RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
VAMP1-204ENST00000535180 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-204ENST00000535180 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
VAMP1-204ENST00000535180 MARCH10Q8NA82 808 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-204ENST00000535180 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-204ENST00000535180 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
VAMP1-204ENST00000535180 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
VAMP1-204ENST00000535180 MINK1Q8N4C8 1332 aaPredicted RBP16.13■□□□□ 0.17
VAMP1-204ENST00000535180 KAT6BQ8WYB5 2073 aa16.12■□□□□ 0.17
VAMP1-204ENST00000535180 YBX3P16989 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
VAMP1-204ENST00000535180 NLGN2Q8NFZ4 835 aa16.1■□□□□ 0.17
VAMP1-204ENST00000535180 NHSQ6T4R5 1651 aa16.09■□□□□ 0.17
VAMP1-204ENST00000535180 POLD1P28340 1107 aa16.09■□□□□ 0.17
VAMP1-204ENST00000535180 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
VAMP1-204ENST00000535180 SLC16A10Q8TF71 515 aa16.09■□□□□ 0.17
VAMP1-204ENST00000535180 USP19O94966 1318 aa16.09■□□□□ 0.17
VAMP1-204ENST00000535180 CDCA7Q9BWT1 371 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-204ENST00000535180 GCP02774 474 aa16.07■□□□□ 0.16
VAMP1-204ENST00000535180 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
VAMP1-204ENST00000535180 POLR3AO14802 1390 aaPredicted RBP16.07■□□□□ 0.16
VAMP1-204ENST00000535180 ADGRB1O14514 1584 aa16.07■□□□□ 0.16
VAMP1-204ENST00000535180 BTAF1O14981 1849 aa16.06■□□□□ 0.16
VAMP1-204ENST00000535180 COL18A1P39060 1754 aa16.06■□□□□ 0.16
VAMP1-204ENST00000535180 ADCY9O60503 1353 aa16.06■□□□□ 0.16
VAMP1-204ENST00000535180 CAPN15O75808 1086 aa16.06■□□□□ 0.16
VAMP1-204ENST00000535180 APLP1P51693 650 aa16.06■□□□□ 0.16
VAMP1-204ENST00000535180 TOM1L2Q6ZVM7 507 aa16.06■□□□□ 0.16
VAMP1-204ENST00000535180 DNAJC5GQ8N7S2 189 aa16.06■□□□□ 0.16
VAMP1-204ENST00000535180 TRAK1Q9UPV9 953 aa16.06■□□□□ 0.16
VAMP1-204ENST00000535180 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
VAMP1-204ENST00000535180 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
VAMP1-204ENST00000535180 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
VAMP1-204ENST00000535180 COL13A1Q5TAT6 717 aaPredicted RBP16.05■□□□□ 0.16
VAMP1-204ENST00000535180 ACEP12821 1306 aa16.04■□□□□ 0.16
VAMP1-204ENST00000535180 PRELPP51888 382 aa16.04■□□□□ 0.16
VAMP1-204ENST00000535180 NLRP13Q86W25 1043 aa16.04■□□□□ 0.16
VAMP1-204ENST00000535180 ZNF526Q8TF50 670 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-204ENST00000535180 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
VAMP1-204ENST00000535180 EXOC5O00471 708 aa16.01■□□□□ 0.15
VAMP1-204ENST00000535180 ARHGEF28Q8N1W1 1705 aaKnown RBP16.01■□□□□ 0.15
VAMP1-204ENST00000535180 KIF3CO14782 793 aa16■□□□□ 0.15
VAMP1-204ENST00000535180 AKT1S1Q96B36 256 aa16■□□□□ 0.15
VAMP1-204ENST00000535180 WDR90Q96KV7 1748 aa15.99■□□□□ 0.15
VAMP1-204ENST00000535180 PLEKHG3A1L390 1219 aa15.99■□□□□ 0.15
VAMP1-204ENST00000535180 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
VAMP1-204ENST00000535180 LRRC4BQ9NT99 713 aa15.99■□□□□ 0.15
VAMP1-204ENST00000535180 PNPLA7Q6ZV29 1317 aa15.98■□□□□ 0.15
VAMP1-204ENST00000535180 SLC34A2O95436 690 aa15.98■□□□□ 0.15
VAMP1-204ENST00000535180 TNS4Q8IZW8 715 aa15.98■□□□□ 0.15
