RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 OVOS2A0A0J9YW53 1432 aa12.45□□□□□ -0.42
COPB1-210ENST00000533533 OVOS2Q6IE36 1432 aa12.45□□□□□ -0.42
COPB1-210ENST00000533533 RGPD3A6NKT7 1758 aaPredicted RBP12.45□□□□□ -0.42
COPB1-210ENST00000533533 RGPD4Q7Z3J3 1758 aa12.45□□□□□ -0.42
COPB1-210ENST00000533533 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
COPB1-210ENST00000533533 LRRC37A3O60309 1634 aa12.44□□□□□ -0.42
COPB1-210ENST00000533533 DDB1Q16531 1140 aa12.44□□□□□ -0.42
COPB1-210ENST00000533533 TOM1L2Q6ZVM7 507 aa12.44□□□□□ -0.42
COPB1-210ENST00000533533 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
COPB1-210ENST00000533533 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
COPB1-210ENST00000533533 PLSCR1O15162 318 aa12.43□□□□□ -0.42
COPB1-210ENST00000533533 SPON1Q9HCB6 807 aa12.43□□□□□ -0.42
COPB1-210ENST00000533533 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
COPB1-210ENST00000533533 KAT6BQ8WYB5 2073 aa12.42□□□□□ -0.42
COPB1-210ENST00000533533 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
COPB1-210ENST00000533533 WDR17Q8IZU2 1322 aa12.42□□□□□ -0.42
COPB1-210ENST00000533533 KCNQ2O43526 872 aa12.42□□□□□ -0.42
COPB1-210ENST00000533533 L3MBTL2Q969R5 705 aa12.42□□□□□ -0.42
COPB1-210ENST00000533533 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
COPB1-210ENST00000533533 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
COPB1-210ENST00000533533 TRPM1Q7Z4N2 1603 aa12.41□□□□□ -0.42
COPB1-210ENST00000533533 CPSF1Q10570 1443 aaKnown RBP12.41□□□□□ -0.42
COPB1-210ENST00000533533 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
COPB1-210ENST00000533533 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
COPB1-210ENST00000533533 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
COPB1-210ENST00000533533 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
COPB1-210ENST00000533533 PTF1AQ7RTS3 328 aa12.4□□□□□ -0.42
COPB1-210ENST00000533533 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.42
COPB1-210ENST00000533533 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.42
COPB1-210ENST00000533533 KCNH5Q8NCM2 988 aa12.4□□□□□ -0.42
COPB1-210ENST00000533533 TONSLQ96HA7 1378 aa12.4□□□□□ -0.42
COPB1-210ENST00000533533 UTRNP46939 3433 aa12.39□□□□□ -0.43
COPB1-210ENST00000533533 BCL9O00512 1426 aa12.39□□□□□ -0.43
COPB1-210ENST00000533533 YY1P25490 414 aa12.39□□□□□ -0.43
COPB1-210ENST00000533533 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
COPB1-210ENST00000533533 CARD10Q9BWT7 1032 aa12.39□□□□□ -0.43
COPB1-210ENST00000533533 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
COPB1-210ENST00000533533 NINLQ9Y2I6 1382 aa12.39□□□□□ -0.43
COPB1-210ENST00000533533 CASZ1Q86V15 1759 aa12.38□□□□□ -0.43
COPB1-210ENST00000533533 SOX12O15370 315 aa12.38□□□□□ -0.43
COPB1-210ENST00000533533 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
COPB1-210ENST00000533533 PROM2Q8N271 834 aa12.38□□□□□ -0.43
COPB1-210ENST00000533533 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
COPB1-210ENST00000533533 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
COPB1-210ENST00000533533 ROCK2O75116 1388 aaKnown RBP12.37□□□□□ -0.43
COPB1-210ENST00000533533 NFAT5O94916 1531 aa12.37□□□□□ -0.43
COPB1-210ENST00000533533 EXOC5O00471 708 aa12.36□□□□□ -0.43
COPB1-210ENST00000533533 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
COPB1-210ENST00000533533 MON2Q7Z3U7 1717 aa12.35□□□□□ -0.43
COPB1-210ENST00000533533 PDGFDQ9GZP0 370 aaPredicted RBP12.35□□□□□ -0.43
COPB1-210ENST00000533533 ABCC6O95255 1503 aa12.35□□□□□ -0.43
COPB1-210ENST00000533533 CCDC7Q96M83 1385 aa12.34□□□□□ -0.43
COPB1-210ENST00000533533 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
COPB1-210ENST00000533533 ZBTB7AO95365 584 aa12.33□□□□□ -0.44
COPB1-210ENST00000533533 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
COPB1-210ENST00000533533 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
COPB1-210ENST00000533533 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
COPB1-210ENST00000533533 PTGER2P43116 358 aa12.32□□□□□ -0.44
COPB1-210ENST00000533533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
COPB1-210ENST00000533533 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
COPB1-210ENST00000533533 LTN1O94822 1766 aa12.32□□□□□ -0.44
COPB1-210ENST00000533533 MYOM1P52179 1685 aa12.32□□□□□ -0.44
COPB1-210ENST00000533533 NHSQ6T4R5 1651 aa12.32□□□□□ -0.44
COPB1-210ENST00000533533 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
COPB1-210ENST00000533533 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
COPB1-210ENST00000533533 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
COPB1-210ENST00000533533 ERBB3P21860 1342 aa12.31□□□□□ -0.44
COPB1-210ENST00000533533 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
COPB1-210ENST00000533533 NLRP2Q9NX02 1062 aa12.3□□□□□ -0.44
COPB1-210ENST00000533533 CHD4Q14839 1912 aa12.29□□□□□ -0.44
COPB1-210ENST00000533533 CD163L1Q9NR16 1453 aa12.29□□□□□ -0.44
COPB1-210ENST00000533533 NME9Q86XW9 330 aa12.29□□□□□ -0.44
COPB1-210ENST00000533533 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
COPB1-210ENST00000533533 BTAF1O14981 1849 aa12.29□□□□□ -0.44
COPB1-210ENST00000533533 CLSPNQ9HAW4 1339 aa12.29□□□□□ -0.44
COPB1-210ENST00000533533 IL2RBP14784 551 aa12.28□□□□□ -0.44
COPB1-210ENST00000533533 TMC1Q8TDI8 760 aa12.28□□□□□ -0.44
COPB1-210ENST00000533533 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
COPB1-210ENST00000533533 HDGFL2Q7Z4V5 671 aaPredicted RBP12.27□□□□□ -0.45
COPB1-210ENST00000533533 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
COPB1-210ENST00000533533 SYT17Q9BSW7 474 aa12.27□□□□□ -0.45
COPB1-210ENST00000533533 CARD11Q9BXL7 1154 aa12.27□□□□□ -0.45
COPB1-210ENST00000533533 FHDC1Q9C0D6 1143 aaPredicted RBP12.27□□□□□ -0.45
COPB1-210ENST00000533533 SLC12A5Q9H2X9 1139 aa12.27□□□□□ -0.45
COPB1-210ENST00000533533 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
COPB1-210ENST00000533533 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
COPB1-210ENST00000533533 ANKRD24Q8TF21 1146 aa12.26□□□□□ -0.45
COPB1-210ENST00000533533 EDC4Q6P2E9 1401 aaKnown RBP12.26□□□□□ -0.45
COPB1-210ENST00000533533 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
COPB1-210ENST00000533533 TERF2IPQ9NYB0 399 aa12.25□□□□□ -0.45
COPB1-210ENST00000533533 A0A1W2PP64 1363 aa12.24□□□□□ -0.45
COPB1-210ENST00000533533 FAM208AQ9UK61 1670 aaKnown RBP12.23□□□□□ -0.45
COPB1-210ENST00000533533 ZNF827Q17R98 1081 aa12.23□□□□□ -0.45
COPB1-210ENST00000533533 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
COPB1-210ENST00000533533 IP6K1Q92551 441 aa12.23□□□□□ -0.45
COPB1-210ENST00000533533 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
COPB1-210ENST00000533533 ARXQ96QS3 562 aa12.23□□□□□ -0.45
COPB1-210ENST00000533533 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
COPB1-210ENST00000533533 QSER1Q2KHR3 1735 aa12.22□□□□□ -0.45
COPB1-210ENST00000533533 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms