RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 RGPD3A6NKT7 1758 aaPredicted RBP26.11■■□□□ 1.77
HIF3A-216ENST00000533789 RGPD4Q7Z3J3 1758 aa26.11■■□□□ 1.77
HIF3A-216ENST00000533789 PDE3BQ13370 1112 aa26.09■■□□□ 1.77
HIF3A-216ENST00000533789 USP31Q70CQ4 1352 aa26.08■■□□□ 1.77
HIF3A-216ENST00000533789 EDC4Q6P2E9 1401 aaKnown RBP26.08■■□□□ 1.77
HIF3A-216ENST00000533789 EN1Q05925 392 aaPredicted RBP26.08■■□□□ 1.77
HIF3A-216ENST00000533789 ARHGEF25Q86VW2 580 aa26.08■■□□□ 1.77
HIF3A-216ENST00000533789 WDR17Q8IZU2 1322 aa26.07■■□□□ 1.76
HIF3A-216ENST00000533789 PUS7Q96PZ0 661 aaKnown RBP26.06■■□□□ 1.76
HIF3A-216ENST00000533789 AXIN2Q9Y2T1 843 aa26.06■■□□□ 1.76
HIF3A-216ENST00000533789 A0A1W2PP64 1363 aa26.06■■□□□ 1.76
HIF3A-216ENST00000533789 SOX12O15370 315 aa26.05■■□□□ 1.76
HIF3A-216ENST00000533789 TRIM37O94972 964 aa26.05■■□□□ 1.76
HIF3A-216ENST00000533789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.05■■□□□ 1.76
HIF3A-216ENST00000533789 TMC1Q8TDI8 760 aa26.05■■□□□ 1.76
HIF3A-216ENST00000533789 FAM208AQ9UK61 1670 aaKnown RBP26.05■■□□□ 1.76
HIF3A-216ENST00000533789 TOM1L2Q6ZVM7 507 aa26.04■■□□□ 1.76
HIF3A-216ENST00000533789 HDGFL2Q7Z4V5 671 aaPredicted RBP26.04■■□□□ 1.76
HIF3A-216ENST00000533789 NINLQ9Y2I6 1382 aa26.04■■□□□ 1.76
HIF3A-216ENST00000533789 OVOS2A0A0G2JMS6 1433 aa26.04■■□□□ 1.76
HIF3A-216ENST00000533789 OVOS2A0A0J9YW53 1432 aa26.04■■□□□ 1.76
HIF3A-216ENST00000533789 OVOS2Q6IE36 1432 aa26.04■■□□□ 1.76
HIF3A-216ENST00000533789 TESK2Q96S53 571 aa26.03■■□□□ 1.76
HIF3A-216ENST00000533789 SLC12A5Q9H2X9 1139 aa26.03■■□□□ 1.76
HIF3A-216ENST00000533789 PARD3Q8TEW0 1356 aa26.03■■□□□ 1.76
HIF3A-216ENST00000533789 ST20-MTHFSA0A0A6YYL1 179 aa26.01■■□□□ 1.75
HIF3A-216ENST00000533789 NME9Q86XW9 330 aa26.01■■□□□ 1.75
HIF3A-216ENST00000533789 TERF2IPQ9NYB0 399 aa26.01■■□□□ 1.75
HIF3A-216ENST00000533789 KIF20BQ96Q89 1820 aa26■■□□□ 1.75
HIF3A-216ENST00000533789 C11orf95C9JLR9 678 aaPredicted RBP25.99■■□□□ 1.75
HIF3A-216ENST00000533789 EZH2Q15910 746 aaKnown RBP25.99■■□□□ 1.75
HIF3A-216ENST00000533789 CAMKK2Q96RR4 588 aa25.98■■□□□ 1.75
HIF3A-216ENST00000533789 MYOM1P52179 1685 aa25.97■■□□□ 1.75
HIF3A-216ENST00000533789 PSDA5PKW4 1024 aaPredicted RBP25.97■■□□□ 1.75
HIF3A-216ENST00000533789 SLC24A1O60721 1099 aa25.97■■□□□ 1.75
HIF3A-216ENST00000533789 APBA3O96018 575 aa25.97■■□□□ 1.75
HIF3A-216ENST00000533789 USP47Q96K76 1375 aa25.96■■□□□ 1.75
HIF3A-216ENST00000533789 CSB-PGBD3P0DP91 1061 aa25.96■■□□□ 1.75
HIF3A-216ENST00000533789 DDB1Q16531 1140 aa25.96■■□□□ 1.75
HIF3A-216ENST00000533789 CDCA7Q9BWT1 371 aaPredicted RBP25.96■■□□□ 1.75
HIF3A-216ENST00000533789 CARD10Q9BWT7 1032 aa25.96■■□□□ 1.75
HIF3A-216ENST00000533789 CCDC7Q96M83 1385 aa25.95■■□□□ 1.75
HIF3A-216ENST00000533789 KAT6BQ8WYB5 2073 aa25.95■■□□□ 1.74
HIF3A-216ENST00000533789 RGPD2P0DJD1 1756 aa25.95■■□□□ 1.74
HIF3A-216ENST00000533789 NHSQ6T4R5 1651 aa25.93■■□□□ 1.74
HIF3A-216ENST00000533789 ERBB3P21860 1342 aa25.92■■□□□ 1.74
HIF3A-216ENST00000533789 BCL9O00512 1426 aa25.92■■□□□ 1.74
HIF3A-216ENST00000533789 TNS2Q63HR2 1409 aa25.92■■□□□ 1.74
HIF3A-216ENST00000533789 ANKRD36BQ8N2N9 1353 aa25.91■■□□□ 1.74
HIF3A-216ENST00000533789 R3HDM1Q15032 1099 aaKnown RBP25.89■■□□□ 1.74
HIF3A-216ENST00000533789 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
HIF3A-216ENST00000533789 TMF1P82094 1093 aa25.87■■□□□ 1.73
HIF3A-216ENST00000533789 MARCH10Q8NA82 808 aaPredicted RBP25.86■■□□□ 1.73
HIF3A-216ENST00000533789 TIMELESSQ9UNS1 1208 aa25.85■■□□□ 1.73
HIF3A-216ENST00000533789 BTAF1O14981 1849 aa25.85■■□□□ 1.73
HIF3A-216ENST00000533789 SHANK3Q9BYB0 1731 aa25.84■■□□□ 1.73
HIF3A-216ENST00000533789 ANKRD24Q8TF21 1146 aa25.83■■□□□ 1.73
HIF3A-216ENST00000533789 EXOC5O00471 708 aa25.82■■□□□ 1.72
HIF3A-216ENST00000533789 COG3Q96JB2 828 aa25.82■■□□□ 1.72
HIF3A-216ENST00000533789 BCL11BQ9C0K0 894 aaPredicted RBP25.82■■□□□ 1.72
HIF3A-216ENST00000533789 NLRP2Q9NX02 1062 aa25.82■■□□□ 1.72
HIF3A-216ENST00000533789 CASZ1Q86V15 1759 aa25.81■■□□□ 1.72
HIF3A-216ENST00000533789 PLSCR1O15162 318 aa25.8■■□□□ 1.72
HIF3A-216ENST00000533789 CDCA8Q53HL2 280 aa25.79■■□□□ 1.72
HIF3A-216ENST00000533789 NBPF14Q5TI25 921 aa25.79■■□□□ 1.72
HIF3A-216ENST00000533789 IP6K1Q92551 441 aa25.79■■□□□ 1.72
HIF3A-216ENST00000533789 IL2RBP14784 551 aa25.78■■□□□ 1.72
HIF3A-216ENST00000533789 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
HIF3A-216ENST00000533789 ANKRD26Q9UPS8 1709 aa25.77■■□□□ 1.72
HIF3A-216ENST00000533789 PTF1AQ7RTS3 328 aa25.77■■□□□ 1.72
HIF3A-216ENST00000533789 RTL1A6NKG5 1358 aa25.77■■□□□ 1.72
HIF3A-216ENST00000533789 DOT1LQ8TEK3 1739 aa25.77■■□□□ 1.72
HIF3A-216ENST00000533789 MAP3K19Q56UN5 1328 aa25.76■■□□□ 1.71
HIF3A-216ENST00000533789 MAP2P11137 1827 aaKnown RBP25.76■■□□□ 1.71
HIF3A-216ENST00000533789 HOXC9P31274 260 aa25.73■■□□□ 1.71
HIF3A-216ENST00000533789 FYB1O15117 783 aa25.72■■□□□ 1.71
HIF3A-216ENST00000533789 PAPPAQ13219 1627 aa25.7■■□□□ 1.71
HIF3A-216ENST00000533789 AMPHP49418 695 aa25.7■■□□□ 1.7
HIF3A-216ENST00000533789 LTV1Q96GA3 475 aaPredicted RBP25.7■■□□□ 1.7
HIF3A-216ENST00000533789 GGNBP2Q9H3C7 697 aa25.7■■□□□ 1.7
HIF3A-216ENST00000533789 FBLN1P23142 703 aa25.69■■□□□ 1.7
HIF3A-216ENST00000533789 LY75O60449 1722 aa25.67■■□□□ 1.7
HIF3A-216ENST00000533789 NSD3Q9BZ95 1437 aa25.67■■□□□ 1.7
HIF3A-216ENST00000533789 ANO8Q9HCE9 1232 aaPredicted RBP25.67■■□□□ 1.7
HIF3A-216ENST00000533789 QSER1Q2KHR3 1735 aa25.66■■□□□ 1.7
HIF3A-216ENST00000533789 KCNQ2O43526 872 aa25.66■■□□□ 1.7
HIF3A-216ENST00000533789 RRS1Q15050 365 aaKnown RBP25.66■■□□□ 1.7
HIF3A-216ENST00000533789 PROM2Q8N271 834 aa25.66■■□□□ 1.7
HIF3A-216ENST00000533789 MEGF6O75095 1541 aa25.66■■□□□ 1.7
HIF3A-216ENST00000533789 SMG6Q86US8 1419 aaKnown RBP25.65■■□□□ 1.7
HIF3A-216ENST00000533789 ACSBG1Q96GR2 724 aa25.65■■□□□ 1.7
HIF3A-216ENST00000533789 TXNRD1Q16881 649 aa25.64■■□□□ 1.7
HIF3A-216ENST00000533789 KIF24Q5T7B8 1368 aa25.64■■□□□ 1.69
HIF3A-216ENST00000533789 TUBGCP6Q96RT7 1819 aa25.63■■□□□ 1.69
HIF3A-216ENST00000533789 PKD1L3Q7Z443 1732 aa25.63■■□□□ 1.69
HIF3A-216ENST00000533789 FLT4P35916 1363 aa25.62■■□□□ 1.69
HIF3A-216ENST00000533789 CARD14Q9BXL6 1004 aa25.61■■□□□ 1.69
HIF3A-216ENST00000533789 INSRP06213 1382 aa25.6■■□□□ 1.69
HIF3A-216ENST00000533789 ITGB4P16144 1822 aa25.6■■□□□ 1.69
HIF3A-216ENST00000533789 SPON1Q9HCB6 807 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms