RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
CLNS1A-212ENST00000533957 GMPRP36959 345 aa9.3□□□□□ -0.92
CLNS1A-212ENST00000533957 FBXO31Q5XUX0 539 aaPredicted RBP9.3□□□□□ -0.92
CLNS1A-212ENST00000533957 VASH1Q7L8A9 365 aaPredicted RBP9.3□□□□□ -0.92
CLNS1A-212ENST00000533957 KDM4CQ9H3R0 1056 aa9.3□□□□□ -0.92
CLNS1A-212ENST00000533957 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
CLNS1A-212ENST00000533957 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
CLNS1A-212ENST00000533957 LRRN4Q8WUT4 740 aa9.29□□□□□ -0.92
CLNS1A-212ENST00000533957 FAM117AQ9C073 453 aa9.29□□□□□ -0.92
CLNS1A-212ENST00000533957 FSHRP23945 695 aa9.28□□□□□ -0.92
CLNS1A-212ENST00000533957 SH3D19Q5HYK7 790 aa9.28□□□□□ -0.92
CLNS1A-212ENST00000533957 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
CLNS1A-212ENST00000533957 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLNS1A-212ENST00000533957 CARD14Q9BXL6 1004 aa9.28□□□□□ -0.92
CLNS1A-212ENST00000533957 ERBB4Q15303 1308 aa9.28□□□□□ -0.92
CLNS1A-212ENST00000533957 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
CLNS1A-212ENST00000533957 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
CLNS1A-212ENST00000533957 DDRGK1Q96HY6 314 aa9.27□□□□□ -0.93
CLNS1A-212ENST00000533957 MAN1A2O60476 641 aa9.26□□□□□ -0.93
CLNS1A-212ENST00000533957 UPP2O95045 317 aa9.26□□□□□ -0.93
CLNS1A-212ENST00000533957 BMP2P12643 396 aa9.26□□□□□ -0.93
CLNS1A-212ENST00000533957 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
CLNS1A-212ENST00000533957 FKBPLQ9UIM3 349 aa9.26□□□□□ -0.93
CLNS1A-212ENST00000533957 ATP1B4Q9UN42 357 aaPredicted RBP9.26□□□□□ -0.93
CLNS1A-212ENST00000533957 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
CLNS1A-212ENST00000533957 BAZ1BQ9UIG0 1483 aaKnown RBP9.26□□□□□ -0.93
CLNS1A-212ENST00000533957 NR6A1Q15406 480 aa9.25□□□□□ -0.93
CLNS1A-212ENST00000533957 CCDC116Q8IYX3 515 aa9.25□□□□□ -0.93
CLNS1A-212ENST00000533957 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
CLNS1A-212ENST00000533957 ARHGAP9Q9BRR9 750 aa9.25□□□□□ -0.93
CLNS1A-212ENST00000533957 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
CLNS1A-212ENST00000533957 BCANQ96GW7 911 aa9.23□□□□□ -0.93
CLNS1A-212ENST00000533957 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
CLNS1A-212ENST00000533957 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
CLNS1A-212ENST00000533957 SOS2Q07890 1332 aaPredicted RBP9.22□□□□□ -0.93
CLNS1A-212ENST00000533957 AP1G2O75843 785 aa9.21□□□□□ -0.94
CLNS1A-212ENST00000533957 PPP1R26Q5T8A7 1209 aaPredicted RBP9.21□□□□□ -0.94
CLNS1A-212ENST00000533957 ZBTB33Q86T24 672 aa9.21□□□□□ -0.94
CLNS1A-212ENST00000533957 ZSCAN1Q8NBB4 408 aa9.21□□□□□ -0.94
CLNS1A-212ENST00000533957 KCTD15Q96SI1 283 aaPredicted RBP9.21□□□□□ -0.94
CLNS1A-212ENST00000533957 ZC3H4Q9UPT8 1303 aaKnown RBP9.21□□□□□ -0.94
CLNS1A-212ENST00000533957 TOP2AP11388 1531 aaKnown RBP9.21□□□□□ -0.94
CLNS1A-212ENST00000533957 PRDM2Q13029 1718 aa9.2□□□□□ -0.94
CLNS1A-212ENST00000533957 VSIG8P0DPA2 414 aa9.2□□□□□ -0.94
CLNS1A-212ENST00000533957 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
CLNS1A-212ENST00000533957 CDV3Q9UKY7 258 aaKnown RBP9.2□□□□□ -0.94
CLNS1A-212ENST00000533957 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
CLNS1A-212ENST00000533957 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
CLNS1A-212ENST00000533957 PTK2Q05397 1052 aa9.19□□□□□ -0.94
CLNS1A-212ENST00000533957 EPS8L1Q8TE68 723 aa9.19□□□□□ -0.94
CLNS1A-212ENST00000533957 SLC10A4Q96EP9 437 aa9.19□□□□□ -0.94
CLNS1A-212ENST00000533957 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
CLNS1A-212ENST00000533957 DNMT3LQ9UJW3 386 aa9.19□□□□□ -0.94
CLNS1A-212ENST00000533957 CBLBQ13191 982 aa9.18□□□□□ -0.94
CLNS1A-212ENST00000533957 Q6ZVU0 165 aa9.18□□□□□ -0.94
CLNS1A-212ENST00000533957 GPSM3Q9Y4H4 160 aa9.18□□□□□ -0.94
CLNS1A-212ENST00000533957 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
CLNS1A-212ENST00000533957 ADAM32Q8TC27 787 aa9.16□□□□□ -0.94
CLNS1A-212ENST00000533957 SPINT1O43278 529 aa9.15□□□□□ -0.94
CLNS1A-212ENST00000533957 ZEB1P37275 1124 aaPredicted RBP9.15□□□□□ -0.94
CLNS1A-212ENST00000533957 DHX9Q08211 1270 aaKnown RBP9.15□□□□□ -0.94
CLNS1A-212ENST00000533957 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.15□□□□□ -0.94
CLNS1A-212ENST00000533957 HMX1Q9NP08 348 aaPredicted RBP9.15□□□□□ -0.94
CLNS1A-212ENST00000533957 FIGNL2A6NMB9 653 aa9.14□□□□□ -0.95
CLNS1A-212ENST00000533957 USP17L8P0C7I0 530 aa9.14□□□□□ -0.95
CLNS1A-212ENST00000533957 RFC5P40937 340 aa9.14□□□□□ -0.95
CLNS1A-212ENST00000533957 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
CLNS1A-212ENST00000533957 LAMC3Q9Y6N6 1575 aa9.14□□□□□ -0.95
CLNS1A-212ENST00000533957 KIF21AQ7Z4S6 1674 aa9.13□□□□□ -0.95
CLNS1A-212ENST00000533957 TRIM26Q12899 539 aaPredicted RBP9.13□□□□□ -0.95
CLNS1A-212ENST00000533957 PNMA1Q8ND90 353 aa9.13□□□□□ -0.95
CLNS1A-212ENST00000533957 PTSQ03393 145 aa9.12□□□□□ -0.95
CLNS1A-212ENST00000533957 GOPCQ9HD26 462 aa9.12□□□□□ -0.95
CLNS1A-212ENST00000533957 AGBL1Q96MI9 1066 aa9.11□□□□□ -0.95
CLNS1A-212ENST00000533957 NBPF20Q3BBV1 942 aa9.1□□□□□ -0.95
CLNS1A-212ENST00000533957 DZIP3Q86Y13 1208 aaKnown RBP9.1□□□□□ -0.95
CLNS1A-212ENST00000533957 TMPRSS4Q9NRS4 437 aa9.1□□□□□ -0.95
CLNS1A-212ENST00000533957 RELBQ01201 579 aa9.09□□□□□ -0.95
CLNS1A-212ENST00000533957 TMEM259Q4ZIN3 620 aa9.09□□□□□ -0.95
CLNS1A-212ENST00000533957 GPR161Q8N6U8 529 aaKnown RBP9.09□□□□□ -0.95
CLNS1A-212ENST00000533957 THOC2Q8NI27 1593 aaKnown RBP9.08□□□□□ -0.96
CLNS1A-212ENST00000533957 CTSOP43234 321 aaPredicted RBP9.08□□□□□ -0.96
CLNS1A-212ENST00000533957 PCMTD1Q96MG8 357 aaPredicted RBP9.08□□□□□ -0.96
CLNS1A-212ENST00000533957 INSM2Q96T92 566 aaPredicted RBP9.08□□□□□ -0.96
CLNS1A-212ENST00000533957 TRIM34Q9BYJ4 488 aa9.08□□□□□ -0.96
CLNS1A-212ENST00000533957 NESP48681 1621 aa9.08□□□□□ -0.96
CLNS1A-212ENST00000533957 ERVH48-1M5A8F1 160 aa9.07□□□□□ -0.96
CLNS1A-212ENST00000533957 ADD1P35611 737 aaKnown RBP9.07□□□□□ -0.96
CLNS1A-212ENST00000533957 RAB15P59190 212 aa9.07□□□□□ -0.96
CLNS1A-212ENST00000533957 CCDC155Q8N6L0 562 aa9.07□□□□□ -0.96
CLNS1A-212ENST00000533957 ZNF784Q8NCA9 323 aaPredicted RBP9.07□□□□□ -0.96
CLNS1A-212ENST00000533957 IL27Q8NEV9 243 aa9.07□□□□□ -0.96
CLNS1A-212ENST00000533957 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
CLNS1A-212ENST00000533957 ESPNB1AK53 854 aa9.06□□□□□ -0.96
CLNS1A-212ENST00000533957 LILRA1O75019 489 aa9.06□□□□□ -0.96
CLNS1A-212ENST00000533957 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
CLNS1A-212ENST00000533957 SLC35F4A4IF30 521 aa9.05□□□□□ -0.96
CLNS1A-212ENST00000533957 SLC24A1O60721 1099 aa9.04□□□□□ -0.96
CLNS1A-212ENST00000533957 KRT76Q01546 638 aa9.04□□□□□ -0.96
CLNS1A-212ENST00000533957 NEUROD2Q15784 382 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms