RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 NLRP6P59044 892 aa12.29□□□□□ -0.44
NCAM1-218ENST00000534516 CCDC9Q9Y3X0 531 aaKnown RBP12.29□□□□□ -0.44
NCAM1-218ENST00000534516 KTN1Q86UP2 1357 aaKnown RBP12.29□□□□□ -0.44
NCAM1-218ENST00000534516 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
NCAM1-218ENST00000534516 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
NCAM1-218ENST00000534516 SLIT3O75094 1523 aa12.28□□□□□ -0.44
NCAM1-218ENST00000534516 GCP02774 474 aa12.28□□□□□ -0.44
NCAM1-218ENST00000534516 NLRP13Q86W25 1043 aa12.28□□□□□ -0.44
NCAM1-218ENST00000534516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.28□□□□□ -0.44
NCAM1-218ENST00000534516 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
NCAM1-218ENST00000534516 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
NCAM1-218ENST00000534516 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
NCAM1-218ENST00000534516 RGPD5Q99666 1765 aa12.27□□□□□ -0.45
NCAM1-218ENST00000534516 BRD4O60885 1362 aaPredicted RBP12.27□□□□□ -0.45
NCAM1-218ENST00000534516 COL18A1P39060 1754 aa12.26□□□□□ -0.45
NCAM1-218ENST00000534516 SOX12O15370 315 aa12.26□□□□□ -0.45
NCAM1-218ENST00000534516 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
NCAM1-218ENST00000534516 NME9Q86XW9 330 aa12.26□□□□□ -0.45
NCAM1-218ENST00000534516 SP7Q8TDD2 431 aaPredicted RBP12.26□□□□□ -0.45
NCAM1-218ENST00000534516 A0A1W2PP64 1363 aa12.26□□□□□ -0.45
NCAM1-218ENST00000534516 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
NCAM1-218ENST00000534516 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
NCAM1-218ENST00000534516 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
NCAM1-218ENST00000534516 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
NCAM1-218ENST00000534516 CPDO75976 1380 aa12.25□□□□□ -0.45
NCAM1-218ENST00000534516 ONECUT3O60422 494 aaPredicted RBP12.24□□□□□ -0.45
NCAM1-218ENST00000534516 LARP1Q6PKG0 1096 aaKnown RBP12.24□□□□□ -0.45
NCAM1-218ENST00000534516 NFAT5O94916 1531 aa12.23□□□□□ -0.45
NCAM1-218ENST00000534516 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
NCAM1-218ENST00000534516 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
NCAM1-218ENST00000534516 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
NCAM1-218ENST00000534516 AXIN2Q9Y2T1 843 aa12.23□□□□□ -0.45
NCAM1-218ENST00000534516 MYOM1P52179 1685 aa12.22□□□□□ -0.45
NCAM1-218ENST00000534516 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
NCAM1-218ENST00000534516 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
NCAM1-218ENST00000534516 TMF1P82094 1093 aa12.22□□□□□ -0.45
NCAM1-218ENST00000534516 FAM182BQ5T319 152 aa12.22□□□□□ -0.45
NCAM1-218ENST00000534516 HDGFL2Q7Z4V5 671 aaPredicted RBP12.22□□□□□ -0.45
NCAM1-218ENST00000534516 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
NCAM1-218ENST00000534516 COL5A2P05997 1499 aaPredicted RBP12.21□□□□□ -0.45
NCAM1-218ENST00000534516 EDC4Q6P2E9 1401 aaKnown RBP12.21□□□□□ -0.45
NCAM1-218ENST00000534516 LTN1O94822 1766 aa12.21□□□□□ -0.45
NCAM1-218ENST00000534516 A0A0G2JS52 829 aa12.21□□□□□ -0.45
NCAM1-218ENST00000534516 EVA1CP58658 441 aa12.21□□□□□ -0.45
NCAM1-218ENST00000534516 MYT1Q01538 1121 aa12.21□□□□□ -0.45
NCAM1-218ENST00000534516 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
NCAM1-218ENST00000534516 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
NCAM1-218ENST00000534516 TERF2IPQ9NYB0 399 aa12.2□□□□□ -0.46
NCAM1-218ENST00000534516 AATKQ6ZMQ8 1374 aa12.19□□□□□ -0.46
NCAM1-218ENST00000534516 HSPA5P11021 654 aaKnown RBP12.19□□□□□ -0.46
NCAM1-218ENST00000534516 FBLN1P23142 703 aa12.19□□□□□ -0.46
NCAM1-218ENST00000534516 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
NCAM1-218ENST00000534516 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
NCAM1-218ENST00000534516 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
NCAM1-218ENST00000534516 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
NCAM1-218ENST00000534516 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
NCAM1-218ENST00000534516 EVX2Q03828 476 aa12.17□□□□□ -0.46
NCAM1-218ENST00000534516 KCNH5Q8NCM2 988 aa12.17□□□□□ -0.46
NCAM1-218ENST00000534516 CARD14Q9BXL6 1004 aa12.17□□□□□ -0.46
NCAM1-218ENST00000534516 WNK3Q9BYP7 1800 aa12.16□□□□□ -0.46
NCAM1-218ENST00000534516 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
NCAM1-218ENST00000534516 POLR3GLQ9BT43 218 aa12.16□□□□□ -0.46
NCAM1-218ENST00000534516 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
NCAM1-218ENST00000534516 CRB1P82279 1406 aa12.15□□□□□ -0.46
NCAM1-218ENST00000534516 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
NCAM1-218ENST00000534516 EIF4G2P78344 907 aaKnown RBP eCLIP12.15□□□□□ -0.46
NCAM1-218ENST00000534516 BARGINQ6ZT62 677 aa12.15□□□□□ -0.46
NCAM1-218ENST00000534516 TCP11L2Q8N4U5 519 aa12.15□□□□□ -0.46
NCAM1-218ENST00000534516 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
NCAM1-218ENST00000534516 FYB1O15117 783 aa12.14□□□□□ -0.47
NCAM1-218ENST00000534516 TOM1L2Q6ZVM7 507 aa12.14□□□□□ -0.47
NCAM1-218ENST00000534516 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
NCAM1-218ENST00000534516 GGNBP2Q9H3C7 697 aa12.14□□□□□ -0.47
NCAM1-218ENST00000534516 WDR17Q8IZU2 1322 aa12.13□□□□□ -0.47
NCAM1-218ENST00000534516 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
NCAM1-218ENST00000534516 LRRC37A3O60309 1634 aa12.13□□□□□ -0.47
NCAM1-218ENST00000534516 BLMP54132 1417 aaPredicted RBP12.12□□□□□ -0.47
NCAM1-218ENST00000534516 C19orf67A6NJJ6 358 aa12.12□□□□□ -0.47
NCAM1-218ENST00000534516 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
NCAM1-218ENST00000534516 CDCA8Q53HL2 280 aa12.12□□□□□ -0.47
NCAM1-218ENST00000534516 COG3Q96JB2 828 aa12.12□□□□□ -0.47
NCAM1-218ENST00000534516 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
NCAM1-218ENST00000534516 TNS1Q9HBL0 1735 aaKnown RBP12.11□□□□□ -0.47
NCAM1-218ENST00000534516 THRAP3Q9Y2W1 955 aaKnown RBP12.11□□□□□ -0.47
NCAM1-218ENST00000534516 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
NCAM1-218ENST00000534516 ABCC6O95255 1503 aa12.11□□□□□ -0.47
NCAM1-218ENST00000534516 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
NCAM1-218ENST00000534516 RRS1Q15050 365 aaKnown RBP12.1□□□□□ -0.47
NCAM1-218ENST00000534516 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
NCAM1-218ENST00000534516 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
NCAM1-218ENST00000534516 CARD10Q9BWT7 1032 aa12.1□□□□□ -0.47
NCAM1-218ENST00000534516 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
NCAM1-218ENST00000534516 ERBB3P21860 1342 aa12.1□□□□□ -0.47
NCAM1-218ENST00000534516 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
NCAM1-218ENST00000534516 CCDC125Q86Z20 511 aa12.09□□□□□ -0.47
NCAM1-218ENST00000534516 DISP2A7MBM2 1401 aa12.09□□□□□ -0.47
NCAM1-218ENST00000534516 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
NCAM1-218ENST00000534516 TRIM37O94972 964 aa12.08□□□□□ -0.48
NCAM1-218ENST00000534516 HOXC9P31274 260 aa12.08□□□□□ -0.48
NCAM1-218ENST00000534516 IP6K1Q92551 441 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms