RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 AGLP35573 1532 aa8.32□□□□□ -1.08
USP30-208ENST00000536393 CDK12Q9NYV4 1490 aaPredicted RBP8.32□□□□□ -1.08
USP30-208ENST00000536393 FAM135BQ49AJ0 1406 aa8.31□□□□□ -1.08
USP30-208ENST00000536393 CD109Q6YHK3 1445 aa8.31□□□□□ -1.08
USP30-208ENST00000536393 RRP9O43818 475 aaKnown RBP8.31□□□□□ -1.08
USP30-208ENST00000536393 NPM1P06748 294 aaKnown RBP eCLIP8.31□□□□□ -1.08
USP30-208ENST00000536393 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
USP30-208ENST00000536393 MCM2P49736 904 aa8.31□□□□□ -1.08
USP30-208ENST00000536393 GNAI1P63096 354 aa8.31□□□□□ -1.08
USP30-208ENST00000536393 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
USP30-208ENST00000536393 SMC4Q9NTJ3 1288 aa8.31□□□□□ -1.08
USP30-208ENST00000536393 IFT57Q9NWB7 429 aa8.31□□□□□ -1.08
USP30-208ENST00000536393 PCDHB15Q9Y5E8 787 aa8.31□□□□□ -1.08
USP30-208ENST00000536393 TPM2P07951 284 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 U2AF1L5P0DN76 240 aaPredicted RBP8.3□□□□□ -1.08
USP30-208ENST00000536393 TRIM27P14373 513 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 MCM5P33992 734 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 U2AF1Q01081 240 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP30-208ENST00000536393 EVX2Q03828 476 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 RABEP1Q15276 862 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 CASC1Q6TDU7 716 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 MTERF4Q7Z6M4 381 aaKnown RBP8.3□□□□□ -1.08
USP30-208ENST00000536393 PANK1Q8TE04 598 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 MAP7D2Q96T17 732 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 PTPRMP28827 1452 aa8.3□□□□□ -1.08
USP30-208ENST00000536393 EDC4Q6P2E9 1401 aaKnown RBP8.29□□□□□ -1.08
USP30-208ENST00000536393 TMEM131LA2VDJ0 1609 aa8.29□□□□□ -1.08
USP30-208ENST00000536393 TRAK2O60296 914 aa8.29□□□□□ -1.08
USP30-208ENST00000536393 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
USP30-208ENST00000536393 CCDC173Q0VFZ6 552 aa8.29□□□□□ -1.08
USP30-208ENST00000536393 CREBZFQ9NS37 354 aa8.29□□□□□ -1.08
USP30-208ENST00000536393 A0A1W2PP64 1363 aa8.29□□□□□ -1.08
USP30-208ENST00000536393 DIP2CQ9Y2E4 1556 aa8.29□□□□□ -1.08
USP30-208ENST00000536393 KNDC1Q76NI1 1749 aa8.29□□□□□ -1.08
USP30-208ENST00000536393 ARHGEF10O15013 1369 aa8.28□□□□□ -1.08
USP30-208ENST00000536393 CD44P16070 742 aaKnown RBP8.28□□□□□ -1.08
USP30-208ENST00000536393 KLHL40Q2TBA0 621 aa8.28□□□□□ -1.08
USP30-208ENST00000536393 CHD1LQ86WJ1 897 aa8.28□□□□□ -1.08
USP30-208ENST00000536393 TRIM44Q96DX7 344 aaPredicted RBP8.28□□□□□ -1.08
USP30-208ENST00000536393 SLC12A5Q9H2X9 1139 aa8.28□□□□□ -1.08
USP30-208ENST00000536393 BRPF3Q9ULD4 1205 aa8.28□□□□□ -1.08
USP30-208ENST00000536393 LRRC7Q96NW7 1537 aa8.28□□□□□ -1.08
USP30-208ENST00000536393 TECPR2O15040 1411 aa8.28□□□□□ -1.08
USP30-208ENST00000536393 YTHDC2Q9H6S0 1430 aaKnown RBP8.28□□□□□ -1.08
USP30-208ENST00000536393 ABCC4O15439 1325 aa8.28□□□□□ -1.08
USP30-208ENST00000536393 PREX1Q8TCU6 1659 aa8.27□□□□□ -1.08
USP30-208ENST00000536393 KIAA0232Q92628 1395 aa8.27□□□□□ -1.09
USP30-208ENST00000536393 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
USP30-208ENST00000536393 RLBP1P12271 317 aa8.27□□□□□ -1.09
USP30-208ENST00000536393 HDGFP51858 240 aaKnown RBP8.27□□□□□ -1.09
USP30-208ENST00000536393 RPAP2Q8IXW5 612 aaPredicted RBP8.27□□□□□ -1.09
USP30-208ENST00000536393 GRPEL1Q9HAV7 217 aa8.27□□□□□ -1.09
USP30-208ENST00000536393 PTPRCP08575 1304 aa8.27□□□□□ -1.09
USP30-208ENST00000536393 CDC45O75419 566 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 ITPRIPQ8IWB1 547 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 SSH1Q8WYL5 1049 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 IL17RAQ96F46 866 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 PPP1R9BQ96SB3 815 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 TRIM35Q9UPQ4 493 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 TRAK1Q9UPV9 953 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 SSH2Q76I76 1423 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 RICTORQ6R327 1708 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 CD163L1Q9NR16 1453 aa8.26□□□□□ -1.09
USP30-208ENST00000536393 REC8O95072 547 aa8.25□□□□□ -1.09
USP30-208ENST00000536393 ZNF853P0CG23 659 aa8.25□□□□□ -1.09
USP30-208ENST00000536393 XRCC6P12956 609 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP30-208ENST00000536393 ZNF445P59923 1031 aa8.25□□□□□ -1.09
USP30-208ENST00000536393 NFE2L2Q16236 605 aa8.25□□□□□ -1.09
USP30-208ENST00000536393 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP30-208ENST00000536393 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
USP30-208ENST00000536393 POGKQ9P215 609 aa8.25□□□□□ -1.09
USP30-208ENST00000536393 CACNA1FO60840 1977 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 SPATA31D1Q6ZQQ2 1576 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 ESPNB1AK53 854 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 FYB1O15117 783 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 ZBTB7BO15156 539 aaPredicted RBP8.24□□□□□ -1.09
USP30-208ENST00000536393 ST18O60284 1047 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 SEC24BO95487 1268 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 MBD3O95983 291 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
USP30-208ENST00000536393 SLC4A3P48751 1232 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 RIPK4P57078 832 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 ANAPC15P60006 121 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 EXOSC9Q06265 439 aaKnown RBP8.24□□□□□ -1.09
USP30-208ENST00000536393 CSPP1Q1MSJ5 1256 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 INTS3Q68E01 1043 aaKnown RBP8.24□□□□□ -1.09
USP30-208ENST00000536393 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.24□□□□□ -1.09
USP30-208ENST00000536393 BABAM1Q9NWV8 329 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 ALKQ9UM73 1620 aa8.24□□□□□ -1.09
USP30-208ENST00000536393 RTL1A6NKG5 1358 aa8.23□□□□□ -1.09
USP30-208ENST00000536393 SIGLEC1Q9BZZ2 1709 aa8.23□□□□□ -1.09
USP30-208ENST00000536393 NRKQ7Z2Y5 1582 aa8.23□□□□□ -1.09
USP30-208ENST00000536393 HMMRO75330 724 aa8.23□□□□□ -1.09
USP30-208ENST00000536393 HSP90AA1P07900 732 aaKnown RBP8.23□□□□□ -1.09
USP30-208ENST00000536393 OSBPL3Q9H4L5 887 aa8.23□□□□□ -1.09
USP30-208ENST00000536393 NOB1Q9ULX3 412 aaKnown RBP8.23□□□□□ -1.09
USP30-208ENST00000536393 PHF14O94880 888 aa8.22□□□□□ -1.09
USP30-208ENST00000536393 MFAP1P55081 439 aaKnown RBP8.22□□□□□ -1.09
USP30-208ENST00000536393 TMEM57Q8N5G2 664 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms