RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 TERF2IPQ9NYB0 399 aa15.17■□□□□ 0.02
LDHA-215ENST00000537296 NINLQ9Y2I6 1382 aa15.16■□□□□ 0.02
LDHA-215ENST00000537296 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
LDHA-215ENST00000537296 SPATA31A5Q5VU36 1347 aa15.16■□□□□ 0.02
LDHA-215ENST00000537296 SPATA31A7Q8IWB4 1347 aa15.16■□□□□ 0.02
LDHA-215ENST00000537296 ANKRD36BQ8N2N9 1353 aa15.16■□□□□ 0.02
LDHA-215ENST00000537296 LTN1O94822 1766 aa15.15■□□□□ 0.02
LDHA-215ENST00000537296 EIF4G2P78344 907 aaKnown RBP eCLIP15.15■□□□□ 0.02
LDHA-215ENST00000537296 UPF1Q92900 1129 aaKnown RBP eCLIP15.15■□□□□ 0.02
LDHA-215ENST00000537296 USP31Q70CQ4 1352 aa15.15■□□□□ 0.02
LDHA-215ENST00000537296 FAM98CQ17RN3 349 aaKnown RBP15.14■□□□□ 0.01
LDHA-215ENST00000537296 SEPT12Q8IYM1 358 aa15.14■□□□□ 0.01
LDHA-215ENST00000537296 AXIN2Q9Y2T1 843 aa15.14■□□□□ 0.01
LDHA-215ENST00000537296 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
LDHA-215ENST00000537296 OVOS2A0A0J9YW53 1432 aa15.13■□□□□ 0.01
LDHA-215ENST00000537296 OVOS2Q6IE36 1432 aa15.13■□□□□ 0.01
LDHA-215ENST00000537296 LARP1Q6PKG0 1096 aaKnown RBP15.13■□□□□ 0.01
LDHA-215ENST00000537296 THSD7AQ9UPZ6 1657 aa15.13■□□□□ 0.01
LDHA-215ENST00000537296 AATKQ6ZMQ8 1374 aa15.13■□□□□ 0.01
LDHA-215ENST00000537296 SPATA31A1Q5TZJ5 1347 aa15.12■□□□□ 0.01
LDHA-215ENST00000537296 ONECUT3O60422 494 aaPredicted RBP15.12■□□□□ 0.01
LDHA-215ENST00000537296 ARHGEF25Q86VW2 580 aa15.12■□□□□ 0.01
LDHA-215ENST00000537296 USP35Q9P2H5 1018 aa15.12■□□□□ 0.01
LDHA-215ENST00000537296 KIF20BQ96Q89 1820 aa15.12■□□□□ 0.01
LDHA-215ENST00000537296 C11orf95C9JLR9 678 aaPredicted RBP15.12■□□□□ 0.01
LDHA-215ENST00000537296 CDCA8Q53HL2 280 aa15.12■□□□□ 0.01
LDHA-215ENST00000537296 POLR3GLQ9BT43 218 aa15.12■□□□□ 0.01
LDHA-215ENST00000537296 EVA1CP58658 441 aa15.11■□□□□ 0.01
LDHA-215ENST00000537296 KCNH5Q8NCM2 988 aa15.11■□□□□ 0.01
LDHA-215ENST00000537296 CARD14Q9BXL6 1004 aa15.11■□□□□ 0.01
LDHA-215ENST00000537296 A0A0G2JS52 829 aa15.1■□□□□ 0.01
LDHA-215ENST00000537296 FBLN1P23142 703 aa15.1■□□□□ 0.01
LDHA-215ENST00000537296 MYT1Q01538 1121 aa15.1■□□□□ 0.01
LDHA-215ENST00000537296 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
LDHA-215ENST00000537296 FYB1O15117 783 aa15.07■□□□□ 0
LDHA-215ENST00000537296 FAM182BQ5T319 152 aa15.07■□□□□ 0
LDHA-215ENST00000537296 GGNBP2Q9H3C7 697 aa15.07■□□□□ 0
LDHA-215ENST00000537296 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
LDHA-215ENST00000537296 WNK3Q9BYP7 1800 aa15.07■□□□□ 0
LDHA-215ENST00000537296 CRB1P82279 1406 aa15.07■□□□□ 0
LDHA-215ENST00000537296 KRT27Q7Z3Y8 459 aa15.06■□□□□ 0
LDHA-215ENST00000537296 COG3Q96JB2 828 aa15.06■□□□□ 0
LDHA-215ENST00000537296 ABCC6O95255 1503 aa15.05■□□□□ -0
LDHA-215ENST00000537296 CAPN15O75808 1086 aa15.05■□□□□ -0
LDHA-215ENST00000537296 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
LDHA-215ENST00000537296 PARP4Q9UKK3 1724 aaKnown RBP15.04■□□□□ -0
LDHA-215ENST00000537296 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
LDHA-215ENST00000537296 BARGINQ6ZT62 677 aa15.03■□□□□ -0
LDHA-215ENST00000537296 TOM1L2Q6ZVM7 507 aa15.03■□□□□ -0
LDHA-215ENST00000537296 LRRC37A3O60309 1634 aa15.02■□□□□ -0
LDHA-215ENST00000537296 MAP3K19Q56UN5 1328 aa15.02■□□□□ -0
LDHA-215ENST00000537296 RGPD2P0DJD1 1756 aa15.02□□□□□ -0.01
LDHA-215ENST00000537296 PEAK1Q9H792 1746 aa15.02□□□□□ -0.01
LDHA-215ENST00000537296 CSB-PGBD3P0DP91 1061 aa15.02□□□□□ -0.01
LDHA-215ENST00000537296 ERBB3P21860 1342 aa15.01□□□□□ -0.01
LDHA-215ENST00000537296 KIF7Q2M1P5 1343 aa15.01□□□□□ -0.01
LDHA-215ENST00000537296 RRS1Q15050 365 aaKnown RBP15.01□□□□□ -0.01
LDHA-215ENST00000537296 PANK3Q9H999 370 aa15.01□□□□□ -0.01
LDHA-215ENST00000537296 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
LDHA-215ENST00000537296 THRAP3Q9Y2W1 955 aaKnown RBP15□□□□□ -0.01
LDHA-215ENST00000537296 ANKRD26Q9UPS8 1709 aa15□□□□□ -0.01
LDHA-215ENST00000537296 ANKRD24Q8TF21 1146 aa14.99□□□□□ -0.01
LDHA-215ENST00000537296 IP6K1Q92551 441 aa14.99□□□□□ -0.01
LDHA-215ENST00000537296 HOXC9P31274 260 aa14.98□□□□□ -0.01
LDHA-215ENST00000537296 LTV1Q96GA3 475 aaPredicted RBP14.98□□□□□ -0.01
LDHA-215ENST00000537296 CARD10Q9BWT7 1032 aa14.98□□□□□ -0.01
LDHA-215ENST00000537296 MAP2P11137 1827 aaKnown RBP14.98□□□□□ -0.01
LDHA-215ENST00000537296 DISP2A7MBM2 1401 aa14.98□□□□□ -0.01
LDHA-215ENST00000537296 BLMP54132 1417 aaPredicted RBP14.98□□□□□ -0.01
LDHA-215ENST00000537296 TNS1Q9HBL0 1735 aaKnown RBP14.97□□□□□ -0.01
LDHA-215ENST00000537296 AMPHP49418 695 aa14.97□□□□□ -0.01
LDHA-215ENST00000537296 DEFB132Q7Z7B7 95 aa14.97□□□□□ -0.01
LDHA-215ENST00000537296 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
LDHA-215ENST00000537296 CGNL1Q0VF96 1302 aa14.96□□□□□ -0.01
LDHA-215ENST00000537296 FAM208AQ9UK61 1670 aaKnown RBP14.96□□□□□ -0.01
LDHA-215ENST00000537296 RGPD1P0DJD0 1748 aa14.96□□□□□ -0.01
LDHA-215ENST00000537296 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.02
LDHA-215ENST00000537296 PDE3BQ13370 1112 aa14.95□□□□□ -0.02
LDHA-215ENST00000537296 EMILIN1Q9Y6C2 1016 aa14.95□□□□□ -0.02
LDHA-215ENST00000537296 SBF2Q86WG5 1849 aa14.94□□□□□ -0.02
LDHA-215ENST00000537296 WASHC2AQ641Q2 1341 aa14.94□□□□□ -0.02
LDHA-215ENST00000537296 RTL1A6NKG5 1358 aa14.94□□□□□ -0.02
LDHA-215ENST00000537296 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
LDHA-215ENST00000537296 TNNT2P45379 298 aaPredicted RBP14.93□□□□□ -0.02
LDHA-215ENST00000537296 DDB1Q16531 1140 aa14.93□□□□□ -0.02
LDHA-215ENST00000537296 HSP90AB2PQ58FF8 381 aa14.93□□□□□ -0.02
LDHA-215ENST00000537296 CCDC125Q86Z20 511 aa14.93□□□□□ -0.02
LDHA-215ENST00000537296 TRIM37O94972 964 aa14.92□□□□□ -0.02
LDHA-215ENST00000537296 FAM196AQ6ZSG2 479 aa14.92□□□□□ -0.02
LDHA-215ENST00000537296 MARCH10Q8NA82 808 aaPredicted RBP14.92□□□□□ -0.02
LDHA-215ENST00000537296 FLT4P35916 1363 aa14.91□□□□□ -0.02
LDHA-215ENST00000537296 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
LDHA-215ENST00000537296 TNS2Q63HR2 1409 aa14.9□□□□□ -0.02
LDHA-215ENST00000537296 NBPF6Q5VWK0 638 aa14.9□□□□□ -0.02
LDHA-215ENST00000537296 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
LDHA-215ENST00000537296 NBPF4Q96M43 638 aa14.9□□□□□ -0.02
LDHA-215ENST00000537296 CDCA7Q9BWT1 371 aaPredicted RBP14.9□□□□□ -0.02
LDHA-215ENST00000537296 POLKQ9UBT6 870 aa14.9□□□□□ -0.02
LDHA-215ENST00000537296 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
LDHA-215ENST00000537296 SHANK3Q9BYB0 1731 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms