RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 VPS72Q15906 364 aa15.62■□□□□ 0.09
TNFRSF1A-208ENST00000536194 GJD4Q96KN9 370 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-208ENST00000536194 AXIN2Q9Y2T1 843 aa15.62■□□□□ 0.09
TNFRSF1A-208ENST00000536194 PEAK1Q9H792 1746 aa15.61■□□□□ 0.09
TNFRSF1A-208ENST00000536194 CGNL1Q0VF96 1302 aa15.61■□□□□ 0.09
TNFRSF1A-208ENST00000536194 MAP2P11137 1827 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1A-208ENST00000536194 BRWD3Q6RI45 1802 aa15.6■□□□□ 0.09
TNFRSF1A-208ENST00000536194 STRN4Q9NRL3 753 aa15.6■□□□□ 0.09
TNFRSF1A-208ENST00000536194 MAP3K19Q56UN5 1328 aa15.59■□□□□ 0.09
TNFRSF1A-208ENST00000536194 THSD7AQ9UPZ6 1657 aa15.58■□□□□ 0.08
TNFRSF1A-208ENST00000536194 PER1O15534 1290 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-208ENST00000536194 LARP1Q6PKG0 1096 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1A-208ENST00000536194 SPATA31A5Q5VU36 1347 aa15.58■□□□□ 0.08
TNFRSF1A-208ENST00000536194 SPATA31A7Q8IWB4 1347 aa15.58■□□□□ 0.08
TNFRSF1A-208ENST00000536194 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
TNFRSF1A-208ENST00000536194 SOCS7O14512 581 aa15.57■□□□□ 0.08
TNFRSF1A-208ENST00000536194 RRS1Q15050 365 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-208ENST00000536194 CCDC9Q9Y3X0 531 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-208ENST00000536194 SPATA31A1Q5TZJ5 1347 aa15.57■□□□□ 0.08
TNFRSF1A-208ENST00000536194 RGPD2P0DJD1 1756 aa15.57■□□□□ 0.08
TNFRSF1A-208ENST00000536194 AMER1Q5JTC6 1135 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-208ENST00000536194 CRB1P82279 1406 aa15.55■□□□□ 0.08
TNFRSF1A-208ENST00000536194 NSD2O96028 1365 aa15.55■□□□□ 0.08
TNFRSF1A-208ENST00000536194 EVA1CP58658 441 aa15.55■□□□□ 0.08
TNFRSF1A-208ENST00000536194 KNSTRNQ9Y448 316 aa15.55■□□□□ 0.08
TNFRSF1A-208ENST00000536194 FAM208AQ9UK61 1670 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-208ENST00000536194 BLMP54132 1417 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1A-208ENST00000536194 ERBB3P21860 1342 aa15.54■□□□□ 0.08
TNFRSF1A-208ENST00000536194 WDR17Q8IZU2 1322 aa15.54■□□□□ 0.08
TNFRSF1A-208ENST00000536194 ONECUT3O60422 494 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1A-208ENST00000536194 IP6K1Q92551 441 aa15.54■□□□□ 0.08
TNFRSF1A-208ENST00000536194 RTL1A6NKG5 1358 aa15.53■□□□□ 0.08
TNFRSF1A-208ENST00000536194 HOXC9P31274 260 aa15.53■□□□□ 0.08
TNFRSF1A-208ENST00000536194 USP35Q9P2H5 1018 aa15.53■□□□□ 0.08
TNFRSF1A-208ENST00000536194 AMPHP49418 695 aa15.52■□□□□ 0.08
TNFRSF1A-208ENST00000536194 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-208ENST00000536194 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.08
TNFRSF1A-208ENST00000536194 PARP4Q9UKK3 1724 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-208ENST00000536194 TNNT2P45379 298 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1A-208ENST00000536194 SEPT12Q8IYM1 358 aa15.51■□□□□ 0.07
TNFRSF1A-208ENST00000536194 LRRC37A3O60309 1634 aa15.5■□□□□ 0.07
TNFRSF1A-208ENST00000536194 TOM1L2Q6ZVM7 507 aa15.5■□□□□ 0.07
TNFRSF1A-208ENST00000536194 TCP11L2Q8N4U5 519 aa15.5■□□□□ 0.07
TNFRSF1A-208ENST00000536194 ANKRD24Q8TF21 1146 aa15.5■□□□□ 0.07
TNFRSF1A-208ENST00000536194 POLKQ9UBT6 870 aa15.5■□□□□ 0.07
TNFRSF1A-208ENST00000536194 FLT4P35916 1363 aa15.49■□□□□ 0.07
TNFRSF1A-208ENST00000536194 KIF24Q5T7B8 1368 aa15.49■□□□□ 0.07
TNFRSF1A-208ENST00000536194 NPC1L1Q9UHC9 1359 aa15.49■□□□□ 0.07
TNFRSF1A-208ENST00000536194 CSB-PGBD3P0DP91 1061 aa15.49■□□□□ 0.07
TNFRSF1A-208ENST00000536194 BARGINQ6ZT62 677 aa15.49■□□□□ 0.07
TNFRSF1A-208ENST00000536194 SMG6Q86US8 1419 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-208ENST00000536194 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
TNFRSF1A-208ENST00000536194 CC2D1BQ5T0F9 858 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-208ENST00000536194 MORC1Q86VD1 984 aa15.48■□□□□ 0.07
TNFRSF1A-208ENST00000536194 DISP2A7MBM2 1401 aa15.48■□□□□ 0.07
TNFRSF1A-208ENST00000536194 INSRP06213 1382 aa15.48■□□□□ 0.07
TNFRSF1A-208ENST00000536194 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-208ENST00000536194 CARD10Q9BWT7 1032 aa15.47■□□□□ 0.07
TNFRSF1A-208ENST00000536194 THRAP3Q9Y2W1 955 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-208ENST00000536194 PPM1GO15355 546 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-208ENST00000536194 A0A0G2JS52 829 aa15.45■□□□□ 0.06
TNFRSF1A-208ENST00000536194 MYT1Q01538 1121 aa15.45■□□□□ 0.06
TNFRSF1A-208ENST00000536194 NLRP2Q9NX02 1062 aa15.45■□□□□ 0.06
TNFRSF1A-208ENST00000536194 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-208ENST00000536194 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-208ENST00000536194 SHANK3Q9BYB0 1731 aa15.43■□□□□ 0.06
TNFRSF1A-208ENST00000536194 NBPF6Q5VWK0 638 aa15.42■□□□□ 0.06
TNFRSF1A-208ENST00000536194 KRT27Q7Z3Y8 459 aa15.42■□□□□ 0.06
TNFRSF1A-208ENST00000536194 NBPF4Q96M43 638 aa15.42■□□□□ 0.06
TNFRSF1A-208ENST00000536194 NCAPD2Q15021 1401 aa15.42■□□□□ 0.06
TNFRSF1A-208ENST00000536194 RGPD1P0DJD0 1748 aa15.41■□□□□ 0.06
TNFRSF1A-208ENST00000536194 FAM182BQ5T319 152 aa15.41■□□□□ 0.06
TNFRSF1A-208ENST00000536194 MEGF6O75095 1541 aa15.4■□□□□ 0.06
TNFRSF1A-208ENST00000536194 EIF4A2Q14240 407 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-208ENST00000536194 USHBP1Q8N6Y0 703 aa15.4■□□□□ 0.06
TNFRSF1A-208ENST00000536194 EP400Q96L91 3159 aa15.4■□□□□ 0.06
TNFRSF1A-208ENST00000536194 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
TNFRSF1A-208ENST00000536194 MTHFSP49914 203 aa15.39■□□□□ 0.05
TNFRSF1A-208ENST00000536194 UPF1Q92900 1129 aaKnown RBP eCLIP15.39■□□□□ 0.05
TNFRSF1A-208ENST00000536194 TNS2Q63HR2 1409 aa15.39■□□□□ 0.05
TNFRSF1A-208ENST00000536194 COL3A1P02461 1466 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1A-208ENST00000536194 IL2RBP14784 551 aa15.38■□□□□ 0.05
TNFRSF1A-208ENST00000536194 CDCA7Q9BWT1 371 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-208ENST00000536194 TNS1Q9HBL0 1735 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-208ENST00000536194 ZNF316A6NFI3 1004 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-208ENST00000536194 DDB1Q16531 1140 aa15.37■□□□□ 0.05
TNFRSF1A-208ENST00000536194 EYA1Q99502 592 aa15.37■□□□□ 0.05
TNFRSF1A-208ENST00000536194 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
TNFRSF1A-208ENST00000536194 PARD3Q8TEW0 1356 aa15.36■□□□□ 0.05
TNFRSF1A-208ENST00000536194 OVOS2A0A0G2JMS6 1433 aa15.36■□□□□ 0.05
TNFRSF1A-208ENST00000536194 PDE3BQ13370 1112 aa15.35■□□□□ 0.05
TNFRSF1A-208ENST00000536194 MARCH10Q8NA82 808 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-208ENST00000536194 IGSF1Q8N6C5 1336 aa15.35■□□□□ 0.05
TNFRSF1A-208ENST00000536194 PPP2R1AP30153 589 aa15.34■□□□□ 0.05
TNFRSF1A-208ENST00000536194 EXOC5O00471 708 aa15.33■□□□□ 0.04
TNFRSF1A-208ENST00000536194 IL13P35225 146 aa15.33■□□□□ 0.04
TNFRSF1A-208ENST00000536194 FAM196AQ6ZSG2 479 aa15.31■□□□□ 0.04
TNFRSF1A-208ENST00000536194 BCL9O00512 1426 aa15.31■□□□□ 0.04
TNFRSF1A-208ENST00000536194 NHSQ6T4R5 1651 aa15.3■□□□□ 0.04
TNFRSF1A-208ENST00000536194 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 1076.4 ms