VAMP1-204ENST00000535180 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
VAMP1-204ENST00000535180 BRD4O60885 1362 aaPredicted RBP15.97■□□□□ 0.15
VAMP1-204ENST00000535180 USP6P35125 1406 aa15.96■□□□□ 0.15
VAMP1-204ENST00000535180 SLIT3O75094 1523 aa15.96■□□□□ 0.15
VAMP1-204ENST00000535180 ACSBG1Q96GR2 724 aa15.96■□□□□ 0.15
VAMP1-204ENST00000535180 CARD10Q9BWT7 1032 aa15.96■□□□□ 0.15
VAMP1-204ENST00000535180 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
VAMP1-204ENST00000535180 AXIN2Q9Y2T1 843 aa15.96■□□□□ 0.15
VAMP1-204ENST00000535180 TNS2Q63HR2 1409 aa15.95■□□□□ 0.14
VAMP1-204ENST00000535180 TRPM1Q7Z4N2 1603 aa15.95■□□□□ 0.14
VAMP1-204ENST00000535180 MPHOSPH9Q99550 1183 aa15.94■□□□□ 0.14
VAMP1-204ENST00000535180 ABCC6O95255 1503 aa15.94■□□□□ 0.14
VAMP1-204ENST00000535180 SLC27A3Q5K4L6 730 aa15.93■□□□□ 0.14
VAMP1-204ENST00000535180 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
VAMP1-204ENST00000535180 TFCP2L1Q9NZI6 479 aa15.93■□□□□ 0.14
VAMP1-204ENST00000535180 TOMM70O94826 608 aa15.92■□□□□ 0.14
VAMP1-204ENST00000535180 PCNTO95613 3336 aa15.91■□□□□ 0.14
VAMP1-204ENST00000535180 NLRP6P59044 892 aa15.91■□□□□ 0.14
VAMP1-204ENST00000535180 CCDC7Q96M83 1385 aa15.9■□□□□ 0.14
VAMP1-204ENST00000535180 KLRG1Q96E93 195 aa15.9■□□□□ 0.14
VAMP1-204ENST00000535180 CD2APQ9Y5K6 639 aa15.9■□□□□ 0.14
VAMP1-204ENST00000535180 LY75O60449 1722 aa15.9■□□□□ 0.14
VAMP1-204ENST00000535180 CPSF1Q10570 1443 aaKnown RBP15.89■□□□□ 0.13
VAMP1-204ENST00000535180 CSB-PGBD3P0DP91 1061 aa15.89■□□□□ 0.13
VAMP1-204ENST00000535180 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
VAMP1-204ENST00000535180 PIK3C2AO00443 1686 aa15.87■□□□□ 0.13
VAMP1-204ENST00000535180 ARHGEF25Q86VW2 580 aa15.87■□□□□ 0.13
VAMP1-204ENST00000535180 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
VAMP1-204ENST00000535180 MSH5O43196 834 aa15.83■□□□□ 0.12
VAMP1-204ENST00000535180 KCNQ4P56696 695 aa15.83■□□□□ 0.12
VAMP1-204ENST00000535180 COL23A1Q86Y22 540 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-204ENST00000535180 PCDH10Q9P2E7 1040 aa15.83■□□□□ 0.12
VAMP1-204ENST00000535180 HTRA3P83110 453 aa15.82■□□□□ 0.12
VAMP1-204ENST00000535180 WWC3Q9ULE0 1092 aa15.82■□□□□ 0.12
VAMP1-204ENST00000535180 CICQ96RK0 1608 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-204ENST00000535180 QRICH2Q9H0J4 1663 aa15.82■□□□□ 0.12
VAMP1-204ENST00000535180 MSL1Q68DK7 614 aa15.81■□□□□ 0.12
VAMP1-204ENST00000535180 KCNH5Q8NCM2 988 aa15.81■□□□□ 0.12
VAMP1-204ENST00000535180 IL2RBP14784 551 aa15.8■□□□□ 0.12
VAMP1-204ENST00000535180 RBM46Q8TBY0 533 aaKnown RBP15.8■□□□□ 0.12
VAMP1-204ENST00000535180 KDM2AQ9Y2K7 1162 aa15.8■□□□□ 0.12
VAMP1-204ENST00000535180 IGSF1Q8N6C5 1336 aa15.79■□□□□ 0.12
VAMP1-204ENST00000535180 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
VAMP1-204ENST00000535180 DCAF11Q8TEB1 546 aa15.78■□□□□ 0.12
VAMP1-204ENST00000535180 DOT1LQ8TEK3 1739 aa15.77■□□□□ 0.12
VAMP1-204ENST00000535180 STAC3Q96MF2 364 aa15.77■□□□□ 0.12
VAMP1-204ENST00000535180 NMRK2Q9NPI5 230 aa15.77■□□□□ 0.12
VAMP1-204ENST00000535180 NFAT5O94916 1531 aa15.77■□□□□ 0.11
VAMP1-204ENST00000535180 TAF1LQ8IZX4 1826 aa15.77■□□□□ 0.11
VAMP1-204ENST00000535180 C5P01031 1676 aa15.76■□□□□ 0.11
VAMP1-204ENST00000535180 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms