RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
SHARPIN-210ENST00000534435 GCP02774 474 aa12.37□□□□□ -0.43
SHARPIN-210ENST00000534435 EIF3AQ14152 1382 aaKnown RBP12.37□□□□□ -0.43
SHARPIN-210ENST00000534435 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHARPIN-210ENST00000534435 TOM1L2Q6ZVM7 507 aa12.35□□□□□ -0.43
SHARPIN-210ENST00000534435 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
SHARPIN-210ENST00000534435 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
SHARPIN-210ENST00000534435 AXIN2Q9Y2T1 843 aa12.35□□□□□ -0.43
SHARPIN-210ENST00000534435 RGPD3A6NKT7 1758 aaPredicted RBP12.35□□□□□ -0.43
SHARPIN-210ENST00000534435 RGPD4Q7Z3J3 1758 aa12.35□□□□□ -0.43
SHARPIN-210ENST00000534435 POLR3AO14802 1390 aaPredicted RBP12.34□□□□□ -0.43
SHARPIN-210ENST00000534435 MAP3K5Q99683 1374 aa12.34□□□□□ -0.43
SHARPIN-210ENST00000534435 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
SHARPIN-210ENST00000534435 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
SHARPIN-210ENST00000534435 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
SHARPIN-210ENST00000534435 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
SHARPIN-210ENST00000534435 LRRC4BQ9NT99 713 aa12.32□□□□□ -0.44
SHARPIN-210ENST00000534435 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
SHARPIN-210ENST00000534435 KCNQ4P56696 695 aa12.31□□□□□ -0.44
SHARPIN-210ENST00000534435 SBF2Q86WG5 1849 aa12.3□□□□□ -0.44
SHARPIN-210ENST00000534435 HSPA6P17066 643 aa12.3□□□□□ -0.44
SHARPIN-210ENST00000534435 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
SHARPIN-210ENST00000534435 SOX12O15370 315 aa12.29□□□□□ -0.44
SHARPIN-210ENST00000534435 NLRP13Q86W25 1043 aa12.29□□□□□ -0.44
SHARPIN-210ENST00000534435 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
SHARPIN-210ENST00000534435 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
SHARPIN-210ENST00000534435 BCL9O00512 1426 aa12.28□□□□□ -0.44
SHARPIN-210ENST00000534435 CAPN15O75808 1086 aa12.28□□□□□ -0.44
SHARPIN-210ENST00000534435 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
SHARPIN-210ENST00000534435 CHD4Q14839 1912 aa12.28□□□□□ -0.44
SHARPIN-210ENST00000534435 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
SHARPIN-210ENST00000534435 NLRP6P59044 892 aa12.27□□□□□ -0.45
SHARPIN-210ENST00000534435 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
SHARPIN-210ENST00000534435 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
SHARPIN-210ENST00000534435 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
SHARPIN-210ENST00000534435 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
SHARPIN-210ENST00000534435 AKT1S1Q96B36 256 aa12.26□□□□□ -0.45
SHARPIN-210ENST00000534435 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
SHARPIN-210ENST00000534435 EXOC5O00471 708 aa12.25□□□□□ -0.45
SHARPIN-210ENST00000534435 GPBP1L1Q9HC44 474 aaPredicted RBP12.25□□□□□ -0.45
SHARPIN-210ENST00000534435 CABP2Q9NPB3 220 aa12.25□□□□□ -0.45
SHARPIN-210ENST00000534435 PPIP5K1Q6PFW1 1433 aa12.25□□□□□ -0.45
SHARPIN-210ENST00000534435 SLIT3O75094 1523 aa12.24□□□□□ -0.45
SHARPIN-210ENST00000534435 POLD1P28340 1107 aa12.24□□□□□ -0.45
SHARPIN-210ENST00000534435 CARD10Q9BWT7 1032 aa12.24□□□□□ -0.45
SHARPIN-210ENST00000534435 ITSN1Q15811 1721 aa12.23□□□□□ -0.45
SHARPIN-210ENST00000534435 USP6P35125 1406 aa12.23□□□□□ -0.45
SHARPIN-210ENST00000534435 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
SHARPIN-210ENST00000534435 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
SHARPIN-210ENST00000534435 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
SHARPIN-210ENST00000534435 ARHGEF28Q8N1W1 1705 aaKnown RBP12.23□□□□□ -0.45
SHARPIN-210ENST00000534435 BRD4O60885 1362 aaPredicted RBP12.22□□□□□ -0.45
SHARPIN-210ENST00000534435 SRPK2P78362 688 aaKnown RBP12.22□□□□□ -0.45
SHARPIN-210ENST00000534435 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
SHARPIN-210ENST00000534435 ADCY9O60503 1353 aa12.21□□□□□ -0.45
SHARPIN-210ENST00000534435 COL18A1P39060 1754 aa12.21□□□□□ -0.45
SHARPIN-210ENST00000534435 COL13A1Q5TAT6 717 aaPredicted RBP12.21□□□□□ -0.45
SHARPIN-210ENST00000534435 ARHGEF25Q86VW2 580 aa12.21□□□□□ -0.45
SHARPIN-210ENST00000534435 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
SHARPIN-210ENST00000534435 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.46
SHARPIN-210ENST00000534435 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
SHARPIN-210ENST00000534435 GRIN3BO60391 1043 aa12.2□□□□□ -0.46
SHARPIN-210ENST00000534435 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
SHARPIN-210ENST00000534435 KIF3CO14782 793 aa12.19□□□□□ -0.46
SHARPIN-210ENST00000534435 MSH5O43196 834 aa12.19□□□□□ -0.46
SHARPIN-210ENST00000534435 HTRA3P83110 453 aa12.19□□□□□ -0.46
SHARPIN-210ENST00000534435 AKAP12Q02952 1782 aa12.18□□□□□ -0.46
SHARPIN-210ENST00000534435 DNAJC5GQ8N7S2 189 aa12.18□□□□□ -0.46
SHARPIN-210ENST00000534435 SLC16A10Q8TF71 515 aa12.18□□□□□ -0.46
SHARPIN-210ENST00000534435 PIK3C2AO00443 1686 aa12.17□□□□□ -0.46
SHARPIN-210ENST00000534435 NBPF1Q3BBV0 1214 aa12.17□□□□□ -0.46
SHARPIN-210ENST00000534435 COL23A1Q86Y22 540 aaPredicted RBP12.17□□□□□ -0.46
SHARPIN-210ENST00000534435 NLRP2Q9NX02 1062 aa12.16□□□□□ -0.46
SHARPIN-210ENST00000534435 CCDC7Q96M83 1385 aa12.16□□□□□ -0.46
SHARPIN-210ENST00000534435 ABCC6O95255 1503 aa12.16□□□□□ -0.46
SHARPIN-210ENST00000534435 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.47
SHARPIN-210ENST00000534435 BTAF1O14981 1849 aa12.14□□□□□ -0.47
SHARPIN-210ENST00000534435 SMIM5Q71RC9 77 aa12.14□□□□□ -0.47
SHARPIN-210ENST00000534435 DDX54Q8TDD1 881 aaKnown RBP12.14□□□□□ -0.47
SHARPIN-210ENST00000534435 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
SHARPIN-210ENST00000534435 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
SHARPIN-210ENST00000534435 NFAT5O94916 1531 aa12.13□□□□□ -0.47
SHARPIN-210ENST00000534435 IL2RBP14784 551 aa12.13□□□□□ -0.47
SHARPIN-210ENST00000534435 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
SHARPIN-210ENST00000534435 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
SHARPIN-210ENST00000534435 APLP1P51693 650 aa12.12□□□□□ -0.47
SHARPIN-210ENST00000534435 NSD2O96028 1365 aa12.12□□□□□ -0.47
SHARPIN-210ENST00000534435 ERBB3P21860 1342 aa12.11□□□□□ -0.47
SHARPIN-210ENST00000534435 COL24A1Q17RW2 1714 aa12.11□□□□□ -0.47
SHARPIN-210ENST00000534435 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
SHARPIN-210ENST00000534435 TUBGCP6Q96RT7 1819 aa12.11□□□□□ -0.47
SHARPIN-210ENST00000534435 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
SHARPIN-210ENST00000534435 AMIGO3Q86WK7 504 aa12.1□□□□□ -0.47
SHARPIN-210ENST00000534435 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
SHARPIN-210ENST00000534435 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
SHARPIN-210ENST00000534435 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
SHARPIN-210ENST00000534435 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
SHARPIN-210ENST00000534435 NMRK2Q9NPI5 230 aa12.09□□□□□ -0.47
SHARPIN-210ENST00000534435 IGSF1Q8N6C5 1336 aa12.09□□□□□ -0.47
SHARPIN-210ENST00000534435 CD2APQ9Y5K6 639 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms