RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 TCP11L2Q8N4U5 519 aa17.61■□□□□ 0.41
VPS37C-203ENST00000536000 C11orf95C9JLR9 678 aaPredicted RBP17.6■□□□□ 0.41
VPS37C-203ENST00000536000 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
VPS37C-203ENST00000536000 THRAP3Q9Y2W1 955 aaKnown RBP17.6■□□□□ 0.41
VPS37C-203ENST00000536000 LMO7Q8WWI1 1683 aa17.58■□□□□ 0.41
VPS37C-203ENST00000536000 COL5A2P05997 1499 aaPredicted RBP17.58■□□□□ 0.41
VPS37C-203ENST00000536000 PANK3Q9H999 370 aa17.58■□□□□ 0.4
VPS37C-203ENST00000536000 NFAT5O94916 1531 aa17.57■□□□□ 0.4
VPS37C-203ENST00000536000 OVOS2A0A0J9YW53 1432 aa17.57■□□□□ 0.4
VPS37C-203ENST00000536000 OVOS2Q6IE36 1432 aa17.57■□□□□ 0.4
VPS37C-203ENST00000536000 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
VPS37C-203ENST00000536000 FBLN1P23142 703 aa17.57■□□□□ 0.4
VPS37C-203ENST00000536000 CRB1P82279 1406 aa17.56■□□□□ 0.4
VPS37C-203ENST00000536000 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
VPS37C-203ENST00000536000 COL18A1P39060 1754 aa17.56■□□□□ 0.4
VPS37C-203ENST00000536000 AMPHP49418 695 aa17.56■□□□□ 0.4
VPS37C-203ENST00000536000 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
VPS37C-203ENST00000536000 IP6K1Q92551 441 aa17.56■□□□□ 0.4
VPS37C-203ENST00000536000 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
VPS37C-203ENST00000536000 PDE3BQ13370 1112 aa17.55■□□□□ 0.4
VPS37C-203ENST00000536000 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
VPS37C-203ENST00000536000 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
VPS37C-203ENST00000536000 BRWD3Q6RI45 1802 aa17.54■□□□□ 0.4
VPS37C-203ENST00000536000 MAP3K19Q56UN5 1328 aa17.53■□□□□ 0.4
VPS37C-203ENST00000536000 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
VPS37C-203ENST00000536000 NLRP2Q9NX02 1062 aa17.53■□□□□ 0.4
VPS37C-203ENST00000536000 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
VPS37C-203ENST00000536000 RRS1Q15050 365 aaKnown RBP17.52■□□□□ 0.4
VPS37C-203ENST00000536000 FAM182BQ5T319 152 aa17.52■□□□□ 0.4
VPS37C-203ENST00000536000 LTV1Q96GA3 475 aaPredicted RBP17.52■□□□□ 0.4
VPS37C-203ENST00000536000 RGPD5Q99666 1765 aa17.52■□□□□ 0.4
VPS37C-203ENST00000536000 MYOM1P52179 1685 aa17.52■□□□□ 0.39
VPS37C-203ENST00000536000 HOXC9P31274 260 aa17.51■□□□□ 0.39
VPS37C-203ENST00000536000 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
VPS37C-203ENST00000536000 CDCA7Q9BWT1 371 aaPredicted RBP17.51■□□□□ 0.39
VPS37C-203ENST00000536000 ERBB3P21860 1342 aa17.5■□□□□ 0.39
VPS37C-203ENST00000536000 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
VPS37C-203ENST00000536000 ABCC6O95255 1503 aa17.49■□□□□ 0.39
VPS37C-203ENST00000536000 DDB1Q16531 1140 aa17.49■□□□□ 0.39
VPS37C-203ENST00000536000 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
VPS37C-203ENST00000536000 CCDC7Q96M83 1385 aa17.49■□□□□ 0.39
VPS37C-203ENST00000536000 LTN1O94822 1766 aa17.48■□□□□ 0.39
VPS37C-203ENST00000536000 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
VPS37C-203ENST00000536000 EXOC5O00471 708 aa17.47■□□□□ 0.39
VPS37C-203ENST00000536000 THSD7AQ9UPZ6 1657 aa17.47■□□□□ 0.39
VPS37C-203ENST00000536000 PPM1GO15355 546 aaPredicted RBP17.46■□□□□ 0.39
VPS37C-203ENST00000536000 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
VPS37C-203ENST00000536000 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
VPS37C-203ENST00000536000 IL2RBP14784 551 aa17.44■□□□□ 0.38
VPS37C-203ENST00000536000 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
VPS37C-203ENST00000536000 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
VPS37C-203ENST00000536000 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
VPS37C-203ENST00000536000 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
VPS37C-203ENST00000536000 TRIM37O94972 964 aa17.43■□□□□ 0.38
VPS37C-203ENST00000536000 BAG6P46379 1132 aa17.42■□□□□ 0.38
VPS37C-203ENST00000536000 DEFB132Q7Z7B7 95 aa17.42■□□□□ 0.38
VPS37C-203ENST00000536000 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
VPS37C-203ENST00000536000 WASHC2AQ641Q2 1341 aa17.42■□□□□ 0.38
VPS37C-203ENST00000536000 FLT4P35916 1363 aa17.41■□□□□ 0.38
VPS37C-203ENST00000536000 KIF24Q5T7B8 1368 aa17.41■□□□□ 0.38
VPS37C-203ENST00000536000 NSD2O96028 1365 aa17.4■□□□□ 0.38
VPS37C-203ENST00000536000 INSRP06213 1382 aa17.4■□□□□ 0.38
VPS37C-203ENST00000536000 PER1O15534 1290 aaPredicted RBP17.4■□□□□ 0.38
VPS37C-203ENST00000536000 NBPF6Q5VWK0 638 aa17.4■□□□□ 0.38
VPS37C-203ENST00000536000 MARCH10Q8NA82 808 aaPredicted RBP17.4■□□□□ 0.38
VPS37C-203ENST00000536000 NBPF4Q96M43 638 aa17.4■□□□□ 0.38
VPS37C-203ENST00000536000 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
VPS37C-203ENST00000536000 DISP2A7MBM2 1401 aa17.38■□□□□ 0.37
VPS37C-203ENST00000536000 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
VPS37C-203ENST00000536000 PARP4Q9UKK3 1724 aaKnown RBP17.38■□□□□ 0.37
VPS37C-203ENST00000536000 MAP2P11137 1827 aaKnown RBP17.38■□□□□ 0.37
VPS37C-203ENST00000536000 APBA3O96018 575 aa17.37■□□□□ 0.37
VPS37C-203ENST00000536000 EN1Q05925 392 aaPredicted RBP17.36■□□□□ 0.37
VPS37C-203ENST00000536000 USHBP1Q8N6Y0 703 aa17.36■□□□□ 0.37
VPS37C-203ENST00000536000 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
VPS37C-203ENST00000536000 CC2D1BQ5T0F9 858 aaKnown RBP17.35■□□□□ 0.37
VPS37C-203ENST00000536000 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
VPS37C-203ENST00000536000 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
VPS37C-203ENST00000536000 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
VPS37C-203ENST00000536000 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
VPS37C-203ENST00000536000 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
VPS37C-203ENST00000536000 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
VPS37C-203ENST00000536000 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.36
VPS37C-203ENST00000536000 PEAK1Q9H792 1746 aa17.33■□□□□ 0.36
VPS37C-203ENST00000536000 ANKRD26Q9UPS8 1709 aa17.33■□□□□ 0.36
VPS37C-203ENST00000536000 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
VPS37C-203ENST00000536000 LRRC37A3O60309 1634 aa17.32■□□□□ 0.36
VPS37C-203ENST00000536000 EYA1Q99502 592 aa17.32■□□□□ 0.36
VPS37C-203ENST00000536000 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
VPS37C-203ENST00000536000 WNK3Q9BYP7 1800 aa17.32■□□□□ 0.36
VPS37C-203ENST00000536000 TNS2Q63HR2 1409 aa17.31■□□□□ 0.36
VPS37C-203ENST00000536000 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
VPS37C-203ENST00000536000 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
VPS37C-203ENST00000536000 EZH2Q15910 746 aaKnown RBP17.31■□□□□ 0.36
VPS37C-203ENST00000536000 CAMKK2Q96RR4 588 aa17.31■□□□□ 0.36
VPS37C-203ENST00000536000 RGPD1P0DJD0 1748 aa17.3■□□□□ 0.36
VPS37C-203ENST00000536000 BCL9O00512 1426 aa17.3■□□□□ 0.36
VPS37C-203ENST00000536000 ACSBG1Q96GR2 724 aa17.29■□□□□ 0.36
VPS37C-203ENST00000536000 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
VPS37C-203ENST00000536000 MTHFSP49914 203 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms