-206ENST00000539019 WIPF1O43516 503 aa10.17□□□□□ -0.78
SSPN-206ENST00000539019 CTSOP43234 321 aaPredicted RBP10.17□□□□□ -0.78
SSPN-206ENST00000539019 IRF5Q13568 498 aa10.17□□□□□ -0.78
SSPN-206ENST00000539019 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.17□□□□□ -0.78
SSPN-206ENST00000539019 RNF20Q5VTR2 975 aa10.17□□□□□ -0.78
SSPN-206ENST00000539019 PTGIRP43119 386 aa10.16□□□□□ -0.78
SSPN-206ENST00000539019 ZNF592Q92610 1267 aa10.16□□□□□ -0.78
SSPN-206ENST00000539019 IRF7Q92985 503 aa10.16□□□□□ -0.78
SSPN-206ENST00000539019 ZCCHC6Q5VYS8 1495 aaKnown RBP10.16□□□□□ -0.78
SSPN-206ENST00000539019 ERBB4Q15303 1308 aa10.15□□□□□ -0.78
SSPN-206ENST00000539019 CCDC125Q86Z20 511 aa10.15□□□□□ -0.78
SSPN-206ENST00000539019 GDPD2Q9HCC8 539 aa10.15□□□□□ -0.78
SSPN-206ENST00000539019 POLMQ9NP87 494 aaPredicted RBP10.15□□□□□ -0.78
SSPN-206ENST00000539019 PPFIA3O75145 1194 aa10.14□□□□□ -0.79
SSPN-206ENST00000539019 TRIM52Q96A61 297 aa10.14□□□□□ -0.79
SSPN-206ENST00000539019 CEP126Q9P2H0 1117 aa10.14□□□□□ -0.79
SSPN-206ENST00000539019 GMPRP36959 345 aa10.14□□□□□ -0.79
SSPN-206ENST00000539019 ABL2P42684 1182 aa10.13□□□□□ -0.79
SSPN-206ENST00000539019 ERVK-9P63128 1117 aa10.13□□□□□ -0.79
SSPN-206ENST00000539019 PTSQ03393 145 aa10.13□□□□□ -0.79
SSPN-206ENST00000539019 MCM6Q14566 821 aa10.13□□□□□ -0.79
SSPN-206ENST00000539019 CC2D2BQ6DHV5 1058 aa10.13□□□□□ -0.79
SSPN-206ENST00000539019 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
SSPN-206ENST00000539019 SCTRP47872 440 aa10.12□□□□□ -0.79
SSPN-206ENST00000539019 VAC14Q08AM6 782 aa10.12□□□□□ -0.79
SSPN-206ENST00000539019 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
SSPN-206ENST00000539019 EIF4G2P78344 907 aaKnown RBP eCLIP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms