RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 VPS72Q15906 364 aa30.12■■■□□ 2.41
RHBDL3-204ENST00000538145 AMER1Q5JTC6 1135 aaPredicted RBP30.11■■■□□ 2.41
RHBDL3-204ENST00000538145 GJD4Q96KN9 370 aaPredicted RBP30.11■■■□□ 2.41
RHBDL3-204ENST00000538145 GLI3P10071 1580 aa30.1■■■□□ 2.41
RHBDL3-204ENST00000538145 RGPD5Q99666 1765 aa30.1■■■□□ 2.41
RHBDL3-204ENST00000538145 COL5A2P05997 1499 aaPredicted RBP30.09■■■□□ 2.41
RHBDL3-204ENST00000538145 UPF1Q92900 1129 aaKnown RBP eCLIP30.09■■■□□ 2.41
RHBDL3-204ENST00000538145 AXIN2Q9Y2T1 843 aa30.07■■■□□ 2.4
RHBDL3-204ENST00000538145 NPC1L1Q9UHC9 1359 aa30.07■■■□□ 2.4
RHBDL3-204ENST00000538145 MAP3K19Q56UN5 1328 aa30.06■■■□□ 2.4
RHBDL3-204ENST00000538145 ZBTB7CA1YPR0 619 aa30.05■■■□□ 2.4
RHBDL3-204ENST00000538145 FBLN1P23142 703 aa30.04■■■□□ 2.4
RHBDL3-204ENST00000538145 KIF24Q5T7B8 1368 aa30.03■■■□□ 2.4
RHBDL3-204ENST00000538145 BLMP54132 1417 aaPredicted RBP30.03■■■□□ 2.4
RHBDL3-204ENST00000538145 MAP2P11137 1827 aaKnown RBP30.03■■■□□ 2.4
RHBDL3-204ENST00000538145 RTL1A6NKG5 1358 aa30.03■■■□□ 2.4
RHBDL3-204ENST00000538145 IP6K1Q92551 441 aa30.02■■■□□ 2.4
RHBDL3-204ENST00000538145 SPATA31A5Q5VU36 1347 aa30.02■■■□□ 2.4
RHBDL3-204ENST00000538145 SPATA31A7Q8IWB4 1347 aa30.02■■■□□ 2.4
RHBDL3-204ENST00000538145 EVA1CP58658 441 aa30.01■■■□□ 2.4
RHBDL3-204ENST00000538145 STRN4Q9NRL3 753 aa30.01■■■□□ 2.4
RHBDL3-204ENST00000538145 RRS1Q15050 365 aaKnown RBP29.99■■■□□ 2.39
RHBDL3-204ENST00000538145 EP400Q96L91 3159 aa29.99■■■□□ 2.39
RHBDL3-204ENST00000538145 PEAK1Q9H792 1746 aa29.99■■■□□ 2.39
RHBDL3-204ENST00000538145 SPATA31A1Q5TZJ5 1347 aa29.98■■■□□ 2.39
RHBDL3-204ENST00000538145 WDR17Q8IZU2 1322 aa29.98■■■□□ 2.39
RHBDL3-204ENST00000538145 ONECUT3O60422 494 aaPredicted RBP29.97■■■□□ 2.39
RHBDL3-204ENST00000538145 HOXC9P31274 260 aa29.97■■■□□ 2.39
RHBDL3-204ENST00000538145 LARP1Q6PKG0 1096 aaKnown RBP29.97■■■□□ 2.39
RHBDL3-204ENST00000538145 CRB1P82279 1406 aa29.97■■■□□ 2.39
RHBDL3-204ENST00000538145 MORC1Q86VD1 984 aa29.96■■■□□ 2.39
RHBDL3-204ENST00000538145 ERBB3P21860 1342 aa29.96■■■□□ 2.39
RHBDL3-204ENST00000538145 AMPHP49418 695 aa29.96■■■□□ 2.39
RHBDL3-204ENST00000538145 CCDC9Q9Y3X0 531 aaKnown RBP29.96■■■□□ 2.39
RHBDL3-204ENST00000538145 FLT4P35916 1363 aa29.95■■■□□ 2.38
RHBDL3-204ENST00000538145 SMG6Q86US8 1419 aaKnown RBP29.94■■■□□ 2.38
RHBDL3-204ENST00000538145 POLKQ9UBT6 870 aa29.94■■■□□ 2.38
RHBDL3-204ENST00000538145 FAM208AQ9UK61 1670 aaKnown RBP29.94■■■□□ 2.38
RHBDL3-204ENST00000538145 BRWD3Q6RI45 1802 aa29.92■■■□□ 2.38
RHBDL3-204ENST00000538145 INSRP06213 1382 aa29.92■■■□□ 2.38
RHBDL3-204ENST00000538145 THRAP3Q9Y2W1 955 aaKnown RBP29.92■■■□□ 2.38
RHBDL3-204ENST00000538145 EMILIN1Q9Y6C2 1016 aa29.92■■■□□ 2.38
RHBDL3-204ENST00000538145 CC2D1BQ5T0F9 858 aaKnown RBP29.91■■■□□ 2.38
RHBDL3-204ENST00000538145 ANKRD24Q8TF21 1146 aa29.91■■■□□ 2.38
RHBDL3-204ENST00000538145 THSD7AQ9UPZ6 1657 aa29.9■■■□□ 2.38
RHBDL3-204ENST00000538145 ZNF316A6NFI3 1004 aaPredicted RBP29.9■■■□□ 2.38
RHBDL3-204ENST00000538145 BARGINQ6ZT62 677 aa29.9■■■□□ 2.38
RHBDL3-204ENST00000538145 CARD10Q9BWT7 1032 aa29.9■■■□□ 2.38
RHBDL3-204ENST00000538145 TNNT2P45379 298 aaPredicted RBP29.89■■■□□ 2.38
RHBDL3-204ENST00000538145 TOM1L2Q6ZVM7 507 aa29.89■■■□□ 2.38
RHBDL3-204ENST00000538145 CSB-PGBD3P0DP91 1061 aa29.88■■■□□ 2.37
RHBDL3-204ENST00000538145 DDX10Q13206 875 aaKnown RBP29.88■■■□□ 2.37
RHBDL3-204ENST00000538145 TCP11L2Q8N4U5 519 aa29.88■■■□□ 2.37
RHBDL3-204ENST00000538145 HSP90AB2PQ58FF8 381 aa29.87■■■□□ 2.37
RHBDL3-204ENST00000538145 WNK3Q9BYP7 1800 aa29.86■■■□□ 2.37
RHBDL3-204ENST00000538145 FAM98CQ17RN3 349 aaKnown RBP29.86■■■□□ 2.37
RHBDL3-204ENST00000538145 SEPT12Q8IYM1 358 aa29.86■■■□□ 2.37
RHBDL3-204ENST00000538145 USP35Q9P2H5 1018 aa29.84■■■□□ 2.37
RHBDL3-204ENST00000538145 RGPD2P0DJD1 1756 aa29.83■■■□□ 2.37
RHBDL3-204ENST00000538145 PARP4Q9UKK3 1724 aaKnown RBP29.82■■■□□ 2.36
RHBDL3-204ENST00000538145 PPM1GO15355 546 aaPredicted RBP29.81■■■□□ 2.36
RHBDL3-204ENST00000538145 LTV1Q96GA3 475 aaPredicted RBP29.8■■■□□ 2.36
RHBDL3-204ENST00000538145 DISP2A7MBM2 1401 aa29.8■■■□□ 2.36
RHBDL3-204ENST00000538145 NLRP2Q9NX02 1062 aa29.79■■■□□ 2.36
RHBDL3-204ENST00000538145 CCDC125Q86Z20 511 aa29.77■■■□□ 2.36
RHBDL3-204ENST00000538145 CDCA7Q9BWT1 371 aaPredicted RBP29.77■■■□□ 2.36
RHBDL3-204ENST00000538145 PARD3Q8TEW0 1356 aa29.76■■■□□ 2.35
RHBDL3-204ENST00000538145 NCAPD2Q15021 1401 aa29.75■■■□□ 2.35
RHBDL3-204ENST00000538145 MTHFSP49914 203 aa29.74■■■□□ 2.35
RHBDL3-204ENST00000538145 NBPF6Q5VWK0 638 aa29.74■■■□□ 2.35
RHBDL3-204ENST00000538145 KRT27Q7Z3Y8 459 aa29.74■■■□□ 2.35
RHBDL3-204ENST00000538145 NBPF4Q96M43 638 aa29.74■■■□□ 2.35
RHBDL3-204ENST00000538145 LRRC37A3O60309 1634 aa29.73■■■□□ 2.35
RHBDL3-204ENST00000538145 CNGB1Q14028 1251 aaPredicted RBP29.72■■■□□ 2.35
RHBDL3-204ENST00000538145 EIF4A2Q14240 407 aaKnown RBP29.72■■■□□ 2.35
RHBDL3-204ENST00000538145 A0A0G2JS52 829 aa29.71■■■□□ 2.35
RHBDL3-204ENST00000538145 MYT1Q01538 1121 aa29.71■■■□□ 2.35
RHBDL3-204ENST00000538145 IL2RBP14784 551 aa29.69■■■□□ 2.34
RHBDL3-204ENST00000538145 PPP2R1AP30153 589 aa29.69■■■□□ 2.34
RHBDL3-204ENST00000538145 EYA1Q99502 592 aa29.68■■■□□ 2.34
RHBDL3-204ENST00000538145 RGPD1P0DJD0 1748 aa29.67■■■□□ 2.34
RHBDL3-204ENST00000538145 COL3A1P02461 1466 aaPredicted RBP29.66■■■□□ 2.34
RHBDL3-204ENST00000538145 RALBP1Q15311 655 aa29.66■■■□□ 2.34
RHBDL3-204ENST00000538145 TNS2Q63HR2 1409 aa29.65■■■□□ 2.34
RHBDL3-204ENST00000538145 IGSF1Q8N6C5 1336 aa29.65■■■□□ 2.34
RHBDL3-204ENST00000538145 IL13P35225 146 aa29.65■■■□□ 2.34
RHBDL3-204ENST00000538145 DDB1Q16531 1140 aa29.65■■■□□ 2.34
RHBDL3-204ENST00000538145 USHBP1Q8N6Y0 703 aa29.63■■■□□ 2.33
RHBDL3-204ENST00000538145 MEGF6O75095 1541 aa29.62■■■□□ 2.33
RHBDL3-204ENST00000538145 PDE3BQ13370 1112 aa29.62■■■□□ 2.33
RHBDL3-204ENST00000538145 OVOS2A0A0G2JMS6 1433 aa29.61■■■□□ 2.33
RHBDL3-204ENST00000538145 EXOC5O00471 708 aa29.61■■■□□ 2.33
RHBDL3-204ENST00000538145 PLEKHG2Q9H7P9 1386 aa29.6■■■□□ 2.33
RHBDL3-204ENST00000538145 SHANK3Q9BYB0 1731 aa29.58■■■□□ 2.33
RHBDL3-204ENST00000538145 DIAPH1O60610 1272 aaKnown RBP29.58■■■□□ 2.33
RHBDL3-204ENST00000538145 RAPGEF4Q8WZA2 1011 aa29.58■■■□□ 2.33
RHBDL3-204ENST00000538145 KDRP35968 1356 aa29.57■■■□□ 2.32
RHBDL3-204ENST00000538145 BCL9O00512 1426 aa29.57■■■□□ 2.32
RHBDL3-204ENST00000538145 CFAP53Q96M91 514 aa29.56■■■□□ 2.32
RHBDL3-204ENST00000538145 PRKRIP1Q9H875 184 aaPredicted RBP29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms