RNA–Protein interactions for RNA: ENST00000533660.1

MS4A6A-219, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-219ENST00000533660 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 DHX9Q08211 1270 aaKnown RBP7.74□□□□□ -1.17
MS4A6A-219ENST00000533660 SLC10A4Q96EP9 437 aa7.74□□□□□ -1.17
MS4A6A-219ENST00000533660 TSEN34Q9BSV6 310 aaKnown RBP7.74□□□□□ -1.17
MS4A6A-219ENST00000533660 AP1G2O75843 785 aa7.73□□□□□ -1.17
MS4A6A-219ENST00000533660 NR6A1Q15406 480 aa7.73□□□□□ -1.17
MS4A6A-219ENST00000533660 TMEM259Q4ZIN3 620 aa7.73□□□□□ -1.17
MS4A6A-219ENST00000533660 LINC00528Q8N1L1 170 aa7.73□□□□□ -1.17
MS4A6A-219ENST00000533660 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
MS4A6A-219ENST00000533660 USP17L8P0C7I0 530 aa7.72□□□□□ -1.17
MS4A6A-219ENST00000533660 VSIG8P0DPA2 414 aa7.72□□□□□ -1.17
MS4A6A-219ENST00000533660 RFC5P40937 340 aa7.72□□□□□ -1.17
MS4A6A-219ENST00000533660 Q6ZVU0 165 aa7.72□□□□□ -1.17
MS4A6A-219ENST00000533660 ZBTB33Q86T24 672 aa7.72□□□□□ -1.17
MS4A6A-219ENST00000533660 CARD14Q9BXL6 1004 aa7.72□□□□□ -1.17
MS4A6A-219ENST00000533660 NBPF20Q3BBV1 942 aa7.71□□□□□ -1.18
MS4A6A-219ENST00000533660 TRIM52Q96A61 297 aa7.71□□□□□ -1.18
MS4A6A-219ENST00000533660 PCMTD1Q96MG8 357 aaPredicted RBP7.71□□□□□ -1.18
MS4A6A-219ENST00000533660 KCTD15Q96SI1 283 aaPredicted RBP7.71□□□□□ -1.18
MS4A6A-219ENST00000533660 SOCS7O14512 581 aa7.7□□□□□ -1.18
MS4A6A-219ENST00000533660 PPP1R26Q5T8A7 1209 aaPredicted RBP7.7□□□□□ -1.18
MS4A6A-219ENST00000533660 OCSTAMPQ9BR26 566 aa7.7□□□□□ -1.18
MS4A6A-219ENST00000533660 ATP1B4Q9UN42 357 aaPredicted RBP7.7□□□□□ -1.18
MS4A6A-219ENST00000533660 SOS2Q07890 1332 aaPredicted RBP7.7□□□□□ -1.18
MS4A6A-219ENST00000533660 MAN1A2O60476 641 aa7.69□□□□□ -1.18
MS4A6A-219ENST00000533660 BMP2P12643 396 aa7.69□□□□□ -1.18
MS4A6A-219ENST00000533660 CCDC125Q86Z20 511 aa7.68□□□□□ -1.18
MS4A6A-219ENST00000533660 ADAM32Q8TC27 787 aa7.68□□□□□ -1.18
MS4A6A-219ENST00000533660 HMX1Q9NP08 348 aaPredicted RBP7.68□□□□□ -1.18
MS4A6A-219ENST00000533660 FAM181BA6NEQ2 426 aa7.67□□□□□ -1.18
MS4A6A-219ENST00000533660 C6orf118Q5T5N4 469 aa7.67□□□□□ -1.18
MS4A6A-219ENST00000533660 SEPT12Q8IYM1 358 aa7.67□□□□□ -1.18
MS4A6A-219ENST00000533660 SPINT1O43278 529 aa7.66□□□□□ -1.18
MS4A6A-219ENST00000533660 GMPRP36959 345 aa7.66□□□□□ -1.18
MS4A6A-219ENST00000533660 NEUROD2Q15784 382 aa7.66□□□□□ -1.18
MS4A6A-219ENST00000533660 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.18
MS4A6A-219ENST00000533660 INTS6LQ5JSJ4 861 aaKnown RBP7.66□□□□□ -1.18
MS4A6A-219ENST00000533660 EPS8L1Q8TE68 723 aa7.66□□□□□ -1.18
MS4A6A-219ENST00000533660 ESPNB1AK53 854 aa7.65□□□□□ -1.18
MS4A6A-219ENST00000533660 TRIM34Q9BYJ4 488 aa7.65□□□□□ -1.18
MS4A6A-219ENST00000533660 ERBB4Q15303 1308 aa7.64□□□□□ -1.19
MS4A6A-219ENST00000533660 TTLL8A6PVC2 850 aa7.64□□□□□ -1.19
MS4A6A-219ENST00000533660 BANK1Q8NDB2 785 aa7.64□□□□□ -1.19
MS4A6A-219ENST00000533660 ZNF592Q92610 1267 aa7.64□□□□□ -1.19
MS4A6A-219ENST00000533660 DNMT3LQ9UJW3 386 aa7.64□□□□□ -1.19
MS4A6A-219ENST00000533660 MCCD1P59942 119 aaPredicted RBP7.63□□□□□ -1.19
MS4A6A-219ENST00000533660 DZIP3Q86Y13 1208 aaKnown RBP7.63□□□□□ -1.19
MS4A6A-219ENST00000533660 SOBPA7XYQ1 873 aa7.62□□□□□ -1.19
MS4A6A-219ENST00000533660 ZBBXA8MT70 800 aa7.62□□□□□ -1.19
MS4A6A-219ENST00000533660 PPFIA3O75145 1194 aa7.62□□□□□ -1.19
MS4A6A-219ENST00000533660 VEGFBP49765 207 aa7.62□□□□□ -1.19
MS4A6A-219ENST00000533660 BRPF1P55201 1214 aaPredicted RBP7.62□□□□□ -1.19
MS4A6A-219ENST00000533660 ZSCAN1Q8NBB4 408 aa7.62□□□□□ -1.19
MS4A6A-219ENST00000533660 GJD4Q96KN9 370 aaPredicted RBP7.62□□□□□ -1.19
MS4A6A-219ENST00000533660 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
MS4A6A-219ENST00000533660 CBLBQ13191 982 aa7.61□□□□□ -1.19
MS4A6A-219ENST00000533660 IL27Q8NEV9 243 aa7.61□□□□□ -1.19
MS4A6A-219ENST00000533660 APBB1O00213 710 aa7.6□□□□□ -1.19
MS4A6A-219ENST00000533660 NANOS1Q8WY41 292 aaKnown RBP7.6□□□□□ -1.19
MS4A6A-219ENST00000533660 LILRA1O75019 489 aa7.59□□□□□ -1.19
MS4A6A-219ENST00000533660 ADH1AP07327 375 aa7.59□□□□□ -1.19
MS4A6A-219ENST00000533660 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
MS4A6A-219ENST00000533660 PTSQ03393 145 aa7.58□□□□□ -1.2
MS4A6A-219ENST00000533660 ZNF784Q8NCA9 323 aaPredicted RBP7.58□□□□□ -1.2
MS4A6A-219ENST00000533660 RNF20Q5VTR2 975 aa7.57□□□□□ -1.2
MS4A6A-219ENST00000533660 ZNF330Q9Y3S2 320 aaPredicted RBP7.57□□□□□ -1.2
MS4A6A-219ENST00000533660 SLC35F4A4IF30 521 aa7.56□□□□□ -1.2
MS4A6A-219ENST00000533660 FBXO45P0C2W1 286 aa7.56□□□□□ -1.2
MS4A6A-219ENST00000533660 TMPRSS4Q9NRS4 437 aa7.56□□□□□ -1.2
MS4A6A-219ENST00000533660 PTGIRP43119 386 aa7.55□□□□□ -1.2
MS4A6A-219ENST00000533660 NR1H3Q13133 447 aa7.55□□□□□ -1.2
MS4A6A-219ENST00000533660 RNF217Q8TC41 542 aa7.55□□□□□ -1.2
MS4A6A-219ENST00000533660 GPC1P35052 558 aa7.54□□□□□ -1.2
MS4A6A-219ENST00000533660 CTSOP43234 321 aaPredicted RBP7.54□□□□□ -1.2
MS4A6A-219ENST00000533660 RELBQ01201 579 aa7.54□□□□□ -1.2
MS4A6A-219ENST00000533660 CCDC155Q8N6L0 562 aa7.54□□□□□ -1.2
MS4A6A-219ENST00000533660 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
MS4A6A-219ENST00000533660 AGBL1Q96MI9 1066 aa7.54□□□□□ -1.2
MS4A6A-219ENST00000533660 INSM2Q96T92 566 aaPredicted RBP7.54□□□□□ -1.2
MS4A6A-219ENST00000533660 NDUFB9Q9Y6M9 179 aa7.54□□□□□ -1.2
MS4A6A-219ENST00000533660 ADD1P35611 737 aaKnown RBP7.53□□□□□ -1.2
MS4A6A-219ENST00000533660 MTMR14Q8NCE2 650 aa7.53□□□□□ -1.2
MS4A6A-219ENST00000533660 PCDHB9Q9Y5E1 797 aa7.53□□□□□ -1.2
MS4A6A-219ENST00000533660 FIGNL2A6NMB9 653 aa7.52□□□□□ -1.21
MS4A6A-219ENST00000533660 ITGA6P23229 1130 aa7.52□□□□□ -1.21
MS4A6A-219ENST00000533660 RNF144AP50876 292 aaPredicted RBP7.52□□□□□ -1.21
MS4A6A-219ENST00000533660 ERVK-9P63128 1117 aa7.52□□□□□ -1.21
MS4A6A-219ENST00000533660 POLMQ9NP87 494 aaPredicted RBP7.52□□□□□ -1.21
MS4A6A-219ENST00000533660 GPR37L1O60883 481 aa7.51□□□□□ -1.21
MS4A6A-219ENST00000533660 GIGYF1O75420 1035 aaPredicted RBP7.51□□□□□ -1.21
MS4A6A-219ENST00000533660 FOXD4L5Q5VV16 416 aaPredicted RBP7.51□□□□□ -1.21
MS4A6A-219ENST00000533660 ATP5J2-PTCD1G3V325 749 aa7.5□□□□□ -1.21
MS4A6A-219ENST00000533660 RAB15P59190 212 aa7.5□□□□□ -1.21
MS4A6A-219ENST00000533660 CC2D2BQ6DHV5 1058 aa7.5□□□□□ -1.21
MS4A6A-219ENST00000533660 GMCL1Q96IK5 515 aa7.5□□□□□ -1.21
MS4A6A-219ENST00000533660 ZNF395Q9H8N7 513 aaPredicted RBP7.5□□□□□ -1.21
MS4A6A-219ENST00000533660 SENP3-EIF4A1A0A087X0R7 540 aa7.49□□□□□ -1.21
MS4A6A-219ENST00000533660 LYSMD3Q7Z3D4 306 aa7.49□□□□□ -1.21
MS4A6A-219ENST00000533660 PRM3Q9NNZ6 103 aa7.49□□□□□ -1.21
MS4A6A-219ENST00000533660 CYLDQ9NQC7 956 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms