RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 HAP1P54257 671 aaPredicted RBP20.95■□□□□ 0.94
SFSWAP-206ENST00000537582 EIF4A2Q14240 407 aaKnown RBP20.95■□□□□ 0.94
SFSWAP-206ENST00000537582 WDR43Q15061 677 aaKnown RBP eCLIP20.94■□□□□ 0.94
SFSWAP-206ENST00000537582 IP6K1Q92551 441 aa20.94■□□□□ 0.94
SFSWAP-206ENST00000537582 AXIN2Q9Y2T1 843 aa20.94■□□□□ 0.94
SFSWAP-206ENST00000537582 RTL1A6NKG5 1358 aa20.94■□□□□ 0.94
SFSWAP-206ENST00000537582 U2SURPO15042 1029 aaKnown RBP20.93■□□□□ 0.94
SFSWAP-206ENST00000537582 LTV1Q96GA3 475 aaPredicted RBP20.93■□□□□ 0.94
SFSWAP-206ENST00000537582 CPDO75976 1380 aa20.93■□□□□ 0.94
SFSWAP-206ENST00000537582 KIF24Q5T7B8 1368 aa20.92■□□□□ 0.94
SFSWAP-206ENST00000537582 COL18A1P39060 1754 aa20.91■□□□□ 0.94
SFSWAP-206ENST00000537582 U2AF1L5P0DN76 240 aaPredicted RBP20.91■□□□□ 0.94
SFSWAP-206ENST00000537582 U2AF1Q01081 240 aaKnown RBP eCLIP20.91■□□□□ 0.94
SFSWAP-206ENST00000537582 NUTM2BA6NNL0 878 aaPredicted RBP20.9■□□□□ 0.94
SFSWAP-206ENST00000537582 NUTM2EB1AL46 878 aaPredicted RBP20.9■□□□□ 0.94
SFSWAP-206ENST00000537582 NUTM2AQ8IVF1 878 aaPredicted RBP20.9■□□□□ 0.94
SFSWAP-206ENST00000537582 PRDM11Q9NQV5 511 aa20.9■□□□□ 0.94
SFSWAP-206ENST00000537582 CCDC146Q8IYE0 955 aa20.89■□□□□ 0.94
SFSWAP-206ENST00000537582 JCADQ9P266 1359 aa20.89■□□□□ 0.93
SFSWAP-206ENST00000537582 RGPD5Q99666 1765 aa20.89■□□□□ 0.93
SFSWAP-206ENST00000537582 FAM83GA6ND36 823 aa20.88■□□□□ 0.93
SFSWAP-206ENST00000537582 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
SFSWAP-206ENST00000537582 BLMP54132 1417 aaPredicted RBP20.87■□□□□ 0.93
SFSWAP-206ENST00000537582 RGPD1P0DJD0 1748 aa20.87■□□□□ 0.93
SFSWAP-206ENST00000537582 ADAMTS2O95450 1211 aa20.87■□□□□ 0.93
SFSWAP-206ENST00000537582 HMOX1P09601 288 aa20.87■□□□□ 0.93
SFSWAP-206ENST00000537582 AEBP1Q8IUX7 1158 aa20.86■□□□□ 0.93
SFSWAP-206ENST00000537582 ANKRD24Q8TF21 1146 aa20.86■□□□□ 0.93
SFSWAP-206ENST00000537582 LMO7Q8WWI1 1683 aa20.86■□□□□ 0.93
SFSWAP-206ENST00000537582 CAMTA1Q9Y6Y1 1673 aa20.86■□□□□ 0.93
SFSWAP-206ENST00000537582 EYA1Q99502 592 aa20.85■□□□□ 0.93
SFSWAP-206ENST00000537582 USHBP1Q8N6Y0 703 aa20.84■□□□□ 0.93
SFSWAP-206ENST00000537582 ERBB3P21860 1342 aa20.83■□□□□ 0.93
SFSWAP-206ENST00000537582 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.92
SFSWAP-206ENST00000537582 LRP6O75581 1613 aa20.83■□□□□ 0.92
SFSWAP-206ENST00000537582 ABCC6O95255 1503 aa20.83■□□□□ 0.92
SFSWAP-206ENST00000537582 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
SFSWAP-206ENST00000537582 IGSF1Q8N6C5 1336 aa20.82■□□□□ 0.92
SFSWAP-206ENST00000537582 NBPF6Q5VWK0 638 aa20.82■□□□□ 0.92
SFSWAP-206ENST00000537582 SULT6B1Q6IMI4 303 aa20.82■□□□□ 0.92
SFSWAP-206ENST00000537582 NBPF4Q96M43 638 aa20.82■□□□□ 0.92
SFSWAP-206ENST00000537582 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
SFSWAP-206ENST00000537582 PLEKHF1Q96S99 279 aa20.8■□□□□ 0.92
SFSWAP-206ENST00000537582 COL5A2P05997 1499 aaPredicted RBP20.8■□□□□ 0.92
SFSWAP-206ENST00000537582 PRKAR2BP31323 418 aa20.8■□□□□ 0.92
SFSWAP-206ENST00000537582 BTG4Q9NY30 223 aa20.79■□□□□ 0.92
SFSWAP-206ENST00000537582 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
SFSWAP-206ENST00000537582 COL14A1Q05707 1796 aaKnown RBP20.79■□□□□ 0.92
SFSWAP-206ENST00000537582 STRN4Q9NRL3 753 aa20.78■□□□□ 0.92
SFSWAP-206ENST00000537582 APAF1O14727 1248 aa20.77■□□□□ 0.92
SFSWAP-206ENST00000537582 FCHSD2O94868 740 aa20.77■□□□□ 0.92
SFSWAP-206ENST00000537582 CSB-PGBD3P0DP91 1061 aa20.77■□□□□ 0.92
SFSWAP-206ENST00000537582 RUNDC1Q96C34 613 aa20.77■□□□□ 0.92
SFSWAP-206ENST00000537582 PHACTR3Q96KR7 559 aa20.77■□□□□ 0.92
SFSWAP-206ENST00000537582 SPATA31A6Q5VVP1 1343 aa20.77■□□□□ 0.92
SFSWAP-206ENST00000537582 RRP7AQ9Y3A4 280 aaKnown RBP20.76■□□□□ 0.91
SFSWAP-206ENST00000537582 KDRP35968 1356 aa20.76■□□□□ 0.91
SFSWAP-206ENST00000537582 PLCH1Q4KWH8 1693 aa20.76■□□□□ 0.91
SFSWAP-206ENST00000537582 NLRP2Q9NX02 1062 aa20.76■□□□□ 0.91
SFSWAP-206ENST00000537582 LARP1Q6PKG0 1096 aaKnown RBP20.75■□□□□ 0.91
SFSWAP-206ENST00000537582 TCP11L2Q8N4U5 519 aa20.74■□□□□ 0.91
SFSWAP-206ENST00000537582 FBXO41Q8TF61 875 aa20.74■□□□□ 0.91
SFSWAP-206ENST00000537582 C8orf37Q96NL8 207 aa20.74■□□□□ 0.91
SFSWAP-206ENST00000537582 NCAPD2Q15021 1401 aa20.74■□□□□ 0.91
SFSWAP-206ENST00000537582 WDR17Q8IZU2 1322 aa20.74■□□□□ 0.91
SFSWAP-206ENST00000537582 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
SFSWAP-206ENST00000537582 EVA1CP58658 441 aa20.72■□□□□ 0.91
SFSWAP-206ENST00000537582 NEUROD2Q15784 382 aa20.72■□□□□ 0.91
SFSWAP-206ENST00000537582 MAPK8IP3Q9UPT6 1336 aa20.71■□□□□ 0.91
SFSWAP-206ENST00000537582 NRAPQ86VF7 1730 aa20.71■□□□□ 0.91
SFSWAP-206ENST00000537582 TOM1L2Q6ZVM7 507 aa20.71■□□□□ 0.91
SFSWAP-206ENST00000537582 SLIT2O94813 1529 aa20.7■□□□□ 0.9
SFSWAP-206ENST00000537582 TMPOP42166 694 aaKnown RBP20.68■□□□□ 0.9
SFSWAP-206ENST00000537582 NGLY1Q96IV0 654 aa20.68■□□□□ 0.9
SFSWAP-206ENST00000537582 MEGF6O75095 1541 aa20.68■□□□□ 0.9
SFSWAP-206ENST00000537582 MEX3CQ5U5Q3 659 aaKnown RBP20.68■□□□□ 0.9
SFSWAP-206ENST00000537582 PNNQ9H307 717 aaKnown RBP20.68■□□□□ 0.9
SFSWAP-206ENST00000537582 USP35Q9P2H5 1018 aa20.68■□□□□ 0.9
SFSWAP-206ENST00000537582 ZBED9Q6R2W3 1325 aa20.67■□□□□ 0.9
SFSWAP-206ENST00000537582 CRB1P82279 1406 aa20.66■□□□□ 0.9
SFSWAP-206ENST00000537582 MTHFSDQ2M296 383 aaKnown RBP20.66■□□□□ 0.9
SFSWAP-206ENST00000537582 CARD10Q9BWT7 1032 aa20.66■□□□□ 0.9
SFSWAP-206ENST00000537582 BCL9LQ86UU0 1499 aa20.66■□□□□ 0.9
SFSWAP-206ENST00000537582 NWD2Q9ULI1 1742 aa20.65■□□□□ 0.9
SFSWAP-206ENST00000537582 NFE2L2Q16236 605 aa20.65■□□□□ 0.9
SFSWAP-206ENST00000537582 NEFMP07197 916 aa20.63■□□□□ 0.89
SFSWAP-206ENST00000537582 RIPK4P57078 832 aa20.63■□□□□ 0.89
SFSWAP-206ENST00000537582 FNBP4Q8N3X1 1017 aaPredicted RBP20.63■□□□□ 0.89
SFSWAP-206ENST00000537582 TRIM35Q9UPQ4 493 aa20.63■□□□□ 0.89
SFSWAP-206ENST00000537582 ZNF521Q96K83 1311 aa20.62■□□□□ 0.89
SFSWAP-206ENST00000537582 UNC5CLQ8IV45 518 aa20.62■□□□□ 0.89
SFSWAP-206ENST00000537582 RAPGEF4Q8WZA2 1011 aa20.62■□□□□ 0.89
SFSWAP-206ENST00000537582 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
SFSWAP-206ENST00000537582 AFF2P51816 1311 aa20.6■□□□□ 0.89
SFSWAP-206ENST00000537582 WWC1Q8IX03 1113 aa20.6■□□□□ 0.89
SFSWAP-206ENST00000537582 THUMPD2Q9BTF0 503 aaKnown RBP20.6■□□□□ 0.89
SFSWAP-206ENST00000537582 USP21Q9UK80 565 aa20.6■□□□□ 0.89
SFSWAP-206ENST00000537582 SPATA31A1Q5TZJ5 1347 aa20.6■□□□□ 0.89
SFSWAP-206ENST00000537582 TATP17735 454 aaPredicted RBP20.59■□□□□ 0.89
SFSWAP-206ENST00000537582 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms