RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 EDC4Q6P2E9 1401 aaKnown RBP19.84■□□□□ 0.77
SF3B2-215ENST00000534307 A0A1W2PP64 1363 aa19.83■□□□□ 0.77
SF3B2-215ENST00000534307 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.77
SF3B2-215ENST00000534307 YY1P25490 414 aa19.83■□□□□ 0.77
SF3B2-215ENST00000534307 ARHGEF25Q86VW2 580 aa19.83■□□□□ 0.77
SF3B2-215ENST00000534307 KCNH5Q8NCM2 988 aa19.83■□□□□ 0.77
SF3B2-215ENST00000534307 TMC1Q8TDI8 760 aa19.83■□□□□ 0.77
SF3B2-215ENST00000534307 SLC24A1O60721 1099 aa19.82■□□□□ 0.76
SF3B2-215ENST00000534307 CRB1P82279 1406 aa19.82■□□□□ 0.76
SF3B2-215ENST00000534307 PARD3Q8TEW0 1356 aa19.82■□□□□ 0.76
SF3B2-215ENST00000534307 USP35Q9P2H5 1018 aa19.81■□□□□ 0.76
SF3B2-215ENST00000534307 AXIN2Q9Y2T1 843 aa19.81■□□□□ 0.76
SF3B2-215ENST00000534307 ABCC6O95255 1503 aa19.81■□□□□ 0.76
SF3B2-215ENST00000534307 HDGFL2Q7Z4V5 671 aaPredicted RBP19.8■□□□□ 0.76
SF3B2-215ENST00000534307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.8■□□□□ 0.76
SF3B2-215ENST00000534307 TCP11L2Q8N4U5 519 aa19.8■□□□□ 0.76
SF3B2-215ENST00000534307 TERF2IPQ9NYB0 399 aa19.8■□□□□ 0.76
SF3B2-215ENST00000534307 RGPD5Q99666 1765 aa19.8■□□□□ 0.76
SF3B2-215ENST00000534307 PARP4Q9UKK3 1724 aaKnown RBP19.79■□□□□ 0.76
SF3B2-215ENST00000534307 TRIM37O94972 964 aa19.79■□□□□ 0.76
SF3B2-215ENST00000534307 NME9Q86XW9 330 aa19.79■□□□□ 0.76
SF3B2-215ENST00000534307 THRAP3Q9Y2W1 955 aaKnown RBP19.79■□□□□ 0.76
SF3B2-215ENST00000534307 OVOS2A0A0J9YW53 1432 aa19.78■□□□□ 0.76
SF3B2-215ENST00000534307 OVOS2Q6IE36 1432 aa19.78■□□□□ 0.76
SF3B2-215ENST00000534307 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.76
SF3B2-215ENST00000534307 RGPD3A6NKT7 1758 aaPredicted RBP19.76■□□□□ 0.75
SF3B2-215ENST00000534307 RGPD4Q7Z3J3 1758 aa19.76■□□□□ 0.75
SF3B2-215ENST00000534307 SOX12O15370 315 aa19.76■□□□□ 0.75
SF3B2-215ENST00000534307 WNK3Q9BYP7 1800 aa19.76■□□□□ 0.75
SF3B2-215ENST00000534307 WDR17Q8IZU2 1322 aa19.76■□□□□ 0.75
SF3B2-215ENST00000534307 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
SF3B2-215ENST00000534307 SBF2Q86WG5 1849 aa19.75■□□□□ 0.75
SF3B2-215ENST00000534307 LTN1O94822 1766 aa19.75■□□□□ 0.75
SF3B2-215ENST00000534307 LRRC37A3O60309 1634 aa19.74■□□□□ 0.75
SF3B2-215ENST00000534307 TMF1P82094 1093 aa19.74■□□□□ 0.75
SF3B2-215ENST00000534307 FAM196AQ6ZSG2 479 aa19.74■□□□□ 0.75
SF3B2-215ENST00000534307 CASZ1Q86V15 1759 aa19.74■□□□□ 0.75
SF3B2-215ENST00000534307 APBA3O96018 575 aa19.73■□□□□ 0.75
SF3B2-215ENST00000534307 MYOM1P52179 1685 aa19.71■□□□□ 0.75
SF3B2-215ENST00000534307 PEAK1Q9H792 1746 aa19.71■□□□□ 0.75
SF3B2-215ENST00000534307 TOM1L2Q6ZVM7 507 aa19.71■□□□□ 0.75
SF3B2-215ENST00000534307 PDE3BQ13370 1112 aa19.7■□□□□ 0.74
SF3B2-215ENST00000534307 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
SF3B2-215ENST00000534307 CARD10Q9BWT7 1032 aa19.69■□□□□ 0.74
SF3B2-215ENST00000534307 ERBB3P21860 1342 aa19.68■□□□□ 0.74
SF3B2-215ENST00000534307 CHD4Q14839 1912 aa19.67■□□□□ 0.74
SF3B2-215ENST00000534307 CDCA8Q53HL2 280 aa19.67■□□□□ 0.74
SF3B2-215ENST00000534307 CDCA7Q9BWT1 371 aaPredicted RBP19.65■□□□□ 0.74
SF3B2-215ENST00000534307 SPON1Q9HCB6 807 aa19.65■□□□□ 0.74
SF3B2-215ENST00000534307 PPP1R1BQ9UD71 204 aaPredicted RBP19.65■□□□□ 0.74
SF3B2-215ENST00000534307 CCDC7Q96M83 1385 aa19.65■□□□□ 0.74
SF3B2-215ENST00000534307 OVOS2A0A0G2JMS6 1433 aa19.65■□□□□ 0.74
SF3B2-215ENST00000534307 CSB-PGBD3P0DP91 1061 aa19.64■□□□□ 0.73
SF3B2-215ENST00000534307 NBPF14Q5TI25 921 aa19.64■□□□□ 0.73
SF3B2-215ENST00000534307 FYB1O15117 783 aa19.63■□□□□ 0.73
SF3B2-215ENST00000534307 KCNQ2O43526 872 aa19.63■□□□□ 0.73
SF3B2-215ENST00000534307 DDB1Q16531 1140 aa19.63■□□□□ 0.73
SF3B2-215ENST00000534307 COG3Q96JB2 828 aa19.63■□□□□ 0.73
SF3B2-215ENST00000534307 KIF20BQ96Q89 1820 aa19.62■□□□□ 0.73
SF3B2-215ENST00000534307 BCL9O00512 1426 aa19.62■□□□□ 0.73
SF3B2-215ENST00000534307 GOLGB1Q14789 3259 aaKnown RBP19.61■□□□□ 0.73
SF3B2-215ENST00000534307 MAP3K19Q56UN5 1328 aa19.61■□□□□ 0.73
SF3B2-215ENST00000534307 C11orf95C9JLR9 678 aaPredicted RBP19.61■□□□□ 0.73
SF3B2-215ENST00000534307 ANKRD24Q8TF21 1146 aa19.61■□□□□ 0.73
SF3B2-215ENST00000534307 IP6K1Q92551 441 aa19.61■□□□□ 0.73
SF3B2-215ENST00000534307 FAM208AQ9UK61 1670 aaKnown RBP19.61■□□□□ 0.73
SF3B2-215ENST00000534307 MARCH10Q8NA82 808 aaPredicted RBP19.6■□□□□ 0.73
SF3B2-215ENST00000534307 CARD14Q9BXL6 1004 aa19.6■□□□□ 0.73
SF3B2-215ENST00000534307 TNS2Q63HR2 1409 aa19.59■□□□□ 0.73
SF3B2-215ENST00000534307 CEP350Q5VT06 3117 aa19.59■□□□□ 0.73
SF3B2-215ENST00000534307 FBLN1P23142 703 aa19.59■□□□□ 0.73
SF3B2-215ENST00000534307 GGNBP2Q9H3C7 697 aa19.58■□□□□ 0.72
SF3B2-215ENST00000534307 NLRP2Q9NX02 1062 aa19.58■□□□□ 0.72
SF3B2-215ENST00000534307 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
SF3B2-215ENST00000534307 ANO8Q9HCE9 1232 aaPredicted RBP19.57■□□□□ 0.72
SF3B2-215ENST00000534307 NSD3Q9BZ95 1437 aa19.57■□□□□ 0.72
SF3B2-215ENST00000534307 RTL1A6NKG5 1358 aa19.57■□□□□ 0.72
SF3B2-215ENST00000534307 HSPA5P11021 654 aaKnown RBP19.56■□□□□ 0.72
SF3B2-215ENST00000534307 HOXC9P31274 260 aa19.56■□□□□ 0.72
SF3B2-215ENST00000534307 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
SF3B2-215ENST00000534307 EXOC5O00471 708 aa19.54■□□□□ 0.72
SF3B2-215ENST00000534307 IL2RBP14784 551 aa19.54■□□□□ 0.72
SF3B2-215ENST00000534307 ZNF784Q8NCA9 323 aaPredicted RBP19.54■□□□□ 0.72
SF3B2-215ENST00000534307 RGPD2P0DJD1 1756 aa19.53■□□□□ 0.72
SF3B2-215ENST00000534307 RRS1Q15050 365 aaKnown RBP19.53■□□□□ 0.72
SF3B2-215ENST00000534307 PTF1AQ7RTS3 328 aa19.53■□□□□ 0.72
SF3B2-215ENST00000534307 PDGFDQ9GZP0 370 aaPredicted RBP19.53■□□□□ 0.72
SF3B2-215ENST00000534307 AMPHP49418 695 aa19.52■□□□□ 0.72
SF3B2-215ENST00000534307 BCL11BQ9C0K0 894 aaPredicted RBP19.52■□□□□ 0.72
SF3B2-215ENST00000534307 ANKRD26Q9UPS8 1709 aa19.51■□□□□ 0.71
SF3B2-215ENST00000534307 NHSQ6T4R5 1651 aa19.5■□□□□ 0.71
SF3B2-215ENST00000534307 KIF24Q5T7B8 1368 aa19.5■□□□□ 0.71
SF3B2-215ENST00000534307 LTV1Q96GA3 475 aaPredicted RBP19.5■□□□□ 0.71
SF3B2-215ENST00000534307 PLSCR1O15162 318 aa19.49■□□□□ 0.71
SF3B2-215ENST00000534307 PTGER2P43116 358 aa19.49■□□□□ 0.71
SF3B2-215ENST00000534307 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
SF3B2-215ENST00000534307 INSRP06213 1382 aa19.47■□□□□ 0.71
SF3B2-215ENST00000534307 FLT4P35916 1363 aa19.47■□□□□ 0.71
SF3B2-215ENST00000534307 ZBTB7AO95365 584 aa19.47■□□□□ 0.71
SF3B2-215ENST00000534307 CGNL1Q0VF96 1302 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms