RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 ARMC2Q8NEN0 867 aa13.68□□□□□ -0.22
CD9-207ENST00000538418 PUS7Q96PZ0 661 aaKnown RBP13.68□□□□□ -0.22
CD9-207ENST00000538418 OCSTAMPQ9BR26 566 aa13.68□□□□□ -0.22
CD9-207ENST00000538418 NOD1Q9Y239 953 aa13.68□□□□□ -0.22
CD9-207ENST00000538418 VAMP1P23763 118 aa13.67□□□□□ -0.22
CD9-207ENST00000538418 DMRTA1Q5VZB9 504 aa13.67□□□□□ -0.22
CD9-207ENST00000538418 PRR14Q9BWN1 585 aa13.67□□□□□ -0.22
CD9-207ENST00000538418 SNPHO15079 494 aa13.66□□□□□ -0.22
CD9-207ENST00000538418 PRMT3O60678 531 aa13.66□□□□□ -0.22
CD9-207ENST00000538418 ABL1P00519 1130 aa13.66□□□□□ -0.22
CD9-207ENST00000538418 TAS1R3Q7RTX0 852 aa13.66□□□□□ -0.22
CD9-207ENST00000538418 SIX5Q8N196 739 aa13.66□□□□□ -0.22
CD9-207ENST00000538418 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
CD9-207ENST00000538418 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
CD9-207ENST00000538418 DKK1O94907 266 aa13.65□□□□□ -0.22
CD9-207ENST00000538418 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
CD9-207ENST00000538418 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
CD9-207ENST00000538418 CXXC1Q9P0U4 656 aaPredicted RBP13.65□□□□□ -0.22
CD9-207ENST00000538418 FMNL1O95466 1100 aaPredicted RBP13.64□□□□□ -0.23
CD9-207ENST00000538418 TSGA10IPQ3SY00 556 aa13.64□□□□□ -0.23
CD9-207ENST00000538418 H3BRB1 525 aa13.63□□□□□ -0.23
CD9-207ENST00000538418 OCLNQ16625 522 aa13.63□□□□□ -0.23
CD9-207ENST00000538418 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
CD9-207ENST00000538418 C8orf37Q96NL8 207 aa13.63□□□□□ -0.23
CD9-207ENST00000538418 TUT1Q9H6E5 874 aaKnown RBP13.63□□□□□ -0.23
CD9-207ENST00000538418 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
CD9-207ENST00000538418 ICMTO60725 284 aa13.62□□□□□ -0.23
CD9-207ENST00000538418 SEC13P55735 322 aa13.62□□□□□ -0.23
CD9-207ENST00000538418 ZNF211Q13398 564 aaPredicted RBP13.62□□□□□ -0.23
CD9-207ENST00000538418 NBPF14Q5TI25 921 aa13.62□□□□□ -0.23
CD9-207ENST00000538418 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
CD9-207ENST00000538418 THAP11Q96EK4 314 aa13.62□□□□□ -0.23
CD9-207ENST00000538418 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
CD9-207ENST00000538418 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
CD9-207ENST00000538418 CCNYL3P0C7X3 344 aa13.61□□□□□ -0.23
CD9-207ENST00000538418 GLYCTKQ8IVS8 523 aa13.61□□□□□ -0.23
CD9-207ENST00000538418 SCUBE3Q8IX30 993 aa13.61□□□□□ -0.23
CD9-207ENST00000538418 ADAM32Q8TC27 787 aa13.61□□□□□ -0.23
CD9-207ENST00000538418 PRIMPOLQ96LW4 560 aa13.61□□□□□ -0.23
CD9-207ENST00000538418 EVA1BQ9NVM1 165 aa13.61□□□□□ -0.23
CD9-207ENST00000538418 LRCH3Q96II8 777 aa13.6□□□□□ -0.23
CD9-207ENST00000538418 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
CD9-207ENST00000538418 RBM19Q9Y4C8 960 aaKnown RBP13.6□□□□□ -0.23
CD9-207ENST00000538418 MAPK1P28482 360 aa13.59□□□□□ -0.23
CD9-207ENST00000538418 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
CD9-207ENST00000538418 ARHGAP9Q9BRR9 750 aa13.59□□□□□ -0.23
CD9-207ENST00000538418 DOLKQ9UPQ8 538 aa13.59□□□□□ -0.23
CD9-207ENST00000538418 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
CD9-207ENST00000538418 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
CD9-207ENST00000538418 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
CD9-207ENST00000538418 GTF2IP78347 998 aa13.58□□□□□ -0.24
CD9-207ENST00000538418 MAMSTRQ6ZN01 415 aa13.58□□□□□ -0.24
CD9-207ENST00000538418 ASB16Q96NS5 453 aa13.58□□□□□ -0.24
CD9-207ENST00000538418 TAGLNQ01995 201 aaKnown RBP13.57□□□□□ -0.24
CD9-207ENST00000538418 CCDC102BQ68D86 513 aa13.57□□□□□ -0.24
CD9-207ENST00000538418 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.57□□□□□ -0.24
CD9-207ENST00000538418 DCTN4Q9UJW0 460 aa13.57□□□□□ -0.24
CD9-207ENST00000538418 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
CD9-207ENST00000538418 C21orf2O43822 256 aa13.56□□□□□ -0.24
CD9-207ENST00000538418 OXLD1Q5BKU9 147 aa13.56□□□□□ -0.24
CD9-207ENST00000538418 ZBTB33Q86T24 672 aa13.56□□□□□ -0.24
CD9-207ENST00000538418 FAM177A1Q8N128 213 aaPredicted RBP13.56□□□□□ -0.24
CD9-207ENST00000538418 SREK1Q8WXA9 508 aaKnown RBP13.56□□□□□ -0.24
CD9-207ENST00000538418 CCDC85AQ96PX6 553 aaPredicted RBP13.56□□□□□ -0.24
CD9-207ENST00000538418 NUDT12Q9BQG2 462 aa13.56□□□□□ -0.24
CD9-207ENST00000538418 NR1I2O75469 434 aa13.55□□□□□ -0.24
CD9-207ENST00000538418 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
CD9-207ENST00000538418 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
CD9-207ENST00000538418 SFI1A8K8P3 1242 aa13.54□□□□□ -0.24
CD9-207ENST00000538418 RECKO95980 971 aa13.54□□□□□ -0.24
CD9-207ENST00000538418 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
CD9-207ENST00000538418 GTF3C2Q8WUA4 911 aaPredicted RBP13.54□□□□□ -0.24
CD9-207ENST00000538418 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
CD9-207ENST00000538418 DXOO77932 396 aaKnown RBP13.53□□□□□ -0.24
CD9-207ENST00000538418 PBX2P40425 430 aa13.53□□□□□ -0.24
CD9-207ENST00000538418 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
CD9-207ENST00000538418 ECM1Q16610 540 aa13.53□□□□□ -0.24
CD9-207ENST00000538418 MSS51Q4VC12 460 aa13.53□□□□□ -0.24
CD9-207ENST00000538418 TPCN2Q8NHX9 752 aa13.53□□□□□ -0.24
CD9-207ENST00000538418 BCL11AQ9H165 835 aa13.53□□□□□ -0.24
CD9-207ENST00000538418 COL19A1Q14993 1142 aa13.52□□□□□ -0.25
CD9-207ENST00000538418 FKBP4Q02790 459 aaKnown RBP eCLIP13.51□□□□□ -0.25
CD9-207ENST00000538418 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
CD9-207ENST00000538418 PCDHB3Q9Y5E6 796 aa13.51□□□□□ -0.25
CD9-207ENST00000538418 CDK11BP21127 795 aaKnown RBP13.5□□□□□ -0.25
CD9-207ENST00000538418 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
CD9-207ENST00000538418 VARS2Q5ST30 1063 aaKnown RBP13.5□□□□□ -0.25
CD9-207ENST00000538418 SH3BP5LQ7L8J4 393 aa13.5□□□□□ -0.25
CD9-207ENST00000538418 SEPT3Q9UH03 358 aa13.5□□□□□ -0.25
CD9-207ENST00000538418 CDK11AQ9UQ88 783 aaPredicted RBP13.5□□□□□ -0.25
CD9-207ENST00000538418 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
CD9-207ENST00000538418 ERBB3P21860 1342 aa13.49□□□□□ -0.25
CD9-207ENST00000538418 APLP1P51693 650 aa13.49□□□□□ -0.25
CD9-207ENST00000538418 ARHGAP4P98171 946 aa13.49□□□□□ -0.25
CD9-207ENST00000538418 PSME1Q06323 249 aa13.49□□□□□ -0.25
CD9-207ENST00000538418 CCDC125Q86Z20 511 aa13.49□□□□□ -0.25
CD9-207ENST00000538418 HINFPQ9BQA5 517 aa13.49□□□□□ -0.25
CD9-207ENST00000538418 PCDHGA11Q9Y5H2 935 aa13.49□□□□□ -0.25
CD9-207ENST00000538418 GIGYF1O75420 1035 aaPredicted RBP13.48□□□□□ -0.25
CD9-207ENST00000538418 MMP16P51512 607 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms