RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 PANK3Q9H999 370 aa15.78■□□□□ 0.12
SNHG1-206ENST00000537925 AATKQ6ZMQ8 1374 aa15.77■□□□□ 0.12
SNHG1-206ENST00000537925 MAP2P11137 1827 aaKnown RBP15.77■□□□□ 0.11
SNHG1-206ENST00000537925 VPS72Q15906 364 aa15.77■□□□□ 0.11
SNHG1-206ENST00000537925 COG3Q96JB2 828 aa15.77■□□□□ 0.11
SNHG1-206ENST00000537925 SOX12O15370 315 aa15.76■□□□□ 0.11
SNHG1-206ENST00000537925 COL5A2P05997 1499 aaPredicted RBP15.75■□□□□ 0.11
SNHG1-206ENST00000537925 BRWD3Q6RI45 1802 aa15.75■□□□□ 0.11
SNHG1-206ENST00000537925 GJD4Q96KN9 370 aaPredicted RBP15.75■□□□□ 0.11
SNHG1-206ENST00000537925 GGNBP2Q9H3C7 697 aa15.75■□□□□ 0.11
SNHG1-206ENST00000537925 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
SNHG1-206ENST00000537925 RGS12O14924 1447 aa15.73■□□□□ 0.11
SNHG1-206ENST00000537925 ZBTB7CA1YPR0 619 aa15.72■□□□□ 0.11
SNHG1-206ENST00000537925 AXIN2Q9Y2T1 843 aa15.72■□□□□ 0.11
SNHG1-206ENST00000537925 WNK3Q9BYP7 1800 aa15.72■□□□□ 0.11
SNHG1-206ENST00000537925 SPATA31A5Q5VU36 1347 aa15.71■□□□□ 0.11
SNHG1-206ENST00000537925 SPATA31A7Q8IWB4 1347 aa15.71■□□□□ 0.11
SNHG1-206ENST00000537925 STRN4Q9NRL3 753 aa15.71■□□□□ 0.1
SNHG1-206ENST00000537925 FAM208AQ9UK61 1670 aaKnown RBP15.71■□□□□ 0.1
SNHG1-206ENST00000537925 PEAK1Q9H792 1746 aa15.7■□□□□ 0.1
SNHG1-206ENST00000537925 EVA1CP58658 441 aa15.7■□□□□ 0.1
SNHG1-206ENST00000537925 CCDC9Q9Y3X0 531 aaKnown RBP15.7■□□□□ 0.1
SNHG1-206ENST00000537925 NSD2O96028 1365 aa15.69■□□□□ 0.1
SNHG1-206ENST00000537925 THSD7AQ9UPZ6 1657 aa15.69■□□□□ 0.1
SNHG1-206ENST00000537925 RGPD2P0DJD1 1756 aa15.69■□□□□ 0.1
SNHG1-206ENST00000537925 CCER2I3L3R5 266 aa15.69■□□□□ 0.1
SNHG1-206ENST00000537925 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
SNHG1-206ENST00000537925 ONECUT3O60422 494 aaPredicted RBP15.69■□□□□ 0.1
SNHG1-206ENST00000537925 FBLN1P23142 703 aa15.69■□□□□ 0.1
SNHG1-206ENST00000537925 MAP3K19Q56UN5 1328 aa15.69■□□□□ 0.1
SNHG1-206ENST00000537925 SPATA31A1Q5TZJ5 1347 aa15.69■□□□□ 0.1
SNHG1-206ENST00000537925 SRCAPQ6ZRS2 3230 aa15.69■□□□□ 0.1
SNHG1-206ENST00000537925 LARP1Q6PKG0 1096 aaKnown RBP15.68■□□□□ 0.1
SNHG1-206ENST00000537925 KNSTRNQ9Y448 316 aa15.68■□□□□ 0.1
SNHG1-206ENST00000537925 BLMP54132 1417 aaPredicted RBP15.68■□□□□ 0.1
SNHG1-206ENST00000537925 CRB1P82279 1406 aa15.68■□□□□ 0.1
SNHG1-206ENST00000537925 WDR17Q8IZU2 1322 aa15.67■□□□□ 0.1
SNHG1-206ENST00000537925 AMER1Q5JTC6 1135 aaPredicted RBP15.66■□□□□ 0.1
SNHG1-206ENST00000537925 IP6K1Q92551 441 aa15.66■□□□□ 0.1
SNHG1-206ENST00000537925 RTL1A6NKG5 1358 aa15.66■□□□□ 0.1
SNHG1-206ENST00000537925 PARP4Q9UKK3 1724 aaKnown RBP15.66■□□□□ 0.1
SNHG1-206ENST00000537925 RRS1Q15050 365 aaKnown RBP15.65■□□□□ 0.1
SNHG1-206ENST00000537925 ERBB3P21860 1342 aa15.65■□□□□ 0.1
SNHG1-206ENST00000537925 KIF24Q5T7B8 1368 aa15.65■□□□□ 0.1
SNHG1-206ENST00000537925 FAM98CQ17RN3 349 aaKnown RBP15.65■□□□□ 0.1
SNHG1-206ENST00000537925 EP400Q96L91 3159 aa15.64■□□□□ 0.09
SNHG1-206ENST00000537925 HOXC9P31274 260 aa15.64■□□□□ 0.09
SNHG1-206ENST00000537925 THRAP3Q9Y2W1 955 aaKnown RBP15.64■□□□□ 0.09
SNHG1-206ENST00000537925 NPC1L1Q9UHC9 1359 aa15.63■□□□□ 0.09
SNHG1-206ENST00000537925 AMPHP49418 695 aa15.63■□□□□ 0.09
SNHG1-206ENST00000537925 BARGINQ6ZT62 677 aa15.63■□□□□ 0.09
SNHG1-206ENST00000537925 TOM1L2Q6ZVM7 507 aa15.63■□□□□ 0.09
SNHG1-206ENST00000537925 SEPT12Q8IYM1 358 aa15.63■□□□□ 0.09
SNHG1-206ENST00000537925 TCP11L2Q8N4U5 519 aa15.62■□□□□ 0.09
SNHG1-206ENST00000537925 ANKRD24Q8TF21 1146 aa15.62■□□□□ 0.09
SNHG1-206ENST00000537925 CARD10Q9BWT7 1032 aa15.62■□□□□ 0.09
SNHG1-206ENST00000537925 USP35Q9P2H5 1018 aa15.62■□□□□ 0.09
SNHG1-206ENST00000537925 FLT4P35916 1363 aa15.61■□□□□ 0.09
SNHG1-206ENST00000537925 DDX10Q13206 875 aaKnown RBP15.61■□□□□ 0.09
SNHG1-206ENST00000537925 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
SNHG1-206ENST00000537925 LRRC37A3O60309 1634 aa15.61■□□□□ 0.09
SNHG1-206ENST00000537925 INSRP06213 1382 aa15.61■□□□□ 0.09
SNHG1-206ENST00000537925 CSB-PGBD3P0DP91 1061 aa15.6■□□□□ 0.09
SNHG1-206ENST00000537925 MORC1Q86VD1 984 aa15.6■□□□□ 0.09
SNHG1-206ENST00000537925 POLKQ9UBT6 870 aa15.6■□□□□ 0.09
SNHG1-206ENST00000537925 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
SNHG1-206ENST00000537925 TNNT2P45379 298 aaPredicted RBP15.59■□□□□ 0.09
SNHG1-206ENST00000537925 HSP90AB2PQ58FF8 381 aa15.59■□□□□ 0.09
SNHG1-206ENST00000537925 DISP2A7MBM2 1401 aa15.58■□□□□ 0.09
SNHG1-206ENST00000537925 ANP32CO43423 234 aa15.58■□□□□ 0.08
SNHG1-206ENST00000537925 A0A0G2JS52 829 aa15.57■□□□□ 0.08
SNHG1-206ENST00000537925 MYT1Q01538 1121 aa15.57■□□□□ 0.08
SNHG1-206ENST00000537925 CC2D1BQ5T0F9 858 aaKnown RBP15.57■□□□□ 0.08
SNHG1-206ENST00000537925 KRT27Q7Z3Y8 459 aa15.57■□□□□ 0.08
SNHG1-206ENST00000537925 LTV1Q96GA3 475 aaPredicted RBP15.57■□□□□ 0.08
SNHG1-206ENST00000537925 NLRP2Q9NX02 1062 aa15.57■□□□□ 0.08
SNHG1-206ENST00000537925 SBF2Q86WG5 1849 aa15.56■□□□□ 0.08
SNHG1-206ENST00000537925 PPM1GO15355 546 aaPredicted RBP15.55■□□□□ 0.08
SNHG1-206ENST00000537925 CDCA7Q9BWT1 371 aaPredicted RBP15.55■□□□□ 0.08
SNHG1-206ENST00000537925 SHANK3Q9BYB0 1731 aa15.54■□□□□ 0.08
SNHG1-206ENST00000537925 NCAPD2Q15021 1401 aa15.53■□□□□ 0.08
SNHG1-206ENST00000537925 RGPD1P0DJD0 1748 aa15.53■□□□□ 0.08
SNHG1-206ENST00000537925 NBPF6Q5VWK0 638 aa15.52■□□□□ 0.08
SNHG1-206ENST00000537925 NBPF4Q96M43 638 aa15.52■□□□□ 0.08
SNHG1-206ENST00000537925 SUPT16HQ9Y5B9 1047 aaKnown RBP15.52■□□□□ 0.08
SNHG1-206ENST00000537925 IL2RBP14784 551 aa15.51■□□□□ 0.07
SNHG1-206ENST00000537925 DDB1Q16531 1140 aa15.51■□□□□ 0.07
SNHG1-206ENST00000537925 TNS2Q63HR2 1409 aa15.51■□□□□ 0.07
SNHG1-206ENST00000537925 TNS1Q9HBL0 1735 aaKnown RBP15.5■□□□□ 0.07
SNHG1-206ENST00000537925 PDE3BQ13370 1112 aa15.5■□□□□ 0.07
SNHG1-206ENST00000537925 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
SNHG1-206ENST00000537925 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
SNHG1-206ENST00000537925 PKD1L3Q7Z443 1732 aa15.49■□□□□ 0.07
SNHG1-206ENST00000537925 KAT6BQ8WYB5 2073 aa15.49■□□□□ 0.07
SNHG1-206ENST00000537925 MTHFSP49914 203 aa15.49■□□□□ 0.07
SNHG1-206ENST00000537925 FAM182BQ5T319 152 aa15.49■□□□□ 0.07
SNHG1-206ENST00000537925 MEGF6O75095 1541 aa15.49■□□□□ 0.07
SNHG1-206ENST00000537925 EXOC5O00471 708 aa15.48■□□□□ 0.07
SNHG1-206ENST00000537925 USHBP1Q8N6Y0 703 aa15.48■□□□□ 0.07
SNHG1-206ENST00000537925 OVOS2A0A0G2JMS6 1433 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms