RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 TOM1L2Q6ZVM7 507 aa18.13■□□□□ 0.49
COPS7A-207ENST00000538375 CCDC125Q86Z20 511 aa18.13■□□□□ 0.49
COPS7A-207ENST00000538375 SPATA31A5Q5VU36 1347 aa18.13■□□□□ 0.49
COPS7A-207ENST00000538375 SPATA31A7Q8IWB4 1347 aa18.13■□□□□ 0.49
COPS7A-207ENST00000538375 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.12■□□□□ 0.49
COPS7A-207ENST00000538375 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
COPS7A-207ENST00000538375 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
COPS7A-207ENST00000538375 OVOS2A0A0J9YW53 1432 aa18.12■□□□□ 0.49
COPS7A-207ENST00000538375 OVOS2Q6IE36 1432 aa18.12■□□□□ 0.49
COPS7A-207ENST00000538375 AMPHP49418 695 aa18.11■□□□□ 0.49
COPS7A-207ENST00000538375 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
COPS7A-207ENST00000538375 CCDC7Q96M83 1385 aa18.11■□□□□ 0.49
COPS7A-207ENST00000538375 SPATA31A1Q5TZJ5 1347 aa18.1■□□□□ 0.49
COPS7A-207ENST00000538375 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
COPS7A-207ENST00000538375 LTV1Q96GA3 475 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-207ENST00000538375 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
COPS7A-207ENST00000538375 NFAT5O94916 1531 aa18.09■□□□□ 0.49
COPS7A-207ENST00000538375 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-207ENST00000538375 GLI3P10071 1580 aa18.08■□□□□ 0.49
COPS7A-207ENST00000538375 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.48
COPS7A-207ENST00000538375 COL5A2P05997 1499 aaPredicted RBP18.07■□□□□ 0.48
COPS7A-207ENST00000538375 MAP3K19Q56UN5 1328 aa18.07■□□□□ 0.48
COPS7A-207ENST00000538375 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
COPS7A-207ENST00000538375 ONECUT3O60422 494 aaPredicted RBP18.07■□□□□ 0.48
COPS7A-207ENST00000538375 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
COPS7A-207ENST00000538375 IP6K1Q92551 441 aa18.07■□□□□ 0.48
COPS7A-207ENST00000538375 LMO7Q8WWI1 1683 aa18.06■□□□□ 0.48
COPS7A-207ENST00000538375 WDR17Q8IZU2 1322 aa18.06■□□□□ 0.48
COPS7A-207ENST00000538375 ANKRD24Q8TF21 1146 aa18.06■□□□□ 0.48
COPS7A-207ENST00000538375 NLRP2Q9NX02 1062 aa18.06■□□□□ 0.48
COPS7A-207ENST00000538375 USP54Q70EL1 1684 aa18.06■□□□□ 0.48
COPS7A-207ENST00000538375 KIF20BQ96Q89 1820 aa18.05■□□□□ 0.48
COPS7A-207ENST00000538375 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
COPS7A-207ENST00000538375 CRB1P82279 1406 aa18.05■□□□□ 0.48
COPS7A-207ENST00000538375 HOXC9P31274 260 aa18.04■□□□□ 0.48
COPS7A-207ENST00000538375 KRT27Q7Z3Y8 459 aa18.04■□□□□ 0.48
COPS7A-207ENST00000538375 COL18A1P39060 1754 aa18.04■□□□□ 0.48
COPS7A-207ENST00000538375 BARGINQ6ZT62 677 aa18.03■□□□□ 0.48
COPS7A-207ENST00000538375 THRAP3Q9Y2W1 955 aaKnown RBP18.03■□□□□ 0.48
COPS7A-207ENST00000538375 LTN1O94822 1766 aa18.02■□□□□ 0.48
COPS7A-207ENST00000538375 BLMP54132 1417 aaPredicted RBP18.02■□□□□ 0.48
COPS7A-207ENST00000538375 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
COPS7A-207ENST00000538375 CARD10Q9BWT7 1032 aa18.02■□□□□ 0.48
COPS7A-207ENST00000538375 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.48
COPS7A-207ENST00000538375 RGPD5Q99666 1765 aa18.02■□□□□ 0.47
COPS7A-207ENST00000538375 PDE3BQ13370 1112 aa18.01■□□□□ 0.47
COPS7A-207ENST00000538375 ERBB3P21860 1342 aa18■□□□□ 0.47
COPS7A-207ENST00000538375 PER1O15534 1290 aaPredicted RBP18■□□□□ 0.47
COPS7A-207ENST00000538375 HSP90AB2PQ58FF8 381 aa18■□□□□ 0.47
COPS7A-207ENST00000538375 FAM182BQ5T319 152 aa18■□□□□ 0.47
COPS7A-207ENST00000538375 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
COPS7A-207ENST00000538375 NSD2O96028 1365 aa17.99■□□□□ 0.47
COPS7A-207ENST00000538375 POLKQ9UBT6 870 aa17.98■□□□□ 0.47
COPS7A-207ENST00000538375 DEFB132Q7Z7B7 95 aa17.97■□□□□ 0.47
COPS7A-207ENST00000538375 ABCC6O95255 1503 aa17.97■□□□□ 0.47
COPS7A-207ENST00000538375 FLT4P35916 1363 aa17.96■□□□□ 0.47
COPS7A-207ENST00000538375 DDB1Q16531 1140 aa17.96■□□□□ 0.47
COPS7A-207ENST00000538375 CDCA7Q9BWT1 371 aaPredicted RBP17.96■□□□□ 0.47
COPS7A-207ENST00000538375 RTL1A6NKG5 1358 aa17.95■□□□□ 0.46
COPS7A-207ENST00000538375 EXOC5O00471 708 aa17.95■□□□□ 0.46
COPS7A-207ENST00000538375 INSRP06213 1382 aa17.94■□□□□ 0.46
COPS7A-207ENST00000538375 BRWD3Q6RI45 1802 aa17.94■□□□□ 0.46
COPS7A-207ENST00000538375 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
COPS7A-207ENST00000538375 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
COPS7A-207ENST00000538375 IL2RBP14784 551 aa17.93■□□□□ 0.46
COPS7A-207ENST00000538375 NBPF6Q5VWK0 638 aa17.93■□□□□ 0.46
COPS7A-207ENST00000538375 USHBP1Q8N6Y0 703 aa17.93■□□□□ 0.46
COPS7A-207ENST00000538375 NBPF4Q96M43 638 aa17.93■□□□□ 0.46
COPS7A-207ENST00000538375 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
COPS7A-207ENST00000538375 SF3B2Q13435 895 aaKnown RBP17.92■□□□□ 0.46
COPS7A-207ENST00000538375 THSD7AQ9UPZ6 1657 aa17.91■□□□□ 0.46
COPS7A-207ENST00000538375 FAM196AQ6ZSG2 479 aa17.91■□□□□ 0.46
COPS7A-207ENST00000538375 ANKRD26Q9UPS8 1709 aa17.9■□□□□ 0.46
COPS7A-207ENST00000538375 MAP2P11137 1827 aaKnown RBP17.9■□□□□ 0.46
COPS7A-207ENST00000538375 PEAK1Q9H792 1746 aa17.89■□□□□ 0.46
COPS7A-207ENST00000538375 MTHFSP49914 203 aa17.89■□□□□ 0.45
COPS7A-207ENST00000538375 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
COPS7A-207ENST00000538375 TRIM37O94972 964 aa17.87■□□□□ 0.45
COPS7A-207ENST00000538375 EIF4A2Q14240 407 aaKnown RBP17.87■□□□□ 0.45
COPS7A-207ENST00000538375 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
COPS7A-207ENST00000538375 TATP17735 454 aaPredicted RBP17.86■□□□□ 0.45
COPS7A-207ENST00000538375 MARCH10Q8NA82 808 aaPredicted RBP17.86■□□□□ 0.45
COPS7A-207ENST00000538375 EYA1Q99502 592 aa17.86■□□□□ 0.45
COPS7A-207ENST00000538375 NPC1L1Q9UHC9 1359 aa17.86■□□□□ 0.45
COPS7A-207ENST00000538375 DISP2A7MBM2 1401 aa17.85■□□□□ 0.45
COPS7A-207ENST00000538375 ZCRB1Q8TBF4 217 aaKnown RBP17.84■□□□□ 0.45
COPS7A-207ENST00000538375 RGPD2P0DJD1 1756 aa17.84■□□□□ 0.45
COPS7A-207ENST00000538375 PARP4Q9UKK3 1724 aaKnown RBP17.84■□□□□ 0.45
COPS7A-207ENST00000538375 FAM208AQ9UK61 1670 aaKnown RBP17.83■□□□□ 0.45
COPS7A-207ENST00000538375 BAG6P46379 1132 aa17.82■□□□□ 0.44
COPS7A-207ENST00000538375 LRRC37A3O60309 1634 aa17.81■□□□□ 0.44
COPS7A-207ENST00000538375 ZNF316A6NFI3 1004 aaPredicted RBP17.81■□□□□ 0.44
COPS7A-207ENST00000538375 APBA3O96018 575 aa17.81■□□□□ 0.44
COPS7A-207ENST00000538375 OVOS2A0A0G2JMS6 1433 aa17.81■□□□□ 0.44
COPS7A-207ENST00000538375 DIAPH1O60610 1272 aaKnown RBP17.8■□□□□ 0.44
COPS7A-207ENST00000538375 TNS2Q63HR2 1409 aa17.8■□□□□ 0.44
COPS7A-207ENST00000538375 WNK3Q9BYP7 1800 aa17.79■□□□□ 0.44
COPS7A-207ENST00000538375 PPP2R1AP30153 589 aa17.79■□□□□ 0.44
COPS7A-207ENST00000538375 IL13P35225 146 aa17.79■□□□□ 0.44
COPS7A-207ENST00000538375 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms