RNA–Protein interactions for RNA: ENST00000538715.5

PTPN6-211, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-211ENST00000538715 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
PTPN6-211ENST00000538715 SBF2Q86WG5 1849 aa22.64■■□□□ 1.21
PTPN6-211ENST00000538715 WDR17Q8IZU2 1322 aa22.63■■□□□ 1.21
PTPN6-211ENST00000538715 ROCK2O75116 1388 aaKnown RBP22.63■■□□□ 1.21
PTPN6-211ENST00000538715 PLSCR1O15162 318 aa22.62■■□□□ 1.21
PTPN6-211ENST00000538715 DDB1Q16531 1140 aa22.62■■□□□ 1.21
PTPN6-211ENST00000538715 SBNO2Q9Y2G9 1366 aa22.62■■□□□ 1.21
PTPN6-211ENST00000538715 TOM1L2Q6ZVM7 507 aa22.61■■□□□ 1.21
PTPN6-211ENST00000538715 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
PTPN6-211ENST00000538715 ARHGEF25Q86VW2 580 aa22.59■■□□□ 1.21
PTPN6-211ENST00000538715 USP54Q70EL1 1684 aa22.58■■□□□ 1.2
PTPN6-211ENST00000538715 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
PTPN6-211ENST00000538715 BCL11BQ9C0K0 894 aaPredicted RBP22.56■■□□□ 1.2
PTPN6-211ENST00000538715 CCDC7Q96M83 1385 aa22.55■■□□□ 1.2
PTPN6-211ENST00000538715 ZBTB7CA1YPR0 619 aa22.55■■□□□ 1.2
PTPN6-211ENST00000538715 CARD10Q9BWT7 1032 aa22.55■■□□□ 1.2
PTPN6-211ENST00000538715 NFAT5O94916 1531 aa22.55■■□□□ 1.2
PTPN6-211ENST00000538715 SPON1Q9HCB6 807 aa22.54■■□□□ 1.2
PTPN6-211ENST00000538715 KTN1Q86UP2 1357 aaKnown RBP22.53■■□□□ 1.2
PTPN6-211ENST00000538715 AXIN2Q9Y2T1 843 aa22.53■■□□□ 1.2
PTPN6-211ENST00000538715 RGPD5Q99666 1765 aa22.53■■□□□ 1.2
PTPN6-211ENST00000538715 NINLQ9Y2I6 1382 aa22.52■■□□□ 1.2
PTPN6-211ENST00000538715 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
PTPN6-211ENST00000538715 KCNQ2O43526 872 aa22.51■■□□□ 1.19
PTPN6-211ENST00000538715 CSB-PGBD3P0DP91 1061 aa22.49■■□□□ 1.19
PTPN6-211ENST00000538715 TNS2Q63HR2 1409 aa22.48■■□□□ 1.19
PTPN6-211ENST00000538715 MARCH10Q8NA82 808 aaPredicted RBP22.48■■□□□ 1.19
PTPN6-211ENST00000538715 SIN3AQ96ST3 1273 aa22.48■■□□□ 1.19
PTPN6-211ENST00000538715 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
PTPN6-211ENST00000538715 EXOC5O00471 708 aa22.47■■□□□ 1.19
PTPN6-211ENST00000538715 PPP1R1BQ9UD71 204 aaPredicted RBP22.47■■□□□ 1.19
PTPN6-211ENST00000538715 DCAF8L1A6NGE4 600 aa22.46■■□□□ 1.19
PTPN6-211ENST00000538715 PUS7Q96PZ0 661 aaKnown RBP22.46■■□□□ 1.19
PTPN6-211ENST00000538715 NEUROD1Q13562 356 aa22.44■■□□□ 1.18
PTPN6-211ENST00000538715 LTN1O94822 1766 aa22.43■■□□□ 1.18
PTPN6-211ENST00000538715 NHSQ6T4R5 1651 aa22.43■■□□□ 1.18
PTPN6-211ENST00000538715 EDC4Q6P2E9 1401 aaKnown RBP22.43■■□□□ 1.18
PTPN6-211ENST00000538715 ERBB3P21860 1342 aa22.43■■□□□ 1.18
PTPN6-211ENST00000538715 CD163L1Q9NR16 1453 aa22.42■■□□□ 1.18
PTPN6-211ENST00000538715 SLC24A1O60721 1099 aa22.42■■□□□ 1.18
PTPN6-211ENST00000538715 HDGFL2Q7Z4V5 671 aaPredicted RBP22.42■■□□□ 1.18
PTPN6-211ENST00000538715 CARD11Q9BXL7 1154 aa22.42■■□□□ 1.18
PTPN6-211ENST00000538715 FAM208AQ9UK61 1670 aaKnown RBP22.4■■□□□ 1.18
PTPN6-211ENST00000538715 SOX12O15370 315 aa22.4■■□□□ 1.18
PTPN6-211ENST00000538715 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
PTPN6-211ENST00000538715 TERF2IPQ9NYB0 399 aa22.39■■□□□ 1.17
PTPN6-211ENST00000538715 TXNRD1Q16881 649 aa22.38■■□□□ 1.17
PTPN6-211ENST00000538715 PROM2Q8N271 834 aa22.38■■□□□ 1.17
PTPN6-211ENST00000538715 STK32BQ9NY57 414 aa22.38■■□□□ 1.17
PTPN6-211ENST00000538715 IL2RBP14784 551 aa22.36■■□□□ 1.17
PTPN6-211ENST00000538715 YY1P25490 414 aa22.36■■□□□ 1.17
PTPN6-211ENST00000538715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
PTPN6-211ENST00000538715 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
PTPN6-211ENST00000538715 SLC15A2Q16348 729 aa22.35■■□□□ 1.17
PTPN6-211ENST00000538715 PTF1AQ7RTS3 328 aa22.35■■□□□ 1.17
PTPN6-211ENST00000538715 NME9Q86XW9 330 aa22.34■■□□□ 1.17
PTPN6-211ENST00000538715 TMC1Q8TDI8 760 aa22.34■■□□□ 1.17
PTPN6-211ENST00000538715 NLRP2Q9NX02 1062 aa22.33■■□□□ 1.17
PTPN6-211ENST00000538715 A0A1W2PP64 1363 aa22.33■■□□□ 1.17
PTPN6-211ENST00000538715 ANKRD24Q8TF21 1146 aa22.32■■□□□ 1.16
PTPN6-211ENST00000538715 PAPPAQ13219 1627 aa22.31■■□□□ 1.16
PTPN6-211ENST00000538715 MTFR1LQ9H019 292 aa22.31■■□□□ 1.16
PTPN6-211ENST00000538715 BTAF1O14981 1849 aa22.31■■□□□ 1.16
PTPN6-211ENST00000538715 MYOM1P52179 1685 aa22.3■■□□□ 1.16
PTPN6-211ENST00000538715 SLC12A5Q9H2X9 1139 aa22.3■■□□□ 1.16
PTPN6-211ENST00000538715 PTGER2P43116 358 aa22.29■■□□□ 1.16
PTPN6-211ENST00000538715 IP6K1Q92551 441 aa22.28■■□□□ 1.16
PTPN6-211ENST00000538715 ZBTB7AO95365 584 aa22.27■■□□□ 1.16
PTPN6-211ENST00000538715 QSER1Q2KHR3 1735 aa22.27■■□□□ 1.16
PTPN6-211ENST00000538715 PDGFDQ9GZP0 370 aaPredicted RBP22.25■■□□□ 1.15
PTPN6-211ENST00000538715 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
PTPN6-211ENST00000538715 KAT6BQ8WYB5 2073 aa22.24■■□□□ 1.15
PTPN6-211ENST00000538715 SLC27A3Q5K4L6 730 aa22.24■■□□□ 1.15
PTPN6-211ENST00000538715 ACSBG1Q96GR2 724 aa22.24■■□□□ 1.15
PTPN6-211ENST00000538715 COG3Q96JB2 828 aa22.23■■□□□ 1.15
PTPN6-211ENST00000538715 TESK2Q96S53 571 aa22.23■■□□□ 1.15
PTPN6-211ENST00000538715 SGIP1Q9BQI5 828 aa22.23■■□□□ 1.15
PTPN6-211ENST00000538715 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
PTPN6-211ENST00000538715 ANKRD36BQ8N2N9 1353 aa22.22■■□□□ 1.15
PTPN6-211ENST00000538715 UTRNP46939 3433 aa22.22■■□□□ 1.15
PTPN6-211ENST00000538715 SLC16A10Q8TF71 515 aa22.21■■□□□ 1.15
PTPN6-211ENST00000538715 SYT17Q9BSW7 474 aa22.21■■□□□ 1.15
PTPN6-211ENST00000538715 ATF5Q9Y2D1 282 aaPredicted RBP22.21■■□□□ 1.15
PTPN6-211ENST00000538715 HMGB2P26583 209 aaKnown RBP22.19■■□□□ 1.14
PTPN6-211ENST00000538715 CGNL1Q0VF96 1302 aa22.19■■□□□ 1.14
PTPN6-211ENST00000538715 CHD4Q14839 1912 aa22.19■■□□□ 1.14
PTPN6-211ENST00000538715 COL24A1Q17RW2 1714 aa22.18■■□□□ 1.14
PTPN6-211ENST00000538715 FHDC1Q9C0D6 1143 aaPredicted RBP22.18■■□□□ 1.14
PTPN6-211ENST00000538715 MAP3K19Q56UN5 1328 aa22.17■■□□□ 1.14
PTPN6-211ENST00000538715 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
PTPN6-211ENST00000538715 HOXC9P31274 260 aa22.17■■□□□ 1.14
PTPN6-211ENST00000538715 ARXQ96QS3 562 aa22.17■■□□□ 1.14
PTPN6-211ENST00000538715 LY75O60449 1722 aa22.17■■□□□ 1.14
PTPN6-211ENST00000538715 AMPHP49418 695 aa22.16■■□□□ 1.14
PTPN6-211ENST00000538715 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
PTPN6-211ENST00000538715 KIF24Q5T7B8 1368 aa22.15■■□□□ 1.14
PTPN6-211ENST00000538715 DOT1LQ8TEK3 1739 aa22.15■■□□□ 1.14
PTPN6-211ENST00000538715 AKT1S1Q96B36 256 aa22.15■■□□□ 1.14
PTPN6-211ENST00000538715 SHANK3Q9BYB0 1731 aa22.14■■□□□ 1.14
PTPN6-211ENST00000538715 DDX54Q8TDD1 881 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms