RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 CRB1P82279 1406 aa21.9■■□□□ 1.1
TSKU-204ENST00000533752 LARP1Q6PKG0 1096 aaKnown RBP21.9■■□□□ 1.1
TSKU-204ENST00000533752 THSD7AQ9UPZ6 1657 aa21.89■■□□□ 1.1
TSKU-204ENST00000533752 THRAP3Q9Y2W1 955 aaKnown RBP21.89■■□□□ 1.09
TSKU-204ENST00000533752 KIF20BQ96Q89 1820 aa21.89■■□□□ 1.09
TSKU-204ENST00000533752 BARGINQ6ZT62 677 aa21.88■■□□□ 1.09
TSKU-204ENST00000533752 TCP11L2Q8N4U5 519 aa21.88■■□□□ 1.09
TSKU-204ENST00000533752 UPF1Q92900 1129 aaKnown RBP eCLIP21.88■■□□□ 1.09
TSKU-204ENST00000533752 WDR17Q8IZU2 1322 aa21.87■■□□□ 1.09
TSKU-204ENST00000533752 FYB1O15117 783 aa21.87■■□□□ 1.09
TSKU-204ENST00000533752 LTN1O94822 1766 aa21.87■■□□□ 1.09
TSKU-204ENST00000533752 CGNL1Q0VF96 1302 aa21.86■■□□□ 1.09
TSKU-204ENST00000533752 CARD14Q9BXL6 1004 aa21.86■■□□□ 1.09
TSKU-204ENST00000533752 KRT27Q7Z3Y8 459 aa21.85■■□□□ 1.09
TSKU-204ENST00000533752 GGNBP2Q9H3C7 697 aa21.85■■□□□ 1.09
TSKU-204ENST00000533752 USP35Q9P2H5 1018 aa21.85■■□□□ 1.09
TSKU-204ENST00000533752 AXIN2Q9Y2T1 843 aa21.85■■□□□ 1.09
TSKU-204ENST00000533752 BLMP54132 1417 aaPredicted RBP21.85■■□□□ 1.09
TSKU-204ENST00000533752 CSB-PGBD3P0DP91 1061 aa21.84■■□□□ 1.09
TSKU-204ENST00000533752 TOM1L2Q6ZVM7 507 aa21.84■■□□□ 1.09
TSKU-204ENST00000533752 BRWD3Q6RI45 1802 aa21.84■■□□□ 1.09
TSKU-204ENST00000533752 RTL1A6NKG5 1358 aa21.82■■□□□ 1.08
TSKU-204ENST00000533752 ERBB3P21860 1342 aa21.81■■□□□ 1.08
TSKU-204ENST00000533752 KIF7Q2M1P5 1343 aa21.81■■□□□ 1.08
TSKU-204ENST00000533752 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
TSKU-204ENST00000533752 RGPD5Q99666 1765 aa21.8■■□□□ 1.08
TSKU-204ENST00000533752 CCDC7Q96M83 1385 aa21.8■■□□□ 1.08
TSKU-204ENST00000533752 IP6K1Q92551 441 aa21.8■■□□□ 1.08
TSKU-204ENST00000533752 CARD10Q9BWT7 1032 aa21.8■■□□□ 1.08
TSKU-204ENST00000533752 MAP3K19Q56UN5 1328 aa21.8■■□□□ 1.08
TSKU-204ENST00000533752 CCDC125Q86Z20 511 aa21.79■■□□□ 1.08
TSKU-204ENST00000533752 CDCA7Q9BWT1 371 aaPredicted RBP21.79■■□□□ 1.08
TSKU-204ENST00000533752 PANK3Q9H999 370 aa21.79■■□□□ 1.08
TSKU-204ENST00000533752 EP400Q96L91 3159 aa21.79■■□□□ 1.08
TSKU-204ENST00000533752 NSD2O96028 1365 aa21.78■■□□□ 1.08
TSKU-204ENST00000533752 KIF24Q5T7B8 1368 aa21.78■■□□□ 1.08
TSKU-204ENST00000533752 AMPHP49418 695 aa21.78■■□□□ 1.08
TSKU-204ENST00000533752 PARP4Q9UKK3 1724 aaKnown RBP21.77■■□□□ 1.08
TSKU-204ENST00000533752 ANKRD24Q8TF21 1146 aa21.77■■□□□ 1.08
TSKU-204ENST00000533752 FAM208AQ9UK61 1670 aaKnown RBP21.76■■□□□ 1.07
TSKU-204ENST00000533752 HOXC9P31274 260 aa21.75■■□□□ 1.07
TSKU-204ENST00000533752 PDE3BQ13370 1112 aa21.75■■□□□ 1.07
TSKU-204ENST00000533752 WNK3Q9BYP7 1800 aa21.75■■□□□ 1.07
TSKU-204ENST00000533752 ANKRD26Q9UPS8 1709 aa21.75■■□□□ 1.07
TSKU-204ENST00000533752 SMG6Q86US8 1419 aaKnown RBP21.73■■□□□ 1.07
TSKU-204ENST00000533752 RRS1Q15050 365 aaKnown RBP21.73■■□□□ 1.07
TSKU-204ENST00000533752 NLRP2Q9NX02 1062 aa21.73■■□□□ 1.07
TSKU-204ENST00000533752 KNSTRNQ9Y448 316 aa21.73■■□□□ 1.07
TSKU-204ENST00000533752 FLT4P35916 1363 aa21.73■■□□□ 1.07
TSKU-204ENST00000533752 DISP2A7MBM2 1401 aa21.72■■□□□ 1.07
TSKU-204ENST00000533752 LRRC37A3O60309 1634 aa21.72■■□□□ 1.07
TSKU-204ENST00000533752 FBLN1P23142 703 aa21.71■■□□□ 1.07
TSKU-204ENST00000533752 SF3B2Q13435 895 aaKnown RBP21.71■■□□□ 1.07
TSKU-204ENST00000533752 DDB1Q16531 1140 aa21.71■■□□□ 1.07
TSKU-204ENST00000533752 FAM196AQ6ZSG2 479 aa21.7■■□□□ 1.06
TSKU-204ENST00000533752 INSRP06213 1382 aa21.7■■□□□ 1.06
TSKU-204ENST00000533752 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
TSKU-204ENST00000533752 LTV1Q96GA3 475 aaPredicted RBP21.68■■□□□ 1.06
TSKU-204ENST00000533752 OVOS2A0A0G2JMS6 1433 aa21.67■■□□□ 1.06
TSKU-204ENST00000533752 TNS2Q63HR2 1409 aa21.67■■□□□ 1.06
TSKU-204ENST00000533752 RGPD1P0DJD0 1748 aa21.66■■□□□ 1.06
TSKU-204ENST00000533752 PEAK1Q9H792 1746 aa21.66■■□□□ 1.06
TSKU-204ENST00000533752 IL2RBP14784 551 aa21.66■■□□□ 1.06
TSKU-204ENST00000533752 FAM182BQ5T319 152 aa21.65■■□□□ 1.06
TSKU-204ENST00000533752 EMILIN1Q9Y6C2 1016 aa21.65■■□□□ 1.06
TSKU-204ENST00000533752 MORC1Q86VD1 984 aa21.64■■□□□ 1.05
TSKU-204ENST00000533752 EXOC5O00471 708 aa21.63■■□□□ 1.05
TSKU-204ENST00000533752 HSP90AB2PQ58FF8 381 aa21.63■■□□□ 1.05
TSKU-204ENST00000533752 AMER1Q5JTC6 1135 aaPredicted RBP21.63■■□□□ 1.05
TSKU-204ENST00000533752 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
TSKU-204ENST00000533752 BAG6P46379 1132 aa21.62■■□□□ 1.05
TSKU-204ENST00000533752 POLKQ9UBT6 870 aa21.62■■□□□ 1.05
TSKU-204ENST00000533752 BCL9O00512 1426 aa21.62■■□□□ 1.05
TSKU-204ENST00000533752 TNNT2P45379 298 aaPredicted RBP21.61■■□□□ 1.05
TSKU-204ENST00000533752 MAP2P11137 1827 aaKnown RBP21.6■■□□□ 1.05
TSKU-204ENST00000533752 NPC1L1Q9UHC9 1359 aa21.6■■□□□ 1.05
TSKU-204ENST00000533752 PER1O15534 1290 aaPredicted RBP21.59■■□□□ 1.05
TSKU-204ENST00000533752 TNS1Q9HBL0 1735 aaKnown RBP21.59■■□□□ 1.05
TSKU-204ENST00000533752 TRIM37O94972 964 aa21.58■■□□□ 1.05
TSKU-204ENST00000533752 ZEB1P37275 1124 aaPredicted RBP21.58■■□□□ 1.05
TSKU-204ENST00000533752 NBPF6Q5VWK0 638 aa21.57■■□□□ 1.04
TSKU-204ENST00000533752 MARCH10Q8NA82 808 aaPredicted RBP21.57■■□□□ 1.04
TSKU-204ENST00000533752 NBPF4Q96M43 638 aa21.57■■□□□ 1.04
TSKU-204ENST00000533752 RGPD2P0DJD1 1756 aa21.56■■□□□ 1.04
TSKU-204ENST00000533752 DEFB132Q7Z7B7 95 aa21.55■■□□□ 1.04
TSKU-204ENST00000533752 RAPGEF4Q8WZA2 1011 aa21.55■■□□□ 1.04
TSKU-204ENST00000533752 MEGF6O75095 1541 aa21.55■■□□□ 1.04
TSKU-204ENST00000533752 NCAPD2Q15021 1401 aa21.55■■□□□ 1.04
TSKU-204ENST00000533752 PARD3Q8TEW0 1356 aa21.54■■□□□ 1.04
TSKU-204ENST00000533752 USHBP1Q8N6Y0 703 aa21.52■■□□□ 1.04
TSKU-204ENST00000533752 APBA3O96018 575 aa21.51■■□□□ 1.03
TSKU-204ENST00000533752 TATP17735 454 aaPredicted RBP21.51■■□□□ 1.03
TSKU-204ENST00000533752 CC2D1BQ5T0F9 858 aaKnown RBP21.51■■□□□ 1.03
TSKU-204ENST00000533752 BCL11BQ9C0K0 894 aaPredicted RBP21.51■■□□□ 1.03
TSKU-204ENST00000533752 EIF4A2Q14240 407 aaKnown RBP21.5■■□□□ 1.03
TSKU-204ENST00000533752 ZCRB1Q8TBF4 217 aaKnown RBP21.5■■□□□ 1.03
TSKU-204ENST00000533752 SBF2Q86WG5 1849 aa21.5■■□□□ 1.03
TSKU-204ENST00000533752 PLEKHG2Q9H7P9 1386 aa21.49■■□□□ 1.03
TSKU-204ENST00000533752 EN1Q05925 392 aaPredicted RBP21.49■■□□□ 1.03
TSKU-204ENST00000533752 EYA1Q99502 592 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms